|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000172_pilon:705921..707791- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041355 ID=XLOC_041355|Name=XLOC_041355|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1871bp|location=Sequence derived from alignment at sc0000172_pilon:705921..707791- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAACTAAGGAAAAAGGAAAACAAAAAGCTAGCAAGGCACAGCAGGC
GGCTGAAGCTCTTTCAAAAGAAGTTCTATCAAAAGGTTTTCTTGCCAGTG
AGTAAATTTTATTAGACACCCCTGTCTCAGTGAACTGGTTGTGAGCAGTT
GCTTGTGGGCGGGGTAACAGTACTTCGAGGGTAGGCATTAGTCTTTTAAA
TCAACCCTTACGGCGTGCTTTTCTTTGAAGCTTTTTTAAGGCAAGAAAAT
GAACAGATTTTCCAAAATGTTGCCCAAAAACTTCGTATTTCTGAATTTTT
ACACCCTTAGAGTTTACTTTCTCTCGTTTTGACCCTTGCAGTGCATTTTG
GGAAGCCTGGAAAACGCGCGGTTAATAATTAAGACAAAACTTATTTTTTC
AAAGTTTTCTACATTTTTAGAGAGTCTGTCCGAAATTGAAGATGTTGACG
AAAGCAAATCACCATATGTGGTGTTTGTGGGCAATGTTGGTGTTGGAAAG
TCGACTGTAACAGAAAAGTTAACTGGAGAAGTAGGCCGAAGCTCAGCATC
AAGTTCCAGTAGTACGACTACAGCAGAGTACTTTTGGGTGGCGGACAAAA
GTCTTCTGATAGCAGATACGCCAGGAAGTAATCCCCGTGTTAGCCAGAAA
TTTGATCACAACCTTGAAATTGCTGCAGCTTTGAATTATAGGAATGTCTC
CAAACTGTTGATTGTTGTTAAAGCTTCAGTAAGGATGGATCAAACACTGG
CCGATATTAACGAGTATGTTAACAGGTTTGTCGCTCTGCCTGATGATCTT
GTAGGAGTTCTTGTCACACACATGGATACCAAGATCGAATGGAAAGAGGA
AGATTTGAGGAAAGCGTGCGAGGAAGACTTTGGTATCGAGGATATCGTTT
TTTCTCACCAAAATATGCCAGGAAAGTTCATTCAAACACGTATTTTGAAA
GTTTGTAATGGAGAACCATTTAAGCTAGATATTGACGGTCGATTATTTTT
ACGACTATTCAATATTCAGGGAAACAAAAAGAAAGTTCTCAAATTGACCA
ATGACATTGTGGATAGATTCAAGCAGTATAAGCAATGTTTTGAAGACGAA
AGAAAGAAATTTAGTCCTGAAGAACAAGCAGATCTTTTCTTTGAGTATAA
AGCCTTTATGGAATTGCAAGTAGATGAGTCTCGAAAAGAATTATGCCAAA
AACTTGGTATTGACTTCTGTCACGAGGATGATAAGGTCAATATTCAGCAT
GCAGGATATGTAGCAAACATGGTCAACCAACTTCGTGCTGTTATCTTTGA
TATTCGTATTGAAGCATTGAAATATCATAATAACCATGGTTGCAGTGATC
TACGGGAATGTCCAGTCTGTGGTTGTGTTTGGGCCAAAGTTGAAGGTTGT
GATGGATGGACGACATGTGGATCAATACCCACCACTGTTAGCGATGTCAA
TCGTGATGTTTTTGAGATGGCAACATTCAACTTTAAAGTGGTCCAAGTTA
ACCAAAATGAAGTCAAATTCGAAATCATGTCTAATGGAAAGAAAAATATC
AAAATGGATGGATTGAATGCTACAATTGATGCTGCGTTCGATGAAGCAAT
TGCCAAGATGGATCTCTCAGAATTTCAAGTAATAGGAGATAAAGTATTCA
TGAATGTCCCAAAAGAATGTTCAAACTTGTATCAAGGTACAAAGGGATGT
CATCAGGTCATTCATTGGGACTACATGAAAAAGGTAGAAGCACCAGGTGA
ATTTCACGTCAAAGATGAAACTCAACATGTTAATGTTGATGATATAATGA
CTTTGCCAAAGGAAGCAAAAAGTGTTTTCGATGTTATCGATCGACAGTTG
AAAGCTAAGAGAAAGAATTGA Coding sequence (CDS) from alignment at sc0000172_pilon:705921..707791- >XLOC_041355 ID=XLOC_041355|Name=XLOC_041355|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3096bp|location=Sequence derived from alignment at sc0000172_pilon:705921..707791- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAACTAAGGAAAAAGGAAAACAAAAAGCTAGCAAGGCACAGCAGGC
GGCTGAAGCTCTTTCAAAAGAAGTTCTATCAAAAGGTTTTCTTGCCAATG
TCAACTAAGGAAAAAGGAAAACAAAAAGCTAGCAAGGCACAGCAGGCGGC
TGAAGCTCTTTCAAAAGAAGTTCTATCAAAAGGTTTTCTTGCCAAGAGTC
TGTCCGAAATTGAAGATGTTGACGAAAGCAAATCACCATATGTGGTGTTT
GTGGGCAATGTTGGTGTTGGAAAGTCGACTGTAACAGAAAAGTTAACTGG
AGAAGTAGGCCGAAGCTCAGCATCAAGTTCCAGTAGTACGACTACAGCAG
AGTACTTTTGGGTGGCGGACAAAAGTCTTCTGATAGCAGATACGCCAGGA
AGTAATCCCCGTGTTAGCCAGAAATTTGATCACAACCTTGAAATTGCTGC
AGCTTTGAATTATAGGAATGTCTCCAAACTGTTGATTGTTGTTAAAGCTT
CAGTAAGGATGGATCAAACACTGGCCGATATTAACGAGTATGTTAACAGG
TTTGTCGCTCTGCCTGATGATCTTGTAGGAGTTCTTGTCACACACATGGA
TACCAAGATCGAATGGAAAGAGGAAGATTTGAGGAAAGCGTGCGAGGAAG
ACTTTGGTATCGAGGATATCGTTTTTTCTCACCAAAATATGCCAGGAAAG
TTCATTCAAACACGTATTTTGAAAGTTTGTAATGGAGAACCATTTAAGCT
AGATATTGACGGTCGATTATTTTTACGACTATTCAATATTCAGGGAAACA
AAAAGAAAGTTCTCAAATTGACCAATGACATTGTGGATAGATTCAAGCAG
TATAAGCAATGTTTTGAAGACGAAAGAAAGAAATTTAGTCCTGAAGAACA
AGCAGATCTTTTCTTTGAGTATAAAGCCTTTATGGAATTGCAAGTAGATG
AGTCTCGAAAAGAATTATGCCAAAAACTTGGTATTGACTTCTGTCACGAG
GATGATAAGGTCAATATTCAGCATGCAGGATATGTAGCAAACATGGTCAA
CCAACTTCGTGCTGTTATCTTTGATATTCGTATTGAAGCATTGAAATATC
ATAATAACCATGGTTGCAGTGATCTACGGGAATGTCCAGTCTGTGGTTGT
GTTTGGGCCAAAGTTGAAGGTTGTGATGGATGGACGACATGTGGATCAAT
ACCCACCACTGTTAGCGATGTCAATCGTGATGTTTTTGAGATGGCAACAT
TCAACTTTAAAGTGGTCCAAGTTAACCAAAATGAAGTCAAATTCGAAATC
ATGTCTAATGGAAAGAAAAATATCAAAATGGATGGATTGAATGCTACAAT
TGATGCTGCGTTCGATGAAGCAATTGCCAAGATGGATCTCTCAGAATTTC
AAGTAATAGGAGATAAAGTATTCATGAATGTCCCAAAAGAATGTTCAAAC
TTGTATCAAGGTACAAAGGGATGTCATCAGGTCATTCATTGGGACTACAT
GAAAAAGGTAGAAGCACCAGGTGAATTTCACGTCAAAGATGAAACTCAAC
ATGTTAATGTTGATGATATAATGACTTTGCCAAAGGAAGCAAAAAGTGTT
TTCGATGTTATCGATCGACAGTTGAAAGCTAAGAGAAAGAATTGAAGAGT
CTGTCCGAAATTGAAGATGTTGACGAAAGCAAATCACCATATGTGGTGTT
TGTGGGCAATGTTGGTGTTGGAAAGTCGACTGTAACAGAAAAGTTAACTG
GAGAAGTAGGCCGAAGCTCAGCATCAAGTTCCAGTAGTACGACTACAGCA
GAGTACTTTTGGGTGGCGGACAAAAGTCTTCTGATAGCAGATACGCCAGG
AAGTAATCCCCGTGTTAGCCAGAAATTTGATCACAACCTTGAAATTGCTG
CAGCTTTGAATTATAGGAATGTCTCCAAACTGTTGATTGTTGTTAAAGCT
TCAGTAAGGATGGATCAAACACTGGCCGATATTAACGAGTATGTTAACAG
GTTTGTCGCTCTGCCTGATGATCTTGTAGGAGTTCTTGTCACACACATGG
ATACCAAGATCGAATGGAAAGAGGAAGATTTGAGGAAAGCGTGCGAGGAA
GACTTTGGTATCGAGGATATCGTTTTTTCTCACCAAAATATGCCAGGAAA
GTTCATTCAAACACGTATTTTGAAAGTTTGTAATGGAGAACCATTTAAGC
TAGATATTGACGGTCGATTATTTTTACGACTATTCAATATTCAGGGAAAC
AAAAAGAAAGTTCTCAAATTGACCAATGACATTGTGGATAGATTCAAGCA
GTATAAGCAATGTTTTGAAGACGAAAGAAAGAAATTTAGTCCTGAAGAAC
AAGCAGATCTTTTCTTTGAGTATAAAGCCTTTATGGAATTGCAAGTAGAT
GAGTCTCGAAAAGAATTATGCCAAAAACTTGGTATTGACTTCTGTCACGA
GGATGATAAGGTCAATATTCAGCATGCAGGATATGTAGCAAACATGGTCA
ACCAACTTCGTGCTGTTATCTTTGATATTCGTATTGAAGCATTGAAATAT
CATAATAACCATGGTTGCAGTGATCTACGGGAATGTCCAGTCTGTGGTTG
TGTTTGGGCCAAAGTTGAAGGTTGTGATGGATGGACGACATGTGGATCAA
TACCCACCACTGTTAGCGATGTCAATCGTGATGTTTTTGAGATGGCAACA
TTCAACTTTAAAGTGGTCCAAGTTAACCAAAATGAAGTCAAATTCGAAAT
CATGTCTAATGGAAAGAAAAATATCAAAATGGATGGATTGAATGCTACAA
TTGATGCTGCGTTCGATGAAGCAATTGCCAAGATGGATCTCTCAGAATTT
CAAGTAATAGGAGATAAAGTATTCATGAATGTCCCAAAAGAATGTTCAAA
CTTGTATCAAGGTACAAAGGGATGTCATCAGGTCATTCATTGGGACTACA
TGAAAAAGGTAGAAGCACCAGGTGAATTTCACGTCAAAGATGAAACTCAA
CATGTTAATGTTGATGATATAATGACTTTGCCAAAGGAAGCAAAAAGTGT
TTTCGATGTTATCGATCGACAGTTGAAAGCTAAGAGAAAGAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000172_pilon | genome | sc0000172_pilon:705921..707791 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 100-1548:1450 |
| Aaloc | 1-96:1872 |
|
