|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000360_pilon:198480..202457- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041315 ID=XLOC_041315|Name=XLOC_041315|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3978bp|location=Sequence derived from alignment at sc0000360_pilon:198480..202457- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAACAAACCAGTGCAAGATTTTTGAAAACAAAATGGATATTGAAAT
ACAAGTTGCTGTTCAGTTTTTGGTATCATTTCTCGACGAGAAAATTAGCT
CCGAAGAAGTTGAGAGCTTTAGGAAAGAACTCAGAAGTTTGCTTTCTAAA
AAGTTTGAAGGTCATTGGTATCCAGAGAAGCCTGCAAAAGGCAGTGCCTA
CAGATGCCTTTCCATCGAAGAAAACATTGATACAGTTATTGTAAAAGCTG
CTGAAAAAGTCAAAATTGATATTGAAATGATCACAAGCAACCTTCCCAAG
AAACTTGATTTATGGATTGACCCAAGTGAAGTCTCCTATCGTATTGGTAA
GAATTCTTAATTCTAGAAGTTGAAGGCAATTCTTTGCTATTATGCATGGT
TTGAACGGAACATAATTTGTCCTCAGTTTTGTTTTTTTTGCTTTGAAAGA
TGATAGAAATTAGTTTTTCAGATTTTTTCTTTATCCATGTGGTTCAGTGA
TAATTAAAATGGATTTCAAACTCATTAAGGGAAATTAATTAATGATTTTC
TTTACCCTTTAATTTTACTATCCAACTTTCTAACACGTGGTGATACTATG
GTCTCAGTTTTAGGCCTTAGACTTTTTTCTTCATGCCAGAACTGTTGAGA
AAAAAATCTTAGATTCACTACTTCCTATTGCTGTGTTATTGTAATAATAA
ACACATCTAGTATTATCTTTATTATATCATGTACACTGTAAAATGAGTGT
CAAGGTCAAAATCCATTGTTGTTGACATATACGCAAACATTCTGATTGTC
AATTTATGAGATGTTTCTTTGTCTATTGACTTTTCCCTGCTGTTAAAAAC
TCATTGAATCTACTGAAGTGTTAATTTTCCTGCTCACCTTTTGACAGTCA
CAAATTAGCTTTGTAAACAAAAACAACTTTAAGTGTATGTTTTCATGTGG
TGACTTTGTAATGATGTATGAAATGCCGCTTTTCAACCCCTGAGACTATT
TTTCTCCTCTGCAAATGATGGCACAGGAAATGATGTCATTTCTTTTAGTC
CACAGATTTATTGAACAAAAGTAACTTTGATCATGACACTATTTTCAGCT
CAAAAAATTCTCTTTAATAAGTGTGTATCACTATAGTCGTTTGTGATAAT
GCAATGGTCTTTTTCATTACAAATTATTGATTATAAATTTCCAAAACACA
AAAACTCTTGGGTGATTGTGTGAAATCAAGTGTGTATTACTTATAGGTAA
TGAATCTACAGATCCTGCACTAATGTACTTCCCAGTTTTTTCAAAGGTAA
CGAACAGATAGTGCAGCTGGGAGAGCAATCACCCGGCAAGCGAGAGGTTG
TGGGTTCAATTCCCACTCGATTCGTTACCTTTGAGAAAACTGGGAAGTAC
ATTAGTGCAGGATCCGTTGATTCATTACCTATAAGTATTACGCACTTGAT
TTCACACAGTGACTGTTGATGGACTAGTTGTCTGAAATCAGGGCTCTGTT
GGGCTAATGCCTCTCCCTAATGTACATAGCTTAACAGTTTTCTCAAAGTT
AGCGGGTTGAACACTAGCTGTGTCTCAGTTCTTGGCAATTCCATTGATTC
GTAGAATTCAGGTACCGGATGGTGAACATTGAGCACGTCGCTCCCCTCAT
CTACTTCGAGCTAGTGTAATAGCAACAAACCGATAGAGCAGTTGGGAGAG
CGATCGCCCGGCGAGCGAGAGGTTGTGGGTTCAATTCCCATTAGTGCATT
AGTGCATGATCCGTTGATTCATTATCTTGGGTGATTGTATACACAAAATG
GATCCCCTATATCAAAACATATCAAATGGGATGTGTGCAGCCTAGCATTT
CCCTTCTAACATGCAATTCCTCAAGGCTTGAAATAACGGTTGGACTTCAG
ACATTGTATTTTGGCAGAATCCCGGACATCATAAAAACAAAACATAAAAA
ATAAGGCTTAAATCACTGTCACTGTGTGATTTTAAAATACCGTTTTTCCA
TCTCTTACGTCCCGTAATACTGTACTAAAAAAGAGCTGAACCTGTCACAC
CATAAAAGTACAAACACTGCTCTAAATTAGAGTAAATTGCTCTTAGTGAT
GAACCCATATTATTTTCTATTCAGACACCCATAGTGTCCTCCCCCCCCCC
TTTTATAAAGGAGATTCTGATTTTGCTACATTATTTGAGGTGTGTGGGAA
AAAGAATTTAACATTTGATGGGGGGGGATAAAGAGGAGGAAAACCATAAA
TTTTGGAAATTTTTATTGGGGAACTTCACTGATCTCAAGCCAATCTTTTA
GAAGACCTGTTTATGCAATAAAATCAGCAAACCTTACTTGAACCAAACCA
ATTTTTCAATAAAACTTTATTTTTCAAGCAATTTCAAAGCAAAAAAGAGG
GGGTCCGAAAAAAATTTAAATATATTGAGGGATAAAAAAGAGGGGGAATC
GAGAAAATTTTGGATTTTAGTAGGGGTAACCAACCCAGGAGGACACTACG
AATACCAATTTGATTGATTACCATGGTCAGGGATTTTGGAATACATTCAT
TTGCCTGACAATTTTTTTCAAAAAAAACCACTTTTGTTCTAATTTCTTTT
ATTTTCCTTGAAGGACTTCAGGAAAAACTCATGATTATAAATCAAATGTG
AGGATAATATTTAACTAGCATTAAATTTTGAAATCTAGGGAAAATCGCAA
ACCCACTCAAAGGTATTTACAAAATTTTGAATTTTTAAAATATTTCCCAA
TTTGCCAACAACATGCCTGGCTAAAAACAAATTCAGGTGGGTTAAAAAAA
TGCTCGGTTGAAAAGCTATCTCTTGTAATAGATGTTTTGGCAAACGCGAC
AGTCTTTTGAATAACTAATTACTCCACATACACATTACTTTCCCTCAGCC
AATAAAAACATGATAAATTATCTTGTCTCTAGGTAACTGCTATGGAGTAC
TCTCAGGTACCTAATAGCCGGGGGGTTTGGAATAAGCGGGGGGCTGGACT
AAATATGTCCTGGGTGGAAAACTTTTGAAAAGGAGGCTAATACAGCAGAA
TTCAAAAAAAATTCCCAAAAATCAATAAGCGCGGGGTTGAATAAGAACGT
CCTGGGTGGAAAATTAATTTGCGGGCCCCCGGCTATTAGGTACCCAACAG
TAATTAGTTATTCAAAATACCATCATGTCTGCCAAAACAACTATCAAATC
TGCCTGCAAGTATGAATTTGCAAAATTTGGCAATATTTAACACGTATGTT
TAGGGACAGAACTGACTCTAGAATGTATAGGAAATTTTTGAATAATTCTA
ATATTTGTCTCATTCATTCAGACTTGATGACTTTCAAAATACGTTTGCGT
TTTAGGTGCTCATGGATTGGTGATAGTCATTTACAAAGAAGGTGACGATT
TTGTAAATTCAACATCGGAATATCTTGCAAAAGTGTTGAGTCAGCTACCA
ACTGTAACTGAGAAACCCAAGAAAGATGCTGGTTCATCTCATGGGAACCA
AGACAAATCCAAAAATAAGCATTCAATCCCGCAGCAATTGGCAAATAGTA
TAAACATGTCGGTCAACCAGCGACGGATGAACAACCATCTGTCACCATCT
GCTAATGCCTTTGTATCACGTAAAAATGGAAACATGAATCTACCAGGTTT
CCATCACAGGCAGTCAAATCCAAACCAAAATCTTAATAATCAACTGGCAA
CCTTAGAATACCTGAAGAAATTACAGAATTGGCCTCTTCTTGCAGCTGCT
GCTACTGGTGTTAATTACGATCCACTTACGACACAACTCCTTCAAAATTA
TTTGGTAGTTCAAGAGCTCCAACGTTTTGAAACACAACGCTTGGCATTGC
AATCTCATCTCATGAAAATTCAAAATCTTCAAAGATGGTCACGTAAACCA
CACAATCGTCAAAACCATTCACAAAATTCTGGTAACAGCGGTAATGGTGG
GCGTAAAGGTCTTCAATGCACTGTGTGA Coding sequence (CDS) from alignment at sc0000360_pilon:198480..202457- >XLOC_041315 ID=XLOC_041315|Name=XLOC_041315|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1938bp|location=Sequence derived from alignment at sc0000360_pilon:198480..202457- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAACAAACCAGTGCAAGATTTTTGAAAACAAAATGGATATTGAAAT
ACAAGTTGCTGTTCAGTTTTTGGTATCATTTCTCGACGAGAAAATTAGCT
CCGAAGAAGTTGAGAGCTTTAGGAAAGAACTCAGAAGTTTGCTTTCTAAA
AAGTTTGAAGGTCATTGGTATCCAGAGAAGCCTGCAAAAGGCAGTGCCTA
CAGATGCCTTTCCATCGAAGAAAACATTGATACAGTTATTGTAAAAGCTG
CTGAAAAAGTCAAAATTGATATTGAAATGATCACAAGCAACCTTCCCAAG
AAACTTGATTTATGGATTGACCCAAGTGAAGTCTCCTATCGTATTGATGA
AAACAAACCAGTGCAAGATTTTTGAAAACAAAATGGATATTGAAATACAA
GTTGCTGTTCAGTTTTTGGTATCATTTCTCGACGAGAAAATTAGCTCCGA
AGAAGTTGAGAGCTTTAGGAAAGAACTCAGAAGTTTGCTTTCTAAAAAGT
TTGAAGGTCATTGGTATCCAGAGAAGCCTGCAAAAGGCAGTGCCTACAGA
TGCCTTTCCATCGAAGAAAACATTGATACAGTTATTGTAAAAGCTGCTGA
AAAAGTCAAAATTGATATTGAAATGATCACAAGCAACCTTCCCAAGAAAC
TTGATTTATGGATTGACCCAAGTGAAGTCTCCTATCGTATTGGTGCTCAT
GGATTGGTGATAGTCATTTACAAAGAAGGTGACGATTTTGTAAATTCAAC
ATCGGAATATCTTGCAAAAGTGTTGAGTCAGCTACCAACTGTAACTGAGA
AACCCAAGAAAGATGCTGGTTCATCTCATGGGAACCAAGACAAATCCAAA
AATAAGCATTCAATCCCGCAGCAATTGGCAAATAGTATAAACATGTCGGT
CAACCAGCGACGGATGAACAACCATCTGTCACCATCTGCTAATGCCTTTG
TATCACGTAAAAATGGAAACATGAATCTACCAGGTTTCCATCACAGGCAG
TCAAATCCAAACCAAAATCTTAATAATCAACTGGCAACCTTAGAATACCT
GAAGAAATTACAGAATTGGCCTCTTCTTGCAGCTGCTGCTACTGGTGTTA
ATTACGATCCACTTACGACACAACTCCTTCAAAATTATTTGGTAGTTCAA
GAGCTCCAACGTTTTGAAACACAACGCTTGGCATTGCAATCTCATCTCAT
GAAAATTCAAAATCTTCAAAGATGGTCACGTAAACCACACAATCGTCAAA
ACCATTCACAAAATTCTGGTAACAGCGGTAATGGTGGGCGTAAAGGTCTT
CAATGCACTGTGTGAGTGCTCATGGATTGGTGATAGTCATTTACAAAGAA
GGTGACGATTTTGTAAATTCAACATCGGAATATCTTGCAAAAGTGTTGAG
TCAGCTACCAACTGTAACTGAGAAACCCAAGAAAGATGCTGGTTCATCTC
ATGGGAACCAAGACAAATCCAAAAATAAGCATTCAATCCCGCAGCAATTG
GCAAATAGTATAAACATGTCGGTCAACCAGCGACGGATGAACAACCATCT
GTCACCATCTGCTAATGCCTTTGTATCACGTAAAAATGGAAACATGAATC
TACCAGGTTTCCATCACAGGCAGTCAAATCCAAACCAAAATCTTAATAAT
CAACTGGCAACCTTAGAATACCTGAAGAAATTACAGAATTGGCCTCTTCT
TGCAGCTGCTGCTACTGGTGTTAATTACGATCCACTTACGACACAACTCC
TTCAAAATTATTTGGTAGTTCAAGAGCTCCAACGTTTTGAAACACAACGC
TTGGCATTGCAATCTCATCTCATGAAAATTCAAAATCTTCAAAGATGGTC
ACGTAAACCACACAATCGTCAAAACCATTCACAAAATTCTGGTAACAGCG
GTAATGGTGGGCGTAAAGGTCTTCAATGCACTGTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000360_pilon | genome | sc0000360_pilon:198480..202457 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 349-969:622 |
| Aaloc | 1-345:3979 |
|
