XLOC_041258 (mRNA) -

Overview
NameXLOC_041258
Unique NameXLOC_041258
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000062_pilon:241604..242659-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041258 ID=XLOC_041258|Name=XLOC_041258|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1056bp|location=Sequence derived from alignment at sc0000062_pilon:241604..242659- (Clytia hemisphaerica_ch_hm2_pilon)
GAGAACGAATTGACAATCAATGCCAGTTGTGGTCCTTGCTACAGAAAACT TGACGAGGTTCTACAATCGGTTGGTGTTCAAAGACAGGCATATCACGGAA GATCATTTATAGGAAACGATGTTCATAAAATGTTGCATGTACGTATCAAA AGTCCAAGATACATTGATAAAAATCCTTTTGAAAATTTTATAAATGCAAA AGACCGTAAAAATGCCCTTTTTCATGAAAAATATCAAAAATTTTGCTTGG AGCTAATTTCCATATCCTACCAAGTACCTAAGAAATTCATGATGTGAAGT AAGACCAAATTTAATTTAATCAACTTACAATGTTTAAAACTTCTATCTTT CAGGAAAAAAACATTCGCAAGCTATGTCACAGCATTCCTAAACTAGTTTA CGATGAATTTGGTTTGATCGACACCCCTGCCCACATACGTGCATGTGATA TCAGCAAGAGATTTAAAGAATTGATGGATAATTATGGTGTTTGTCATCGA CTCATGAACTCATCTGATTATTTCAATGATGAAAAAATTCAGCAGCTAGG TATGTTTTTTTTGTGATATCCAGTATGATTGTCTATTTTTGAATACCCGC TTTAAATTAAACATTGAAAATTCTGTCCTTACCAACCATAATGTCTCTTT GGTTGGTGATTTTAAAAAGGGGAATTAATATTGGAAATTTGTATAGTAAA AGTTCCACTTACCAGGATCCTTGTCTTTTTCTTCAGATACAGCAATCAAA AAGTTCTTTGTGCACTACCGTGATAACTTTAAACAATCAATCACAATCAA ACTTCATATGCTCGAGTGTCACATTCTAAAGTTCATCAAAAAGTGGCGTA TTGGTCTTGGTATGTATGGCGAACAAGGTGCGGAGAGTATTCATCCAGAG TTCAATAGTCTTCGAAAAACATATGCATCTCACAAACCTGCTGAAAAACG ATTACAGACCATGGTCGAGCAGCATCTCCTCCGAGTTGCACCAGAAGTTC GGGTAACTGTTCCAAAACCTCCAACACGCAAGCGAAAACATAAACCTGAA GAGTAA

Coding sequence (CDS) from alignment at sc0000062_pilon:241604..242659-

>XLOC_041258 ID=XLOC_041258|Name=XLOC_041258|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1308bp|location=Sequence derived from alignment at sc0000062_pilon:241604..242659- (Clytia hemisphaerica_ch_hm2_pilon)
GAGAACGAATTGACAATCAATGCCAGTTGTGGTCCTTGCTACAGAAAACT
TGACGAGGTTCTACAATCGGTTGGTGTTCAAAGACAGGCATATCACGGAA
GATCATTTATAGGAAACGATGTTCATAAAATGTTGCATGAGAACGAATTG
ACAATCAATGCCAGTTGTGGTCCTTGCTACAGAAAACTTGACGAGGTTCT
ACAATCGGTTGGTGTTCAAAGACAGGCATATCACGGAAGATCATTTATAG
GAAACGATGTTCATAAAATGTTGCATGAAAAAAACATTCGCAAGCTATGT
CACAGCATTCCTAAACTAGTTTACGATGAATTTGGTTTGATCGACACCCC
TGCCCACATACGTGCATGTGATATCAGCAAGAGATTTAAAGAATTGATGG
ATAATTATGGTGTTTGTCATCGACTCATGAACTCATCTGATTATTTCAAT
GATGAAAAAATTCAGCAGCTAGGAAAAAAACATTCGCAAGCTATGTCACA
GCATTCCTAAACTAGTTTACGATGAATTTGGTTTGATCGACACCCCTGCC
CACATACGTGCATGTGATATCAGCAAGAGATTTAAAGAATTGATGGATAA
TTATGGTGTTTGTCATCGACTCATGAACTCATCTGATTATTTCAATGATG
AAAAAATTCAGCAGCTAGATACAGCAATCAAAAAGTTCTTTGTGCACTAC
CGTGATAACTTTAAACAATCAATCACAATCAAACTTCATATGCTCGAGTG
TCACATTCTAAAGTTCATCAAAAAGTGGCGTATTGGTCTTGGTATGTATG
GCGAACAAGGTGCGGAGAGTATTCATCCAGAGTTCAATAGTCTTCGAAAA
ACATATGCATCTCACAAACCTGCTGAAAAACGATTACAGACCATGGTCGA
GCAGCATCTCCTCCGAGTTGCACCAGAAGTTCGGGTAACTGTTCCAAAAC
CTCCAACACGCAAGCGAAAACATAAACCTGAAGAGTAAATACAGCAATCA
AAAAGTTCTTTGTGCACTACCGTGATAACTTTAAACAATCAATCACAATC
AAACTTCATATGCTCGAGTGTCACATTCTAAAGTTCATCAAAAAGTGGCG
TATTGGTCTTGGTATGTATGGCGAACAAGGTGCGGAGAGTATTCATCCAG
AGTTCAATAGTCTTCGAAAAACATATGCATCTCACAAACCTGCTGAAAAA
CGATTACAGACCATGGTCGAGCAGCATCTCCTCCGAGTTGCACCAGAAGT
TCGGGTAACTGTTCCAAAACCTCCAACACGCAAGCGAAAACATAAACCTG
AAGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041258XLOC_041258-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000062_pilongenomesc0000062_pilon:241604..242659 -
Properties
Property NameValue
Aaloc337-654:319
Aaloc139-333:704
Aaloc1-138:1057