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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000186_pilon:635146..638063- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041295 ID=XLOC_041295|Name=XLOC_041295|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2918bp|location=Sequence derived from alignment at sc0000186_pilon:635146..638063- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTAGACCAAACTCAACAGTACTTCATCACGCAATAGCAACGGGCGA
TTTAGAGACCCTTCAAAGCCTCTTAAAACAAGGTGTTGTGGACGCTGACA
CGAGACTACAGGTAAACCCGATTTCCCCGATTTTCACTTGATTTCACCGA
TTAAAGAGATCGTTATAGTTTTGTAAAGTCATCCTCCACATGTGGAAAAC
TGTCATTATTTGAAGATGCGATAGCTAACTGAAAACCTATATCATCTTAT
CCGAATCTTTAAAAAATAAGCCTCTCAAACTTTCGGTGTCTCCTGGCCAA
CTATTTCTGTAATTTGATTATATGACTAACAAACTCAAAATAAGTTTTCT
CGCTTTCACTGTTCAGTGTTCGATAGAGTACACTTCGATCCCTAATTTAA
AATATTTGATATCTGTGATAATAAAAGGTTGTACAGGTATGATTTGGGGA
AAAATTTGAATAATTCAACCCGTTGTTTCTTTATCTTAGGTTGACGAAGA
GATTCTAGAGACGGCAAGTCGTAAAAGTTACACGTCCATTCGAAGCTATC
GACAACAAAGTATGGCTAACGAAAACATTGCCGAAGAAAATGAAAGCGAA
CTCACAACAATTGATGACCAGGAGGAAGAGAACAAATCTAGTGAAACTGG
AAATCATGATAACACATCCAGCAGTACATCCAGTGAACTTGAAACTGACG
AATTTAAATCCAGTGAACTGAGAAGCGAGAATATTGAATCCACTGAAATA
GATTTGGAGTTTAAAACGGCATCCATTGAAATTGACGATGAAGAAAAAGA
CAGTGAAAATGAAATTGAAAAAATTATGGAAGAATGCCAACACGAGGCTG
AAATCGAAAACGTAGTTCCAGAAGAAGAGACCCCTATTGAAGATAGATAC
CTTAAAGCACAACCCATTGTGGGTATATCTACACCTCAAGACGAGGCTGA
AATAATAGTCCAAGATGATTTGGTAGAAGACCGACTGCAGCCTGTGCTCC
AACGATTGCGAGAGCCAGACATGGAAAGCTGTCAAAGCGGCTCATCGACA
CCCTTATTGAACAATAACAGAGGATCACTCGCCGATGTGATTGACTTGAA
ACTGAGAGACGATAATGAGGGTTTGTTTGAGCGAGCGCCTTCGATGAGAG
TAAATCCGATGAGTGAAGAAGGAGGTGCACCAAAGAAGTTGATTCCAAGG
TTCGAACCATTTCTTCTTTTAACTTCTTTCTTGTAGACTTCTCAGTTATA
ATTTCAATTCCTTGTGAACTTCTCAGTTATAACTCTGTGACTTGAAATCT
CTCCATTACTTGAGTACATCTATCGCCTATTGCATCTTCTTCAGCTCCAT
ATTCTTATAATTGGCTTTCTACAAGGCAAACTCTTCATAATTCGAACATT
TCGTGTTCTTTTGAGCGTCTAAGTTAGAGTTACAAACCAAAAATAACAAT
GCTATATCGCGATCCAAACTAGATATCTAAGATTTAATTTTTTTAAAGAT
TGGTACTGTTTAAAGTTCCTGGTAAGGCTAAACTTCATTTTTGAAGATCA
ATCTTTGAAAAAGGATGTTCTATTTTGACATAGGTTGAAAAGGAAGATCT
CGTTGAAGTTCAACAAGAAACCAAAAAGAGACCTCTTGGATGAAGATGAT
GATGACGACTTGATTTATGAGAATCTGGTCAAAACAAAGAACGTCGATGA
CGCACAGGTGAGTGGTATTGAGAGTTGCCAGGTGGTCTTTCATGGAGTGA
CTTTTTGGCTGAATGTTCTTGTTTTGGTGTTTTTTTTTTGCTATTTGATC
AGAGAGTTTCTCATTTCGTTGATTTTTTAAGGAAAATGTCATTGGGTGGA
CCCCAATACTTACTAGCAAAAAGTCCCTTTTAAGTTGTCCTTTTTCGATA
CATTCAGACTTACTGTGTGCTTGCCCGAGCTACTGAATCAACTGTATCTC
TAAAATCTGATTATTTTGAATTTCAGCTTGACGAAAATTTCGAAGGTGTG
GCTTTCTTCGAAGCAGTCCGTGACGGTATGGATATGATAGTCCAAACATT
GTTGGAAACCAGCGATAATTACCAACTCAACATGTTGGATGAGAACGGAT
TCACACCGGCAATGAATGCCGCATGGCACGGACAAGCAGACTGCTTACAA
ATCTTAATCAAGCACGGTGCGAATACAGACCTCCGAACGGCTACCGGCTG
TACCGCAGCACATTTTGCCGCCGGACAAGGTAATGCAGAATGCCTTCAAC
TCCTGATCGACGATGATAAAGATCAGATAGATATTAAAACAAAATTCGGA
GCAACGCCCTTGATTTTATCCGCCAAGGGCGGCCATAACGAATGTATGGA
GATTCTCCTTGATGCAGGTGCGGATGCAAACGTTCAGTACCGGGGAAAAC
AGAATGCGGTACTGTTCGCAGCCGGAAACGGACATTATGAATGTCTCGAA
ACACTAATCGAGCATGAAGTTAATCTGAATCAAACTAATTCCCAAAAAGT
AACGCCCTTAATGAGGGCGGTCCAACAAGGTCATAATACGTGTGTGGTGT
TACTTACCGATAAGGGCGCCGATATTAATCTGCAAGATGCGATCGGGCGG
TCCGCCCTACATTTCGCAGTCGAATATAACAACTCGAAGGGACTTAAATT
GTTGTTACAACAGGGTGCAAATGTGGATTTAAAAACGAAAGGTGGTTCGA
AGCCGCTCGATTATGCTGAGCGTTTTCAAAACACTCGCCTTGGAGAAATG
ATTGAAAATCATATTAACAAGCTCAGGGAAGAAGTCGAAAAGGAAAAAGA
AATTGAAGTACAAAAACAAATCGTCGAAGAGAAAGAGAACAAAGTTTCCT
GTCTAAGTTTCAAACATATATTTAGGCGCCGAAGTCGCAAAAATTCGGAC
GTTCAAAAAGCTGTATAA Coding sequence (CDS) from alignment at sc0000186_pilon:635146..638063- >XLOC_041295 ID=XLOC_041295|Name=XLOC_041295|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3774bp|location=Sequence derived from alignment at sc0000186_pilon:635146..638063- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTAGACCAAACTCAACAGTACTTCATCACGCAATAGCAACGGGCGA
TTTAGAGACCCTTCAAAGCCTCTTAAAACAAGGTGTTGTGGACGCTGACA
CGAGACTACAGATGTCTAGACCAAACTCAACAGTACTTCATCACGCAATA
GCAACGGGCGATTTAGAGACCCTTCAAAGCCTCTTAAAACAAGGTGTTGT
GGACGCTGACACGAGACTACAGGTTGACGAAGAGATTCTAGAGACGGCAA
GTCGTAAAAGTTACACGTCCATTCGAAGCTATCGACAACAAAGTATGGCT
AACGAAAACATTGCCGAAGAAAATGAAAGCGAACTCACAACAATTGATGA
CCAGGAGGAAGAGAACAAATCTAGTGAAACTGGAAATCATGATAACACAT
CCAGCAGTACATCCAGTGAACTTGAAACTGACGAATTTAAATCCAGTGAA
CTGAGAAGCGAGAATATTGAATCCACTGAAATAGATTTGGAGTTTAAAAC
GGCATCCATTGAAATTGACGATGAAGAAAAAGACAGTGAAAATGAAATTG
AAAAAATTATGGAAGAATGCCAACACGAGGCTGAAATCGAAAACGTAGTT
CCAGAAGAAGAGACCCCTATTGAAGATAGATACCTTAAAGCACAACCCAT
TGTGGGTATATCTACACCTCAAGACGAGGCTGAAATAATAGTCCAAGATG
ATTTGGTAGAAGACCGACTGCAGCCTGTGCTCCAACGATTGCGAGAGCCA
GACATGGAAAGCTGTCAAAGCGGCTCATCGACACCCTTATTGAACAATAA
CAGAGGATCACTCGCCGATGTGATTGACTTGAAACTGAGAGACGATAATG
AGGGTTTGTTTGAGCGAGCGCCTTCGATGAGAGTAAATCCGATGAGTGAA
GAAGGAGGTGCACCAAAGAAGTTGATTCCAAGGTTGACGAAGAGATTCTA
GAGACGGCAAGTCGTAAAAGTTACACGTCCATTCGAAGCTATCGACAACA
AAGTATGGCTAACGAAAACATTGCCGAAGAAAATGAAAGCGAACTCACAA
CAATTGATGACCAGGAGGAAGAGAACAAATCTAGTGAAACTGGAAATCAT
GATAACACATCCAGCAGTACATCCAGTGAACTTGAAACTGACGAATTTAA
ATCCAGTGAACTGAGAAGCGAGAATATTGAATCCACTGAAATAGATTTGG
AGTTTAAAACGGCATCCATTGAAATTGACGATGAAGAAAAAGACAGTGAA
AATGAAATTGAAAAAATTATGGAAGAATGCCAACACGAGGCTGAAATCGA
AAACGTAGTTCCAGAAGAAGAGACCCCTATTGAAGATAGATACCTTAAAG
CACAACCCATTGTGGGTATATCTACACCTCAAGACGAGGCTGAAATAATA
GTCCAAGATGATTTGGTAGAAGACCGACTGCAGCCTGTGCTCCAACGATT
GCGAGAGCCAGACATGGAAAGCTGTCAAAGCGGCTCATCGACACCCTTAT
TGAACAATAACAGAGGATCACTCGCCGATGTGATTGACTTGAAACTGAGA
GACGATAATGAGGGTTTGTTTGAGCGAGCGCCTTCGATGAGAGTAAATCC
GATGAGTGAAGAAGGAGGTGCACCAAAGAAGTTGATTCCAAGGTTGAAAA
GGAAGATCTCGTTGAAGTTCAACAAGAAACCAAAAAGAGACCTCTTGGAT
GAAGATGATGATGACGACTTGATTTATGAGAATCTGGTCAAAACAAAGAA
CGTCGATGACGCACAGGTTGAAAAGGAAGATCTCGTTGAAGTTCAACAAG
AAACCAAAAAGAGACCTCTTGGATGAAGATGATGATGACGACTTGATTTA
TGAGAATCTGGTCAAAACAAAGAACGTCGATGACGCACAGCTTGACGAAA
ATTTCGAAGGTGTGGCTTTCTTCGAAGCAGTCCGTGACGGTATGGATATG
ATAGTCCAAACATTGTTGGAAACCAGCGATAATTACCAACTCAACATGTT
GGATGAGAACGGATTCACACCGGCAATGAATGCCGCATGGCACGGACAAG
CAGACTGCTTACAAATCTTAATCAAGCACGGTGCGAATACAGACCTCCGA
ACGGCTACCGGCTGTACCGCAGCACATTTTGCCGCCGGACAAGGTAATGC
AGAATGCCTTCAACTCCTGATCGACGATGATAAAGATCAGATAGATATTA
AAACAAAATTCGGAGCAACGCCCTTGATTTTATCCGCCAAGGGCGGCCAT
AACGAATGTATGGAGATTCTCCTTGATGCAGGTGCGGATGCAAACGTTCA
GTACCGGGGAAAACAGAATGCGGTACTGTTCGCAGCCGGAAACGGACATT
ATGAATGTCTCGAAACACTAATCGAGCATGAAGTTAATCTGAATCAAACT
AATTCCCAAAAAGTAACGCCCTTAATGAGGGCGGTCCAACAAGGTCATAA
TACGTGTGTGGTGTTACTTACCGATAAGGGCGCCGATATTAATCTGCAAG
ATGCGATCGGGCGGTCCGCCCTACATTTCGCAGTCGAATATAACAACTCG
AAGGGACTTAAATTGTTGTTACAACAGGGTGCAAATGTGGATTTAAAAAC
GAAAGGTGGTTCGAAGCCGCTCGATTATGCTGAGCGTTTTCAAAACACTC
GCCTTGGAGAAATGATTGAAAATCATATTAACAAGCTCAGGGAAGAAGTC
GAAAAGGAAAAAGAAATTGAAGTACAAAAACAAATCGTCGAAGAGAAAGA
GAACAAAGTTTCCTGTCTAAGTTTCAAACATATATTTAGGCGCCGAAGTC
GCAAAAATTCGGACGTTCAAAAAGCTGTATAACTTGACGAAAATTTCGAA
GGTGTGGCTTTCTTCGAAGCAGTCCGTGACGGTATGGATATGATAGTCCA
AACATTGTTGGAAACCAGCGATAATTACCAACTCAACATGTTGGATGAGA
ACGGATTCACACCGGCAATGAATGCCGCATGGCACGGACAAGCAGACTGC
TTACAAATCTTAATCAAGCACGGTGCGAATACAGACCTCCGAACGGCTAC
CGGCTGTACCGCAGCACATTTTGCCGCCGGACAAGGTAATGCAGAATGCC
TTCAACTCCTGATCGACGATGATAAAGATCAGATAGATATTAAAACAAAA
TTCGGAGCAACGCCCTTGATTTTATCCGCCAAGGGCGGCCATAACGAATG
TATGGAGATTCTCCTTGATGCAGGTGCGGATGCAAACGTTCAGTACCGGG
GAAAACAGAATGCGGTACTGTTCGCAGCCGGAAACGGACATTATGAATGT
CTCGAAACACTAATCGAGCATGAAGTTAATCTGAATCAAACTAATTCCCA
AAAAGTAACGCCCTTAATGAGGGCGGTCCAACAAGGTCATAATACGTGTG
TGGTGTTACTTACCGATAAGGGCGCCGATATTAATCTGCAAGATGCGATC
GGGCGGTCCGCCCTACATTTCGCAGTCGAATATAACAACTCGAAGGGACT
TAAATTGTTGTTACAACAGGGTGCAAATGTGGATTTAAAAACGAAAGGTG
GTTCGAAGCCGCTCGATTATGCTGAGCGTTTTCAAAACACTCGCCTTGGA
GAAATGATTGAAAATCATATTAACAAGCTCAGGGAAGAAGTCGAAAAGGA
AAAAGAAATTGAAGTACAAAAACAAATCGTCGAAGAGAAAGAGAACAAAG
TTTCCTGTCTAAGTTTCAAACATATATTTAGGCGCCGAAGTCGCAAAAAT
TCGGACGTTCAAAAAGCTGTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000186_pilon | genome | sc0000186_pilon:635146..638063 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 946-1887:943 |
| Aaloc | 823-945:1335 |
| Aaloc | 112-819:2430 |
| Aaloc | 1-111:2919 |
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