|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000186_pilon:495510..498356+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041323 ID=XLOC_041323|Name=XLOC_041323|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2847bp|location=Sequence derived from alignment at sc0000186_pilon:495510..498356+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAGCTTGTATTAGATATTGAAAGTATATCACGGCTTGCAACGAG
ACAGACATCAGTCAAAGAGTTTGCTACTGTGTTAGAACAGTTGGACGTTT
ATTCCGGTAAGATCAGAGAGAAATTAAAGGAACCAAATCTACCTCAGTTA
CATAGAGACTCTTTAAGAGAAATTCAGAAATGTATCTCTCAGAtaatcaa
agaaaatcaacaaacttCTAAACAGGAAGATAACCTGCCACAGAgccaag
aaaaagaagaacaaagagAACGCGCGATAGGACAGACTATCATCAAAGCG
GGAGAAGTGAGATTTCAAGATATCGCTGGCCTAGACGTGGTCAAATCTCT
TTTACATGAAGCTGTTATATTACCGGTGCAATACCCTCATCTTTTCACGG
GGAAAGTGAAACCATGGAAAAGTATTCTGTTGTATGGACCACCCGGtatg
aatgaattttttatatttattcgTTTTAGTCCTTGTTTTCTATCatcaag
taattttttttagatcttTATGACATTTTCATCGCCCAAATAAGGCAATT
CTGTAGTCTTAATTGGCCCCATTTATCTCAATTAATTAGACTTGATGCTT
TCGCTGTTAATCACCACGGGGCACTCGGTGTGAAGCGTTTTTAAGTCATA
TTTTAGACAGCCGACTATCTATTCGTTCCTCTATGAAGTTAgatcgccgc
caaaattcgatccttcaagtcgtcccgtcgtactagaagtcgtcccgtcg
caaTTTTCGGTAGTCGAATCATCCCAAGTTTCAAGTCCTCCCGTCGCACT
AGAAGTTCGCAGGTCGTAATTCTTTTAAGTCGAGTCATACCAAGTTTCTA
GTGGTTCCTATCAGAAGTTAACTCGTCGGAACTTGGTACATGTTCCAATC
ATGTACGTTTAACTGTTCTCATAAGTGTTCATGTCATCCATCAGGTATAT
CatggagataaaaatataaattcacattgttttcaaaattttgacatggC
TCTAATCAATAAGTAAATTTCCACACGTGTGTTTCCACCAGCTTCCATTT
TGAACATTGAAGTTTTCCCTGGGTGAGCTCTGCACGTGCACAAAAACTGC
ACACCACACGAACATAACATTATCtccacaatattttgatttttgatata
caaaacaataaagtttttttccaGAATAGCCTAGAGTCCAACTTTTTGGG
ATGAGTCGACTGCCGAAATTTGCGACGAGTCAACTTCTGAAGCAACGACT
CGACTTAAAATTTGGAATGTTTCGACTTCCAAAAGATTCCGACTTGCAAA
CTTCTAATGCGACCTGCGGACTTCTagtgcgacgggacgacttctAGTAC
GTCGGGACGACTTGAAGGATCGAATTTTGGCGGTGATCTAACTTCATAGT
CCTCTCCATATTCTAATTCAGAGGCCAAATTAGTGATAATAGAGTATATA
CAATTATTGCTTTATAAATAAGAACtggaaaagaaagattttatgctcaa
agtgccaaaattgcAAGAACAgcctcaaaaaatatatattggaTTCTTAA
AAGGAAGAGTGTATTGAAAGGAATTTGTTTGAATTTATTTCTCAGGAACT
GGGAAGTCAACGATCGCTCACGCAGTTTCAACAGAGGCCAATTGTACCTT
CTATTCTTTATCTAGCTCTGATCTTCTCTCCTCTTGGTTTGGAGAAAGTG
AGAAATTGATTAAAGAGCTCTTCTCCCAAGCTAGAAGCAACCCACGTGCT
ATCATCTTTATTGATGAGATTGATAGTATTTGTAGGAAACGATCAAGCAA
GGTACTGCGGTAACATTTCGAGAATTTGGTAACCCAGGGGTGATGTTCAA
CGTTTGATGGTTTCCCTTAATatttatgtcaaaaatataaatttcttctT
GAATTTTCGGCAAATTAAAgtaagataaaaacaaaaacaaagttcTATTA
AATTGAAGAATCTCTTTTTTACAAAGGCTGCAAGGATTGGTGTTTTGTGT
TTAATGGGTTGAATATGATTGATAGATTTTTTAGCCATTAGGAAAACGTC
AACCGCGATTTGAGATGCCTTTTTTATTGGTGCTATCAAAAGGTGCATGG
GTTGCAGTGCTCAAAAGGGTATCTTTATCTACTGGCAGTATCCAGTCTAA
CACTTGTGTGACGTACTTTTCTTCTGgaatggctgtttttctatgccTTA
CTTTTCTGTAGGGGAGAAATTGgtgacaaaaactttttttatttccacAG
GAAGAAGAAACTACACGCCGTATAAAAAACGAACTTTTAAAACAAATGGA
TGGGTTCAGCAGAACATCTACATCTGCTTCTCCATCCGACGAGCCTAAGA
AACATCTCTTCGTTTTATGTGCTACAAACTGTCCTTGGGAACTCGATACA
GCATTCTTACGTCGATTTAGTAAACGGATATACATCCCTCTACCGGATGC
GAATTCGCGTAAACAGCTATTTCGCATCCATTTAAAAGACGTTGAAATGA
GTATAGATGATTCAGATTATGACCAACTTGTCGATAAAACGGATGGTTAT
TCAGGAAGTGATATCTCGAATTGTATTTCTGAAGCTGTTATGGAGCCGAT
TCGGGAATTAAGAGATTGCTCAACGTGGAAATGGAACGATTCGAAAATGT
CACTTTCTCCAACAATTAAAAGCGACGCTAGCGCTATATCATTGCGCCTG
GAGAATATACCACGTGAAAAAGTTCAACCTCGTAAATTAAATACGAAAGA
TTTGTTTCACTCGATTTCGTTGAATAAGAAAACAGTATCGCAAGAAGAAA
CTGTCCGATTTCAACAATTTACTGAAGATTTCGGACAAAATGGCTGA Coding sequence (CDS) from alignment at sc0000186_pilon:495510..498356+ >XLOC_041323 ID=XLOC_041323|Name=XLOC_041323|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2496bp|location=Sequence derived from alignment at sc0000186_pilon:495510..498356+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAGCTTGTATTAGATATTGAAAGTATATCACGGCTTGCAACGAG
ACAGACATCAGTCAAAGAGTTTGCTACTGTGTTAGAACAGTTGGACGTTT
ATTCCGGTAAGATCAGAGAGAAATTAAAGGAACCAAATCTACCTCAGTTA
CATAGAGACTCTTTAAGAGAAATTCAGAAATGTATCTCTCAGAtaatcaa
agaaaatcaacaaacttCTAAACAGGAAGATAACCTGCCACAGAgccaag
aaaaagaagaacaaagagAACGCGCGATAGGACAGACTATCATCAAAGCG
GGAGAAGTGAGATTTCAAGATATCGCTGGCCTAGACGTGGTCAAATCTCT
TTTACATGAAGCTGTTATATTACCGGTGCAATACCCTCATCTTTTCACGG
GGAAAGTGAAACCATGGAAAAGTATTCTGTTGTATGGACCACCCGATGGA
GAAGCTTGTATTAGATATTGAAAGTATATCACGGCTTGCAACGAGACAGA
CATCAGTCAAAGAGTTTGCTACTGTGTTAGAACAGTTGGACGTTTATTCC
GGTAAGATCAGAGAGAAATTAAAGGAACCAAATCTACCTCAGTTACATAG
AGACTCTTTAAGAGAAATTCAGAAATGTATCTCTCAGAtaatcaaagaaa
atcaacaaacttCTAAACAGGAAGATAACCTGCCACAGAgccaagaaaaa
gaagaacaaagagAACGCGCGATAGGACAGACTATCATCAAAGCGGGAGA
AGTGAGATTTCAAGATATCGCTGGCCTAGACGTGGTCAAATCTCTTTTAC
ATGAAGCTGTTATATTACCGGTGCAATACCCTCATCTTTTCACGGGGAAA
GTGAAACCATGGAAAAGTATTCTGTTGTATGGACCACCCGGAACTGGGAA
GTCAACGATCGCTCACGCAGTTTCAACAGAGGCCAATTGTACCTTCTATT
CTTTATCTAGCTCTGATCTTCTCTCCTCTTGGTTTGGAGAAAGTGAGAAA
TTGATTAAAGAGCTCTTCTCCCAAGCTAGAAGCAACCCACGTGCTATCAT
CTTTATTGATGAGATTGATAGTATTTGTAGGAAACGATCAAGCAAGGAAC
TGGGAAGTCAACGATCGCTCACGCAGTTTCAACAGAGGCCAATTGTACCT
TCTATTCTTTATCTAGCTCTGATCTTCTCTCCTCTTGGTTTGGAGAAAGT
GAGAAATTGATTAAAGAGCTCTTCTCCCAAGCTAGAAGCAACCCACGTGC
TATCATCTTTATTGATGAGATTGATAGTATTTGTAGGAAACGATCAAGCA
AGGAAGAAGAAACTACACGCCGTATAAAAAACGAACTTTTAAAACAAATG
GATGGGTTCAGCAGAACATCTACATCTGCTTCTCCATCCGACGAGCCTAA
GAAACATCTCTTCGTTTTATGTGCTACAAACTGTCCTTGGGAACTCGATA
CAGCATTCTTACGTCGATTTAGTAAACGGATATACATCCCTCTACCGGAT
GCGAATTCGCGTAAACAGCTATTTCGCATCCATTTAAAAGACGTTGAAAT
GAGTATAGATGATTCAGATTATGACCAACTTGTCGATAAAACGGATGGTT
ATTCAGGAAGTGATATCTCGAATTGTATTTCTGAAGCTGTTATGGAGCCG
ATTCGGGAATTAAGAGATTGCTCAACGTGGAAATGGAACGATTCGAAAAT
GTCACTTTCTCCAACAATTAAAAGCGACGCTAGCGCTATATCATTGCGCC
TGGAGAATATACCACGTGAAAAAGTTCAACCTCGTAAATTAAATACGAAA
GATTTGTTTCACTCGATTTCGTTGAATAAGAAAACAGTATCGCAAGAAGA
AACTGTCCGATTTCAACAATTTACTGAAGATTTCGGACAAAATGGCTGAG
AAGAAGAAACTACACGCCGTATAAAAAACGAACTTTTAAAACAAATGGAT
GGGTTCAGCAGAACATCTACATCTGCTTCTCCATCCGACGAGCCTAAGAA
ACATCTCTTCGTTTTATGTGCTACAAACTGTCCTTGGGAACTCGATACAG
CATTCTTACGTCGATTTAGTAAACGGATATACATCCCTCTACCGGATGCG
AATTCGCGTAAACAGCTATTTCGCATCCATTTAAAAGACGTTGAAATGAG
TATAGATGATTCAGATTATGACCAACTTGTCGATAAAACGGATGGTTATT
CAGGAAGTGATATCTCGAATTGTATTTCTGAAGCTGTTATGGAGCCGATT
CGGGAATTAAGAGATTGCTCAACGTGGAAATGGAACGATTCGAAAATGTC
ACTTTCTCCAACAATTAAAAGCGACGCTAGCGCTATATCATTGCGCCTGG
AGAATATACCACGTGAAAAAGTTCAACCTCGTAAATTAAATACGAAAGAT
TTGTTTCACTCGATTTCGTTGAATAAGAAAACAGTATCGCAAGAAGAAAC
TGTCCGATTTCAACAATTTACTGAAGATTTCGGACAAAATGGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000186_pilon | genome | sc0000186_pilon:495510..498356 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 652-1248:2251 |
| Aaloc | 448-651:1598 |
| Aaloc | 1-444:1 |
|
