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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000186_pilon:278497..283384+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041329 ID=XLOC_041329|Name=XLOC_041329|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4888bp|location=Sequence derived from alignment at sc0000186_pilon:278497..283384+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGCCTGCTGAGTATAACTCATCTCTCCAGCTTTACCTCTTTACCAGA
AAGGTATTAAAAACTGGCTGAAATCATAAAACTTATCTACATAGGTCTCA
TAAAACTATTTTAAGCTGATCTGCCTATAATGCCATAGAAGAAGCTCCAT
TGTGACTTATTTCTGGTCTGATTTGAGCTTTTACagcaaaagaaattgaa
aaggtATAACCAGTTAGTTTCAAGAtacaaaaagtttcaaagagTGTATG
AAAAGATTGGGCTGCCAAAATAAAGGATGTACACGAGGGGTTCTATTAAA
GAttctactttcatttttttccagtcTTTACAAAGAATTTCTGAATTTGA
ATCCCAACCGGTTGGTAAACTGTCTATCAGAAATGCAACAGAAGTATGAG
ATTGATTCATTCCTTCAGTTGGTCTTACAACTTTTCTGCAAGCATTTCAA
TGTTCAAGAACCAGAGATTGCTTCCAGTGCCATCGATATGCTTTTCATAC
ATTTAGAGCTTTCTGCAGAAATGCTTCATAAACCTTGCCAGTAAGTGCCT
TTTCTTAGAGTTATtaaaattgctttcaagaacTCTGAAGCCATGGGATA
GAGCCATCAGGAAGCCATAAAGAAGGCAGCTCTTAAGTAAATTGTATTTA
TAAAAATGGAGAAGAAATCCTATGAGAGCCAAGTCTTATATATTATAAGA
GGGATAATGTACATAATATGCCGGAGcaactttttaaaatagattttcat
ttaatttcagATACTTGGTTGATGCTTTTGTCAAATTAAACGATGACAAT
GAAAGTGCTGCTGAAGAATTAAGTAGACTGATCAAAATCATCTccaaaag
gtttgtttactaTCTTGATTTAATAAAACATTCTTTCACCATCAAAATAC
TACAGTGTTTAATGCATGGAAGGCTTTACTTACTAATAAGAAATAATCTT
GACAAGGTAAATCTGCTTTCCTCCAAAGTGTAGATTATGTTTTATGTAAT
GTACCTTCAGGgcaggggggggtcatgcagttattatataaacactatga
caattactaccgtggtggtatataaaccaaaatttgggaaaacagttact
ccaccagtggactaactgcaacatgggtggtgcctaagcccaaaattgtc
gattttggtaggatatggtgtactaagtgagcacatttttcaatttttca
cttaaaattttaggtttttaaaaaatttcggaagcaaaaaaattcaaaac
atttttttcaaaagtcaaaaaaaaatcaaatttttttcttcaatcaaggc
atgaaaaatattttaacaaatttggaaaatgattgagatatttaactctt
gaacggtcgttaataagacgtacccagtgaaatggtatcaaaaatgagga
attcagtaaaaaaattgccaaatttggcatttttgggggtggtatacacc
aattttgagggtaaaatcagttagtacactatggaataactgcaagggtg
gtggtgtctgtagaaaatgtccaaaattgcagttactccacatagtgtca
aggagtaactgcaagacccccccctgtTCAGGGAAGTAACTCtagtgaaa
actttttttgtggtACAATGGTACGAAGTAAGCAATTTTGCCAGCGTTTT
GCCAAAAGTTAGAATTTAAGTAAAACTGCTGGTTTTCACAGAACAAATTT
TTGAGGTAGACGACTGAAGCCACAAaaattagctcttacaaaaatgattt
cttaaaaaaattatttacgaTGAGTTAGTAATATAATTATTATAAACCAT
AATTACAAACGATATTTCCCTTAATAAGGTATGTCATTCTCATTTCATAG
ATTTCCAACAGCTTTTGATGGTTGCATTGATACAAAGTTCAAGGAGCATG
AAGAGAACCCATCAGCCATTGAACAACTAAAAATTTTAACCAGAATTTGC
TTGAGTGAAGAGAAATCAAAAGTGATAGGAAACGCTGAACTACCCCTTGT
TGTTTGCTTAAACCATCCTGAGAAACAGTTACGATTGATGGCTACAAAAC
AGCTGTTTGAGATTTTCAAATCTGGTGTTTATTCTGAAGATCCTTCATTC
TTTCAAGAGGGCGTCATCAGCAGATTGCAGGATGATGAGCCAGCTGTGGT
AAAAGAGTGTCTGAGCCATCCAAAATCACTTTTGAAGATTCTCTCTAAAG
ATGATGTCCATATTGTCTTGGAAAAGTTATCTGAGCGAGCTGATGATACC
TACAACTTGAGTCCCTTGTATATGAGGGTGTTACAAGATGTAGATCAAAA
TAGTACTGCtgatcaaaagttattcttCATGGTTTTATCTCAAGTTTTCA
CATCAATCACAAGTAAAAAATTAAAtgcagtttttgaatttttcaacaac
aaaGAGTATAACATCGACAATCACATCTTGAAAGCAATCAAAACCACACT
TTCATCCCATGGTGGTGTCAAAGTCAAAGATGAAGCCAAGTTACTACAGC
TTAATCGAACCTTGATGATGAACGTTGCAGAAAGTTATGATTTGGATTCA
TTCAAAATTCTTTGGCAGTTCCAGTCCTCTCTACATTCTGATCACATTCT
GAAATTTATCTCAAATCTGATCTTATTGATCAACACTTTATCTGGCAAAT
TTGGAGTAAATGAAGCTGCTTGTTTTGGACTGTCGAGAGATGTTGTTGCT
TCTCTTGATGTCGATAACTTTTTAGAGAATGACCCAGTTCCATTCATGTT
GGAAATGTTTGTAGATGGTATCAAACGAAATCGAAAGTTTGATGTTTCAT
TGACCAGTCTTTGTAATGCATTCTTTGTGAAGGTCTTGATCCAGAAAATT
TCAGGTCAGTCAACTTTCTCGTCTTTTTGATTGCCCTAAAGTTATAAGGT
TGTGTTCAAGTGCTGTCtctcaattattattttttatgtctgaTAGCTTT
GCCTTTTAACGTATTAACAGAATACTGAAGCAGATGCTATCAAATTAGAT
TTAATAATTCCTTTTTCTCAACAAACTGGCCTTGTACATTGGTTTAAAGC
TCCAAGTAATTTTAGTAGGATCTGTCTCACCTTAACGAAAGActgtttta
aaaaggtttcttaTTTTACAGAAAACAAAGATGAATTTGATGAAGTTAAA
CAGAACATCTTCAAGACCATTGTCCCTTTTGCTACCAATAAAAAGTCAAA
TGCTTTAAGCAACACTTGTCGTGAACTAACGAAAACGTTTTTCCAGGTAA
GAAGATAGCATCAGGAAAAATTGATGATTTGTAAAATTCataccatagtc
attataaaaaaaccccggtctggcaatgtcTTGTTTTacctttttgttca
attttcttttgttacaaacaaaagataagttgcgatttgcatactttttg
ataacgttaccaaaatctcctcttgggattggtctattttgtACATTAAC
TTGTAATCATAGCTATAAAAGTTGATGTTTTTGCTAAGAATATTTCATAC
ACTTTAAATTTATTTGTTCCATCTTTCAAGACATGTTTCCAAGATACAGA
ACAAGTCCGTCTGTTCACCGGCCAACTATGTATCAACGAACTATTTGCGA
ACCAAAACATCAGCAAGGtggatttggaaatttctttGAGCTGTTTATCA
ATTGTTGGTCTGTTGGTTGAAAGTGCTGAGAATGCATCAATCACTGATCT
GGGTATGAACGTAATATCGATAGTGATCTATTAAAATTCTGTTATAAAAG
AGGATGGTTGTGTTTGAAACTTCCAGAAATTGAATAAAGGGTATTGGGAG
TTAGCTATAGACGATGAGGACCAGGAATAAAGTCATATCTATCTGAAGGC
ttttgacttaacagaaatttgccaaaatttgacaaaattttctttttaaa
ttttgtaaattttgtttgaagagCTAGAAATGCAGCAAAGACTGTAAAAA
CGAACTTTTAGACTTACAatactttgtttttcaatttaagAAATTGGACT
ACAAATCGGCTTATTATCCTTCCCAAACAAGACAGTACGAGAAGTAGTGT
GCGACATAATGGCGAAATATGGTGAAGTATTGAAGTCAAATCATCCTTGG
TCATTCTTCACAAATCTTGTTGTGGAAAATACTAACGAAATCGTTTTGGA
TGATACCCATGCTAAAAggtaaaagaaattaattttctttggctgtagaa
aaaaatatcaaaagagaaGTATCATTAAACaattttctttacctttttta
GCAAAAGACAATCTATTTCAATATTCTGAGTGTCGGAGTTATAAAAACTT
TTGTGTTCATCTTTCTAACGAGTATTTTTATCAGCCAAATAGTTTGAGTG
AAGAAATTCTTCTTGTCCACTTAAAATGAACTAAAAGATTTAATACCATA
ACATTTTTATTAGGATGTTTGGCTCTACACTGAAAGCATCTTCAACTCGG
AGAAAAAGTGAATTTGATATGTTCTCTAAGAAGGATAtaccaaagaaaga
aaaacgaaagaCTGCAGCATCAGAACATTGTATCTCTTGTTTGGTTAAAT
GGCCAGCACTGGTATCTTCAAGAGTCTTGGATGTTATCCAGTTTGCTTCT
CTCCCTGATGTAAGATTCTATTTTTATACCCTATTGAAGCCCAAAATACC
TTAAAAAACCTCCTGAAAGCCTAGATTTTATTAATaatatgcaaaaataa
aacCACTTAAGAAAGAgattaatgcattttcgctcaTGCGGAACTATAAA
CTTAAGTTTGCATTAGTATTTGTTAtaacttttatcaaatttttgtcttc
caTATAGGAGCTGTTACAGAAGTACCAGAGTATTGAAGAACTCCAGAGTG
TTCCAACCACcttgaaattttataaacaactAATCAAT Coding sequence (CDS) from alignment at sc0000186_pilon:278497..283384+ >XLOC_041329 ID=XLOC_041329|Name=XLOC_041329|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4230bp|location=Sequence derived from alignment at sc0000186_pilon:278497..283384+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGCCTGCTGAGTATAACTCATCTCTCCAGCTTTACCTCTTTACCAGA
AAGATGTGCCTGCTGAGTATAACTCATCTCTCCAGCTTTACCTCTTTACC
AGAAAGtcTTTACAAAGAATTTCTGAATTTGAATCCCAACCGGTTGGTAA
ACTGTCTATCAGAAATGCAACAGAAGTATGAGATTGATTCATTCCTTCAG
TTGGTCTTACAACTTTTCTGCAAGCATTTCAATGTTCAAGAACCAGAGAT
TGCTTCCAGTGCCATCGATATGCTTTTCATACATTTAGAGCTTTCTGCAG
AAATGCTTCATAAACCTTGCCAtcTTTACAAAGAATTTCTGAATTTGAAT
CCCAACCGGTTGGTAAACTGTCTATCAGAAATGCAACAGAAGTATGAGAT
TGATTCATTCCTTCAGTTGGTCTTACAACTTTTCTGCAAGCATTTCAATG
TTCAAGAACCAGAGATTGCTTCCAGTGCCATCGATATGCTTTTCATACAT
TTAGAGCTTTCTGCAGAAATGCTTCATAAACCTTGCCAATACTTGGTTGA
TGCTTTTGTCAAATTAAACGATGACAATGAAAGTGCTGCTGAAGAATTAA
GTAGACTGATCAAAATCATCTccaaaagATACTTGGTTGATGCTTTTGTC
AAATTAAACGATGACAATGAAAGTGCTGCTGAAGAATTAAGTAGACTGAT
CAAAATCATCTccaaaagATTTCCAACAGCTTTTGATGGTTGCATTGATA
CAAAGTTCAAGGAGCATGAAGAGAACCCATCAGCCATTGAACAACTAAAA
ATTTTAACCAGAATTTGCTTGAGTGAAGAGAAATCAAAAGTGATAGGAAA
CGCTGAACTACCCCTTGTTGTTTGCTTAAACCATCCTGAGAAACAGTTAC
GATTGATGGCTACAAAACAGCTGTTTGAGATTTTCAAATCTGGTGTTTAT
TCTGAAGATCCTTCATTCTTTCAAGAGGGCGTCATCAGCAGATTGCAGGA
TGATGAGCCAGCTGTGGTAAAAGAGTGTCTGAGCCATCCAAAATCACTTT
TGAAGATTCTCTCTAAAGATGATGTCCATATTGTCTTGGAAAAGTTATCT
GAGCGAGCTGATGATACCTACAACTTGAGTCCCTTGTATATGAGGGTGTT
ACAAGATGTAGATCAAAATAGTACTGCtgatcaaaagttattcttCATGG
TTTTATCTCAAGTTTTCACATCAATCACAAGTAAAAAATTAAAtgcagtt
tttgaatttttcaacaacaaaGAGTATAACATCGACAATCACATCTTGAA
AGCAATCAAAACCACACTTTCATCCCATGGTGGTGTCAAAGTCAAAGATG
AAGCCAAGTTACTACAGCTTAATCGAACCTTGATGATGAACGTTGCAGAA
AGTTATGATTTGGATTCATTCAAAATTCTTTGGCAGTTCCAGTCCTCTCT
ACATTCTGATCACATTCTGAAATTTATCTCAAATCTGATCTTATTGATCA
ACACTTTATCTGGCAAATTTGGAGTAAATGAAGCTGCTTGTTTTGGACTG
TCGAGAGATGTTGTTGCTTCTCTTGATGTCGATAACTTTTTAGAGAATGA
CCCAGTTCCATTCATGTTGGAAATGTTTGTAGATGGTATCAAACGAAATC
GAAAGTTTGATGTTTCATTGACCAGTCTTTGTAATGCATTCTTTGTGAAG
GTCTTGATCCAGAAAATTTCAGATTTCCAACAGCTTTTGATGGTTGCATT
GATACAAAGTTCAAGGAGCATGAAGAGAACCCATCAGCCATTGAACAACT
AAAAATTTTAACCAGAATTTGCTTGAGTGAAGAGAAATCAAAAGTGATAG
GAAACGCTGAACTACCCCTTGTTGTTTGCTTAAACCATCCTGAGAAACAG
TTACGATTGATGGCTACAAAACAGCTGTTTGAGATTTTCAAATCTGGTGT
TTATTCTGAAGATCCTTCATTCTTTCAAGAGGGCGTCATCAGCAGATTGC
AGGATGATGAGCCAGCTGTGGTAAAAGAGTGTCTGAGCCATCCAAAATCA
CTTTTGAAGATTCTCTCTAAAGATGATGTCCATATTGTCTTGGAAAAGTT
ATCTGAGCGAGCTGATGATACCTACAACTTGAGTCCCTTGTATATGAGGG
TGTTACAAGATGTAGATCAAAATAGTACTGCtgatcaaaagttattcttC
ATGGTTTTATCTCAAGTTTTCACATCAATCACAAGTAAAAAATTAAAtgc
agtttttgaatttttcaacaacaaaGAGTATAACATCGACAATCACATCT
TGAAAGCAATCAAAACCACACTTTCATCCCATGGTGGTGTCAAAGTCAAA
GATGAAGCCAAGTTACTACAGCTTAATCGAACCTTGATGATGAACGTTGC
AGAAAGTTATGATTTGGATTCATTCAAAATTCTTTGGCAGTTCCAGTCCT
CTCTACATTCTGATCACATTCTGAAATTTATCTCAAATCTGATCTTATTG
ATCAACACTTTATCTGGCAAATTTGGAGTAAATGAAGCTGCTTGTTTTGG
ACTGTCGAGAGATGTTGTTGCTTCTCTTGATGTCGATAACTTTTTAGAGA
ATGACCCAGTTCCATTCATGTTGGAAATGTTTGTAGATGGTATCAAACGA
AATCGAAAGTTTGATGTTTCATTGACCAGTCTTTGTAATGCATTCTTTGT
GAAGGTCTTGATCCAGAAAATTTCAGAAAACAAAGATGAATTTGATGAAG
TTAAACAGAACATCTTCAAGACCATTGTCCCTTTTGCTACCAATAAAAAG
TCAAATGCTTTAAGCAACACTTGTCGTGAACTAACGAAAACGTTTTTCCA
GAAAACAAAGATGAATTTGATGAAGTTAAACAGAACATCTTCAAGACCAT
TGTCCCTTTTGCTACCAATAAAAAGTCAAATGCTTTAAGCAACACTTGTC
GTGAACTAACGAAAACGTTTTTCCAGACATGTTTCCAAGATACAGAACAA
GTCCGTCTGTTCACCGGCCAACTATGTATCAACGAACTATTTGCGAACCA
AAACATCAGCAAGGtggatttggaaatttctttGAGCTGTTTATCAATTG
TTGGTCTGTTGGTTGAAAGTGCTGAGAATGCATCAATCACTGATCTGGAC
ATGTTTCCAAGATACAGAACAAGTCCGTCTGTTCACCGGCCAACTATGTA
TCAACGAACTATTTGCGAACCAAAACATCAGCAAGGtggatttggaaatt
tctttGAGCTGTTTATCAATTGTTGGTCTGTTGGTTGAAAGTGCTGAGAA
TGCATCAATCACTGATCTGGAAATTGGACTACAAATCGGCTTATTATCCT
TCCCAAACAAGACAGTACGAGAAGTAGTGTGCGACATAATGGCGAAATAT
GGTGAAGTATTGAAGTCAAATCATCCTTGGTCATTCTTCACAAATCTTGT
TGTGGAAAATACTAACGAAATCGTTTTGGATGATACCCATGCTAAAAgAA
ATTGGACTACAAATCGGCTTATTATCCTTCCCAAACAAGACAGTACGAGA
AGTAGTGTGCGACATAATGGCGAAATATGGTGAAGTATTGAAGTCAAATC
ATCCTTGGTCATTCTTCACAAATCTTGTTGTGGAAAATACTAACGAAATC
GTTTTGGATGATACCCATGCTAAAAgGATGTTTGGCTCTACACTGAAAGC
ATCTTCAACTCGGAGAAAAAGTGAATTTGATATGTTCTCTAAGAAGGATA
taccaaagaaagaaaaacgaaagaCTGCAGCATCAGAACATTGTATCTCT
TGTTTGGTTAAATGGCCAGCACTGGTATCTTCAAGAGTCTTGGATGTTAT
CCAGTTTGCTTCTCTCCCTGATGATGTTTGGCTCTACACTGAAAGCATCT
TCAACTCGGAGAAAAAGTGAATTTGATATGTTCTCTAAGAAGGATAtacc
aaagaaagaaaaacgaaagaCTGCAGCATCAGAACATTGTATCTCTTGTT
TGGTTAAATGGCCAGCACTGGTATCTTCAAGAGTCTTGGATGTTATCCAG
TTTGCTTCTCTCCCTGATGAGCTGTTACAGAAGTACCAGAGTATTGAAGA
ACTCCAGAGTGTTCCAACCACcttgaaattttataaacaactAATCAATG
AGCTGTTACAGAAGTACCAGAGTATTGAAGAACTCCAGAGTGTTCCAACC
ACcttgaaattttataaacaactAATCAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000186_pilon | genome | sc0000186_pilon:278497..283384 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2035-2115:4808 |
| Aaloc | 1840-2034:4415 |
| Aaloc | 1663-1836:3993 |
| Aaloc | 1489-1659:3531 |
| Aaloc | 1366-1488:3124 |
| Aaloc | 361-1362:1852 |
| Aaloc | 271-357:762 |
| Aaloc | 55-267:326 |
| Aaloc | 1-51:1 |
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