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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000382_pilon:138040..139638+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041259 ID=XLOC_041259|Name=XLOC_041259|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1599bp|location=Sequence derived from alignment at sc0000382_pilon:138040..139638+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAAACCcatactttcactttcgttttgccGGAAAAATGGTGGATCCTCa
tcaagaaaatttacaaagacTGTGTAGAATTTGTGgggaaaatattctta
atgaTGGAGTTTTGGTGGATAGCAAATCCGAAGATATTTTGGAATGTTTC
TACCTTAAAACTAGAAAAGATGAGGATCGTAAACATCCAAAATATATATG
CCTCAAGTGCTGTGCCCAGCTGAATGCCATCAAAAAGCGGGGTTCTACGG
TAAAACATCAACTCATAAATTGGCCCTTGCACTCTGATGATGGTTGTTGG
GTTTGCTCAAGAGCTGATACTTCACGAAATAGTCCAGGTCGACCAAAGAA
GACCAAAAAGCAGGGTGGACGGCCATCAAAATCGCCAGTTCCCACGATAT
GGACACGTAACAACATACTTGCTTTGATCCAGCAGATTCCAGATTCTCTG
AAAGAAACAGACAACAACGATATTCCTTTGACTTCCTTTCTTCAAGATGA
CTTCACAGATTTGGTTAAGTGTCCAGTTTGTCAAAAACTCTTTGATAAAC
CAGTTTTGGTATCATCATGTCAGCACGTAGTATGTTTGATGTGTCTACTG
AGTCACATTGAAGGTCATGGACTTGAAAAATGCAAATGTCCATGTCAATC
ATGTACTTCATTGGTCTCCCCATCAGGTGTCATATTTTCTCAACAAACAA
TTGATATCATAAACAGATTAAAACCAGCCACATCAACTACTGAAATCAAA
CTGAAGGATGTATTCTCATTAACTACCAGTGATAAGGTTCCACGAGATTA
TGAAGAAGCTGCAGTACACATAATTAAAACCAAACTATCCCAATCATGTG
ACAAGTCAATATCATTCAACACTGATGGGTCAAGGGTAAGCAATCTAAAA
AAGAGAATGTGTTTGATAATTTAAGTTCTATTGATTGCAAAATTTTTGTC
ATGCCATGACATAAATGAGGACAAAATTTCAAGCTTATTAAGataaagtc
aaaaaatttattcaatgtGGATTGTTGTATAATATagattattgttttct
ttttaagccTCTTGTTCTTGTATCAACCCGGTAGCAATCAAGAAGAATGT
TTGTCGTCGTGCAATCCAGTTTGGAAATGCAGCAATTAAAACTTTACTGA
GTCTTGTCAGCAATGGAGACAGCACAAATCAGACAGCACATTTTGTCAAT
TCGTTAACGTTATTTGAACAAAAAGAGATCATTGGTAACAGAGTTTTTGA
TGCAAAAACAATTGTTGCTATGAAGGCTGATTTAGAAATACCATAGGCAA
CACTGAGGAAATTAGCAAGGTTACAGAATTTCCCAGTTTATTAGCATTAT
ATATCAGTAACATTAAACAACCAGGATAGAAATCTGTCAGTTTACTTTAG
CATATATACACATTATTTCAGTATCCCTGTTTTTAAAGTCATGTTTAGAA
CATAGAGCAGATTACCCCATGGGTGCATAAAGGTTTCAAAttgttgaatt
gaaaaattctggaaatattttctcaatttaacaattaacttttctatctt
ttttgcttttatactGTAGGTGGATGAGGGAAAGCAAAATAACATTTGA Coding sequence (CDS) from alignment at sc0000382_pilon:138040..139638+ >XLOC_041259 ID=XLOC_041259|Name=XLOC_041259|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1830bp|location=Sequence derived from alignment at sc0000382_pilon:138040..139638+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAAACCcatactttcactttcgttttgccGGAAAAATGGTGGATCCTCa
tcaagaaaatttacaaagacTGTGTAGAATTTGTGgggaaaatattctta
atgaTGGAGTTTTGGTGGATAGCAAATCCGAAGATATTTTGGAATGTTTC
TACCTTAAAACTAGAAAAGATGAGGATCGTAAACATCCAAAATATATATG
CCTCAAGTGCTGTGCCCAGCTGAATGCCATCAAAAAGCGGGGTTCTACGG
TAAAACATCAACTCATAAATTGGCCCTTGCACTCTGATGATGGTTGTTGG
GTTTGCTCAAGAGCTGATACTTCACGAAATAGTCCAGGTCGACCAAAGAA
GACCAAAAAGCAGGGTGGACGGCCATCAAAATCGCCAGTTCCCACGATAT
GGACACGTAACAACATACTTGCTTTGATCCAGCAGATTCCAGATTCTCTG
AAAGAAACAGACAACAACGATATTCCTTTGACTTCCTTTCTTCAAGATGA
CTTCACAGATTTGGTTAAGTGTCCAGTTTGTCAAAAACTCTTTGATAAAC
CAGTTTTGGTATCATCATGTCAGCACGTAGTATGTTTGATGTGTCTACTG
AGTCACATTGAAGGTCATGGACTTGAAAAATGCAAATGTCCATGTCAATC
ATGTACTTCATTGGTCTCCCCATCAGGTGTCATATTTTCTCAACAAACAA
TTGATATCATAAACAGATTAAAACCAGCCACATCAACTACTGAAATCAAA
CTGAAGGATGTATTCTCATTAACTACCAGTGATAAGGTTCCACGAGATTA
TGAAGAAGCTGCAGTACACATAATTAAAACCAAACTATCCCAATCATGTG
ACAAGTCAATATCATTCAACACTGATGGGTCAAGGCAAAACCcatacttt
cactttcgttttgccGGAAAAATGGTGGATCCTCatcaagaaaatttaca
aagacTGTGTAGAATTTGTGgggaaaatattcttaatgaTGGAGTTTTGG
TGGATAGCAAATCCGAAGATATTTTGGAATGTTTCTACCTTAAAACTAGA
AAAGATGAGGATCGTAAACATCCAAAATATATATGCCTCAAGTGCTGTGC
CCAGCTGAATGCCATCAAAAAGCGGGGTTCTACGGTAAAACATCAACTCA
TAAATTGGCCCTTGCACTCTGATGATGGTTGTTGGGTTTGCTCAAGAGCT
GATACTTCACGAAATAGTCCAGGTCGACCAAAGAAGACCAAAAAGCAGGG
TGGACGGCCATCAAAATCGCCAGTTCCCACGATATGGACACGTAACAACA
TACTTGCTTTGATCCAGCAGATTCCAGATTCTCTGAAAGAAACAGACAAC
AACGATATTCCTTTGACTTCCTTTCTTCAAGATGACTTCACAGATTTGGT
TAAGTGTCCAGTTTGTCAAAAACTCTTTGATAAACCAGTTTTGGTATCAT
CATGTCAGCACGTAGTATGTTTGATGTGTCTACTGAGTCACATTGAAGGT
CATGGACTTGAAAAATGCAAATGTCCATGTCAATCATGTACTTCATTGGT
CTCCCCATCAGGTGTCATATTTTCTCAACAAACAATTGATATCATAAACA
GATTAAAACCAGCCACATCAACTACTGAAATCAAACTGAAGGATGTATTC
TCATTAACTACCAGTGATAAGGTTCCACGAGATTATGAAGAAGCTGCAGT
ACACATAATTAAAACCAAACTATCCCAATCATGTGACAAGTCAATATCAT
TCAACACTGATGGGTCAAGGGTGGATGAGGGAAAGCAAAATAACATTTGA
GTGGATGAGGGAAAGCAAAATAACATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000382_pilon | genome | sc0000382_pilon:138040..139638 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 886-915:1570 |
| Aaloc | 1-885:1 |
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