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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000172_pilon:697532..699376+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041356 ID=XLOC_041356|Name=XLOC_041356|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1845bp|location=Sequence derived from alignment at sc0000172_pilon:697532..699376+ (Clytia hemisphaerica_ch_hm2_pilon)
AACAATGGCTCCAGCGTAAAAGAAGTTGATAGCGATAAAGCACCATACAT
AGTATTGGTTGGCAATGTAGGAAGTGGGAAATCAACCATCGTTGAAAAAC
TAGCAGGTGTTGATGGTCGAAGCTCTTCATCAGCATCCAGTGCAACCAGA
TCTGCTGAATATTTCTTGACTCCTGATCAAAGTCTTCTCATTGCTGACAC
TCCAGGAACCAATCCTCGAAAGGATAAACTGGAACATAATAATGAGATTG
CAGCTGCATTGAGTTATCGAGAGGTTTCCAAATTCATAGTAGTTGTGAAA
GCAAGTCTACGTATGGACCAGACACTGGATGATATAAAGCAGTATTATGA
TCGATTTAATGCTCTCCCTGAAGATCTTGTCGGTGTTTTGGTGACTCATA
TGGATCTCCACAAAGAATGGGATGAGGAAGAAATATTGGAAGCTATTGAC
GAGGACTTCGAAATTACAGACGTCGTTTTCTCAGATCGCCaaaaaaaGGG
TTTCGACCTTTGCAAAGATGTTTTAAGAACATGCAGAAAAACTTTTGTAA
TAGATATGCAGAGTGACCTGTTTTCAAGACTTTTCAGGTTTAAGGATAGT
AAtcgaaaaattctaaaagtcaCAAATGACTTCGTTAAACGATTTAAATC
actcaaaaaaagttttgaggGTCAGAGAAAGAACTTCGATGAAGCAGATC
GGTGTCATCTTGATTGCGAGTTCTGGGCACTGTTCAAAACACATCTTACC
GAAACAGCAAAACAGGACATGGTAAAtgaattgaatttcaattttgagaG
GGAGACGAAAGATATGGAGGAAGGCTATCTGATGAACATGGTCAATCAAA
CTAACGCCGCAATGAATGACATACAAATTCGAATCGCTCGAAATCAAGAT
CCCTATGCATCCACCAAAAATTGCCCTCATTGCGGTAGGATTTGTGAAAA
TCCAAAAGCTCAAACATGTGGTAAACCAAAGCGTATTGAGCTGTCAACAA
ATTCTCCATGTACAATGGCACATTTTACATTTAAAATCATTGACTACAGA
AAAGTCGAAatacagaaaaaaagttttggtggTCAATTTCAGGATAACAA
GACAGGATGTGGTCAAAAAATCAGCTGGAATGAAATGATGAAAGTTaatc
atcaaaaaatcacaCAGATACAAAATCAGGGTCCAGTAAAACAACCTGAA
TCTAATCAGCGTCCAGTGGAACAACCTAAATCTGACCATCACGCAGATAC
AAAAAGCAGACAAAAGACCAAGCCCAAAAATCAACAGCCATTAAGTACAA
GTGACACACAACGCATCAATCATGGTAGATCTCTACCAAAGAAGAATCCT
ACAAAGCATACTCATACAGAACCACCCAGATATGTACACCAAAAAGAAGA
GGCTCCGAATCAATCTTCACAACCCAACAAAGGTGGAAGACAGAGATCAA
ACAACGACTTTAACCAAAACAATAAGTCGGCGAAGTACCACCCATATGAC
TATTCAGAAGAGGCTCCGAATCAATCTTCACAACCCAACAAAGGTGGAAG
ACAGAAACCAAACAACGACTCAAACCAAAACAATAAGTCGGCGAAATACC
ACCCATATGACTATCCAGAAGAGActctgaaccaatttacacAACCCAGC
AAAGGTGAAAGAGGTATTTCAAACAACGACTCAAACCAAAACAATAAGTC
GAGGAAATATCCACCAAAGGACTATCCACAAGAGACTCTGAATCAATCTT
CACAACCCAGCAAAGGTGAAAGAGGCAGATCAAACAACGACTCAAACCAA
AACAATAGATCGAAGAAGTACCCACCAAAGGACAAACCAGAAGAT Coding sequence (CDS) from alignment at sc0000172_pilon:697532..699376+ >XLOC_041356 ID=XLOC_041356|Name=XLOC_041356|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3690bp|location=Sequence derived from alignment at sc0000172_pilon:697532..699376+ (Clytia hemisphaerica_ch_hm2_pilon)
AACAATGGCTCCAGCGTAAAAGAAGTTGATAGCGATAAAGCACCATACAT
AGTATTGGTTGGCAATGTAGGAAGTGGGAAATCAACCATCGTTGAAAAAC
TAGCAGGTGTTGATGGTCGAAGCTCTTCATCAGCATCCAGTGCAACCAGA
TCTGCTGAATATTTCTTGACTCCTGATCAAAGTCTTCTCATTGCTGACAC
TCCAGGAACCAATCCTCGAAAGGATAAACTGGAACATAATAATGAGATTG
CAGCTGCATTGAGTTATCGAGAGGTTTCCAAATTCATAGTAGTTGTGAAA
GCAAGTCTACGTATGGACCAGACACTGGATGATATAAAGCAGTATTATGA
TCGATTTAATGCTCTCCCTGAAGATCTTGTCGGTGTTTTGGTGACTCATA
TGGATCTCCACAAAGAATGGGATGAGGAAGAAATATTGGAAGCTATTGAC
GAGGACTTCGAAATTACAGACGTCGTTTTCTCAGATCGCCaaaaaaaGGG
TTTCGACCTTTGCAAAGATGTTTTAAGAACATGCAGAAAAACTTTTGTAA
TAGATATGCAGAGTGACCTGTTTTCAAGACTTTTCAGGTTTAAGGATAGT
AAtcgaaaaattctaaaagtcaCAAATGACTTCGTTAAACGATTTAAATC
actcaaaaaaagttttgaggGTCAGAGAAAGAACTTCGATGAAGCAGATC
GGTGTCATCTTGATTGCGAGTTCTGGGCACTGTTCAAAACACATCTTACC
GAAACAGCAAAACAGGACATGGTAAAtgaattgaatttcaattttgagaG
GGAGACGAAAGATATGGAGGAAGGCTATCTGATGAACATGGTCAATCAAA
CTAACGCCGCAATGAATGACATACAAATTCGAATCGCTCGAAATCAAGAT
CCCTATGCATCCACCAAAAATTGCCCTCATTGCGGTAGGATTTGTGAAAA
TCCAAAAGCTCAAACATGTGGTAAACCAAAGCGTATTGAGCTGTCAACAA
ATTCTCCATGTACAATGGCACATTTTACATTTAAAATCATTGACTACAGA
AAAGTCGAAatacagaaaaaaagttttggtggTCAATTTCAGGATAACAA
GACAGGATGTGGTCAAAAAATCAGCTGGAATGAAATGATGAAAGTTaatc
atcaaaaaatcacaCAGATACAAAATCAGGGTCCAGTAAAACAACCTGAA
TCTAATCAGCGTCCAGTGGAACAACCTAAATCTGACCATCACGCAGATAC
AAAAAGCAGACAAAAGACCAAGCCCAAAAATCAACAGCCATTAAGTACAA
GTGACACACAACGCATCAATCATGGTAGATCTCTACCAAAGAAGAATCCT
ACAAAGCATACTCATACAGAACCACCCAGATATGTACACCAAAAAGAAGA
GGCTCCGAATCAATCTTCACAACCCAACAAAGGTGGAAGACAGAGATCAA
ACAACGACTTTAACCAAAACAATAAGTCGGCGAAGTACCACCCATATGAC
TATTCAGAAGAGGCTCCGAATCAATCTTCACAACCCAACAAAGGTGGAAG
ACAGAAACCAAACAACGACTCAAACCAAAACAATAAGTCGGCGAAATACC
ACCCATATGACTATCCAGAAGAGActctgaaccaatttacacAACCCAGC
AAAGGTGAAAGAGGTATTTCAAACAACGACTCAAACCAAAACAATAAGTC
GAGGAAATATCCACCAAAGGACTATCCACAAGAGACTCTGAATCAATCTT
CACAACCCAGCAAAGGTGAAAGAGGCAGATCAAACAACGACTCAAACCAA
AACAATAGATCGAAGAAGTACCCACCAAAGGACAAACCAGAAGATAACAA
TGGCTCCAGCGTAAAAGAAGTTGATAGCGATAAAGCACCATACATAGTAT
TGGTTGGCAATGTAGGAAGTGGGAAATCAACCATCGTTGAAAAACTAGCA
GGTGTTGATGGTCGAAGCTCTTCATCAGCATCCAGTGCAACCAGATCTGC
TGAATATTTCTTGACTCCTGATCAAAGTCTTCTCATTGCTGACACTCCAG
GAACCAATCCTCGAAAGGATAAACTGGAACATAATAATGAGATTGCAGCT
GCATTGAGTTATCGAGAGGTTTCCAAATTCATAGTAGTTGTGAAAGCAAG
TCTACGTATGGACCAGACACTGGATGATATAAAGCAGTATTATGATCGAT
TTAATGCTCTCCCTGAAGATCTTGTCGGTGTTTTGGTGACTCATATGGAT
CTCCACAAAGAATGGGATGAGGAAGAAATATTGGAAGCTATTGACGAGGA
CTTCGAAATTACAGACGTCGTTTTCTCAGATCGCCaaaaaaaGGGTTTCG
ACCTTTGCAAAGATGTTTTAAGAACATGCAGAAAAACTTTTGTAATAGAT
ATGCAGAGTGACCTGTTTTCAAGACTTTTCAGGTTTAAGGATAGTAAtcg
aaaaattctaaaagtcaCAAATGACTTCGTTAAACGATTTAAATCactca
aaaaaagttttgaggGTCAGAGAAAGAACTTCGATGAAGCAGATCGGTGT
CATCTTGATTGCGAGTTCTGGGCACTGTTCAAAACACATCTTACCGAAAC
AGCAAAACAGGACATGGTAAAtgaattgaatttcaattttgagaGGGAGA
CGAAAGATATGGAGGAAGGCTATCTGATGAACATGGTCAATCAAACTAAC
GCCGCAATGAATGACATACAAATTCGAATCGCTCGAAATCAAGATCCCTA
TGCATCCACCAAAAATTGCCCTCATTGCGGTAGGATTTGTGAAAATCCAA
AAGCTCAAACATGTGGTAAACCAAAGCGTATTGAGCTGTCAACAAATTCT
CCATGTACAATGGCACATTTTACATTTAAAATCATTGACTACAGAAAAGT
CGAAatacagaaaaaaagttttggtggTCAATTTCAGGATAACAAGACAG
GATGTGGTCAAAAAATCAGCTGGAATGAAATGATGAAAGTTaatcatcaa
aaaatcacaCAGATACAAAATCAGGGTCCAGTAAAACAACCTGAATCTAA
TCAGCGTCCAGTGGAACAACCTAAATCTGACCATCACGCAGATACAAAAA
GCAGACAAAAGACCAAGCCCAAAAATCAACAGCCATTAAGTACAAGTGAC
ACACAACGCATCAATCATGGTAGATCTCTACCAAAGAAGAATCCTACAAA
GCATACTCATACAGAACCACCCAGATATGTACACCAAAAAGAAGAGGCTC
CGAATCAATCTTCACAACCCAACAAAGGTGGAAGACAGAGATCAAACAAC
GACTTTAACCAAAACAATAAGTCGGCGAAGTACCACCCATATGACTATTC
AGAAGAGGCTCCGAATCAATCTTCACAACCCAACAAAGGTGGAAGACAGA
AACCAAACAACGACTCAAACCAAAACAATAAGTCGGCGAAATACCACCCA
TATGACTATCCAGAAGAGActctgaaccaatttacacAACCCAGCAAAGG
TGAAAGAGGTATTTCAAACAACGACTCAAACCAAAACAATAAGTCGAGGA
AATATCCACCAAAGGACTATCCACAAGAGACTCTGAATCAATCTTCACAA
CCCAGCAAAGGTGAAAGAGGCAGATCAAACAACGACTCAAACCAAAACAA
TAGATCGAAGAAGTACCCACCAAAGGACAAACCAGAAGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000172_pilon | genome | sc0000172_pilon:697532..699376 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1845:1 |
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