XLOC_041330 (mRNA) -

Overview
NameXLOC_041330
Unique NameXLOC_041330
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000186_pilon:217369..218488+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041330 ID=XLOC_041330|Name=XLOC_041330|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1120bp|location=Sequence derived from alignment at sc0000186_pilon:217369..218488+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTTTTTGTTTGccaataaaaataagacttttcgTCCAAGGAGAAG TATCCCAGAAGGAACACATCAATATGATTTATTAAAACATGCTGAAGCTA CTCTTGGATCAGGAAATCTTCGAAATGCTGTGATGCTACCTGAAGTAtga ttttctttgatattttagcattttttagttGAAGAGGTTTACAGTATACA ACTCCTAtgtcttttttctcaaaaatgacgcTTTCGATAACTTTTGAACA CGTGACGCAAATTTgaagtatgatagctcaaaattcaagttagtcTTTCC TCCTTCGAATGGCAAAAAAGCTTGGATttataacattttcaattttctag aAAACTAACTTCaaacttgtacactttttttctgTATCACCCGGTACTTT TTATGGGACTTGTTTTATGTAGCagaattaatttttaaagtgtAAAGGTG TCGCAGCAGTGTTTTTGCAAAACTTATTTTGACaattgaaaatcattttc tgtTGAAGCTATTCACAACTTTTCAGTCACACTTAAATGTAAGCTTAGCT TAAAAAAGATTTGCCTTCctaaaaaatttgttgttgctAATATTTGTCTT TTCACCTTTTCAGGGCGAAGATCTAAATGAATGGGTTGCTGTCAATACCG TTGACTTCTTCAATCAAATTAATATGTTATATGGAACCATAACAGAAGAA TGCACCCCTGAAAGTTGTCCAGTCATGTCTGCTGGACCCAAATTTGAATA CCTTTGGGCTGATGGTACCTCTATTAAGAAGCCTGTAAAATGTTCTGCAC CGCAATATATTGATTACCTAATGCAATGGGTTCAGGATCAGCTTGATGAT GAGACCTTATTTCCGTCCAAGATTGGAGTACCATTCCCCAAGAATTTTTT GAGTATCGCTAAAACCATGTTAAAACGTCTGTTCCGTGTTTATGCTCATA TCTACCATCAACATTTCCCGCAAGTCGTCAGCTTGAAAGAAGAAGCTCAT TTGAATACGTCTTTCAAGCATTTTATCTACTTTGTGCAAGAGTTTAATTT GATTGAGAAAAGAGAGCTGGCTCCTTTGCAAGAATTGATCGATAGGCTAA TTAACAAAGCCTCTGCATAA

Coding sequence (CDS) from alignment at sc0000186_pilon:217369..218488+

>XLOC_041330 ID=XLOC_041330|Name=XLOC_041330|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1302bp|location=Sequence derived from alignment at sc0000186_pilon:217369..218488+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTTTTTGTTTGccaataaaaataagacttttcgTCCAAGGAGAAG
TATCCCAGAAGGAACACATCAATATGATTTATTAAAACATGCTGAAGCTA
CTCTTGGATCAGGAAATCTTCGAAATGCTGTGATGCTACCTGAAATGAGT
TTTTTGTTTGccaataaaaataagacttttcgTCCAAGGAGAAGTATCCC
AGAAGGAACACATCAATATGATTTATTAAAACATGCTGAAGCTACTCTTG
GATCAGGAAATCTTCGAAATGCTGTGATGCTACCTGAAGGCGAAGATCTA
AATGAATGGGTTGCTGTCAATACCGTTGACTTCTTCAATCAAATTAATAT
GTTATATGGAACCATAACAGAAGAATGCACCCCTGAAAGTTGTCCAGTCA
TGTCTGCTGGACCCAAATTTGAATACCTTTGGGCTGATGGTACCTCTATT
AAGAAGCCTGTAAAATGTTCTGCACCGCAATATATTGATTACCTAATGCA
ATGGGTTCAGGATCAGCTTGATGATGAGACCTTATTTCCGTCCAAGATTG
GAGTACCATTCCCCAAGAATTTTTTGAGTATCGCTAAAACCATGTTAAAA
CGTCTGTTCCGTGTTTATGCTCATATCTACCATCAACATTTCCCGCAAGT
CGTCAGCTTGAAAGAAGAAGCTCATTTGAATACGTCTTTCAAGCATTTTA
TCTACTTTGTGCAAGAGTTTAATTTGATTGAGAAAAGAGAGCTGGCTCCT
TTGCAAGAATTGATCGATAGGCTAATTAACAAAGCCTCTGCATAAGGCGA
AGATCTAAATGAATGGGTTGCTGTCAATACCGTTGACTTCTTCAATCAAA
TTAATATGTTATATGGAACCATAACAGAAGAATGCACCCCTGAAAGTTGT
CCAGTCATGTCTGCTGGACCCAAATTTGAATACCTTTGGGCTGATGGTAC
CTCTATTAAGAAGCCTGTAAAATGTTCTGCACCGCAATATATTGATTACC
TAATGCAATGGGTTCAGGATCAGCTTGATGATGAGACCTTATTTCCGTCC
AAGATTGGAGTACCATTCCCCAAGAATTTTTTGAGTATCGCTAAAACCAT
GTTAAAACGTCTGTTCCGTGTTTATGCTCATATCTACCATCAACATTTCC
CGCAAGTCGTCAGCTTGAAAGAAGAAGCTCATTTGAATACGTCTTTCAAG
CATTTTATCTACTTTGTGCAAGAGTTTAATTTGATTGAGAAAAGAGAGCT
GGCTCCTTTGCAAGAATTGATCGATAGGCTAATTAACAAAGCCTCTGCAT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041330XLOC_041330-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000186_pilongenomesc0000186_pilon:217369..218488 +
Properties
Property NameValue
Aaloc145-651:614
Aaloc1-144:1