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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000030_pilon:5563..8049+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041252 ID=XLOC_041252|Name=XLOC_041252|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2487bp|location=Sequence derived from alignment at sc0000030_pilon:5563..8049+ (Clytia hemisphaerica_ch_hm2_pilon)
CCTTGCGGTTATATGGTACTATCGAACGATGGAGATTTATTTGGCGTTCA
AGATAACAATTCCGAAAGCAACGAACATTTagtaattgtttttttctgaa
cttaACATACTCTATTATGTGAAAGTACCTAACCTCACCTTGTTTTTTAA
AGTTGCCTTTGATATTGGGTCTAAATTGTTTATTGTCTGATGTGGTAGAA
AATCCAATTCTAAAAAGTGATTCTAGTAAAGTAGGAATATAGctgaaaga
aattatttttttgctgGTAAAAGATTTGCTTCTCTAAAAAgctaaacatt
ttttatttttagacaaACGTGACAAACGTGTTAATGGATGACAACAACCT
TCAATCTGAATTCGACATGGATGGTTGTTTAATTGATAGTGATGTAAGAT
ATTATACTGCTATCAAAATGGCAATTATTTTCTCATATCAAAATCACTTT
GAAACTCGAAATAATTCAACagttagagaatttttttttctcaggtaCCA
GTACAGATTCATGACACGATGGACAAATTGCTACAAGATGTCGATGCTCT
CCTTATAAGCAGTACCGTAAGAAGCActaatcaaaacattgatgtGACAC
GAAAAGATCGACTAGGGAGGGATCATGTTACATTCAAGCGAACGGGCCCA
CTGGTAGTCTGCATAAGGAATGGGATGTTTCACCATTTGACCATGGAGGT
AAACCTTTATATTCAGATAAGGGCAAACTTTAACTAATCTGGATCGGGCA
AAGGACCCCAGTATTAATGAGGAATAAAGTATgtatatttattcaatatt
tttgtattcATCTTTTTCAGGCTCATGCTAACGACTTGCTTCCAATTCTA
AAAGGTGCCATTGACCACGGAAAATCATTTGTGGAGGTGATTGGCGACAA
TGGACCAGACATGGACCCAACAAATTATATGAACATATTCTATTGGGGAC
GACTTTGGCGAGACACTAATTTGACGAGACTCAGCTGCATTTCCTACCCC
GCTGGTCACTCAGCTTTTAACCCAATTGAGCATGCTTGGTCGCCAATGAG
CAATGCTATGACATCGATAACAATTTCAGCATGCTTACCaggttgatttt
ctttatttgaaattttttatttttgttgtaaGTGTAAAATAAgttctaca
atcagtgacaaaatacttggcacgaaaaggaaattcaccggggtgttttg
aaaccacaatcaatttgtaattgctctaaagtaggttcgaagggtagagt
tttatctctgagttttaacgctagacttaagacttacgaccttaggataT
TTGCTTAGTCACATAATGTCTCAATGTCTCATCTGTCAGTCTTTGACAAG
GGTAGTTATATTATAGATTCTTTCTTTATTTCACCAGGTGAAGACCGCTC
ACCAAATAAGCAAACAGAGTTATCACCTGACGAAATCAGCGCCAAAACCA
AAACCATGTTGGAAAATGCCGCTCGAGAGCTTTCAAGCTACTGGGATAAG
CTTACCTACGACGGGAATGCTGTTATCCCTCTCCCTGTGGAGACAGAAGG
TGTTTACAACGATCACTGCAAAGTTGAAGAATTCGTTAACGCCCCACTGA
GAGATTTGGACGGCAAAGAATTGGAACCCCTtcgaaaagaatttcttttc
ttcTGTCGGCATGTTGATCAACGAAAAAACGCACTTTCCTTCATGAAGTG
TCAACTTTTTAGAAAGGACCCCTGCAAATTTTGCTTCGACAACCCACCCA
AGGATTGTGACgcttttgaatttgaaaagtcgATCGGTGGTTTGATGTTC
GATCCAGTACCATCGACAGAGCACGATGGTCATTTCAAGACATATCTGGA
GGTGAAGTCTGAAGATGGTGTAAAGTACCAGCCGGACACCGACACCGATC
TAGGAAGATGCTCTGAATGTACCAATTGGTATTTCACTTCCCTGACCGAA
ATGCAGCGACATAGAAGGTTGCTACACCCGAAAGTTGCCATTCAAAACTT
GGCTCTTCCAAATAGTGGCAAACAGGTTGATAGCCTGTTCTTATGCAAGT
TTAAAGTCCAAGGAAATAAAACGTGTGGTCTGTCCTTTCCTACTTACCAT
CAGCTGaacaaacacaaacaaaaatCTGGCCACAAGAGACAGCGCGCCAA
AGCTGCACAGGACGAGATTCAAGCAAGggcaaagaaatcaaagaaagttg
CCACTGAGAAACTGAAGATCaaagatttcttttcaaaaaagatcAGCATC
AATATCGTCGATACACCATCTGAGGAAAAAGAAAACCAGCCTGGTCCATC
GGATGATCAACCAGTTGAGCAGCCTGGGCCATCGGATGATCAACCAGTTG
AGCAGCCTGGGCCATCGGATGATCAACCAGTTGAGCAGCCTGTcaaaaaa
aacagaacaaaagaagaaacgaaagagaaaaccaaaacagacagaagaTC
AGTATATCGAGGACGCCGACGACCCCTGTTCTTCTCC Coding sequence (CDS) from alignment at sc0000030_pilon:5563..8049+ >XLOC_041252 ID=XLOC_041252|Name=XLOC_041252|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3474bp|location=Sequence derived from alignment at sc0000030_pilon:5563..8049+ (Clytia hemisphaerica_ch_hm2_pilon)
CCTTGCGGTTATATGGTACTATCGAACGATGGAGATTTATTTGGCGTTCA
AGATAACAATTCCGAAAGCAACGAACATTTaCCTTGCGGTTATATGGTAC
TATCGAACGATGGAGATTTATTTGGCGTTCAAGATAACAATTCCGAAAGC
AACGAACATTTaacaaACGTGACAAACGTGTTAATGGATGACAACAACCT
TCAATCTGAATTCGACATGGATGGTTGTTTAATTGATAGTGATacaaACG
TGACAAACGTGTTAATGGATGACAACAACCTTCAATCTGAATTCGACATG
GATGGTTGTTTAATTGATAGTGATgtaCCAGTACAGATTCATGACACGAT
GGACAAATTGCTACAAGATGTCGATGCTCTCCTTATAAGCAGTACCGTAA
GAAGCActaatcaaaacattgatgtGACACGAAAAGATCGACTAGGGAGG
GATCATGTTACATTCAAGCGAACGGGCCCACTGGTAGTCTGCATAAGGAA
TGGGATGTTTCACCATTTGACCATGGAGgtaCCAGTACAGATTCATGACA
CGATGGACAAATTGCTACAAGATGTCGATGCTCTCCTTATAAGCAGTACC
GTAAGAAGCActaatcaaaacattgatgtGACACGAAAAGATCGACTAGG
GAGGGATCATGTTACATTCAAGCGAACGGGCCCACTGGTAGTCTGCATAA
GGAATGGGATGTTTCACCATTTGACCATGGAGGCTCATGCTAACGACTTG
CTTCCAATTCTAAAAGGTGCCATTGACCACGGAAAATCATTTGTGGAGGT
GATTGGCGACAATGGACCAGACATGGACCCAACAAATTATATGAACATAT
TCTATTGGGGACGACTTTGGCGAGACACTAATTTGACGAGACTCAGCTGC
ATTTCCTACCCCGCTGGTCACTCAGCTTTTAACCCAATTGAGCATGCTTG
GTCGCCAATGAGCAATGCTATGACATCGATAACAATTTCAGCATGCTTAC
CagGCTCATGCTAACGACTTGCTTCCAATTCTAAAAGGTGCCATTGACCA
CGGAAAATCATTTGTGGAGGTGATTGGCGACAATGGACCAGACATGGACC
CAACAAATTATATGAACATATTCTATTGGGGACGACTTTGGCGAGACACT
AATTTGACGAGACTCAGCTGCATTTCCTACCCCGCTGGTCACTCAGCTTT
TAACCCAATTGAGCATGCTTGGTCGCCAATGAGCAATGCTATGACATCGA
TAACAATTTCAGCATGCTTACCagGTGAAGACCGCTCACCAAATAAGCAA
ACAGAGTTATCACCTGACGAAATCAGCGCCAAAACCAAAACCATGTTGGA
AAATGCCGCTCGAGAGCTTTCAAGCTACTGGGATAAGCTTACCTACGACG
GGAATGCTGTTATCCCTCTCCCTGTGGAGACAGAAGGTGTTTACAACGAT
CACTGCAAAGTTGAAGAATTCGTTAACGCCCCACTGAGAGATTTGGACGG
CAAAGAATTGGAACCCCTtcgaaaagaatttcttttcttcTGTCGGCATG
TTGATCAACGAAAAAACGCACTTTCCTTCATGAAGTGTCAACTTTTTAGA
AAGGACCCCTGCAAATTTTGCTTCGACAACCCACCCAAGGATTGTGACgc
ttttgaatttgaaaagtcgATCGGTGGTTTGATGTTCGATCCAGTACCAT
CGACAGAGCACGATGGTCATTTCAAGACATATCTGGAGGTGAAGTCTGAA
GATGGTGTAAAGTACCAGCCGGACACCGACACCGATCTAGGAAGATGCTC
TGAATGTACCAATTGGTATTTCACTTCCCTGACCGAAATGCAGCGACATA
GAAGGTTGCTACACCCGAAAGTTGCCATTCAAAACTTGGCTCTTCCAAAT
AGTGGCAAACAGGTTGATAGCCTGTTCTTATGCAAGTTTAAAGTCCAAGG
AAATAAAACGTGTGGTCTGTCCTTTCCTACTTACCATCAGCTGaacaaac
acaaacaaaaatCTGGCCACAAGAGACAGCGCGCCAAAGCTGCACAGGAC
GAGATTCAAGCAAGggcaaagaaatcaaagaaagttgCCACTGAGAAACT
GAAGATCaaagatttcttttcaaaaaagatcAGCATCAATATCGTCGATA
CACCATCTGAGGAAAAAGAAAACCAGCCTGGTCCATCGGATGATCAACCA
GTTGAGCAGCCTGGGCCATCGGATGATCAACCAGTTGAGCAGCCTGGGCC
ATCGGATGATCAACCAGTTGAGCAGCCTGTcaaaaaaaacagaacaaaag
aagaaacgaaagagaaaaccaaaacagacagaagaTCAGTATATCGAGGA
CGCCGACGACCCCTGTTCTTCTCCGTGAAGACCGCTCACCAAATAAGCAA
ACAGAGTTATCACCTGACGAAATCAGCGCCAAAACCAAAACCATGTTGGA
AAATGCCGCTCGAGAGCTTTCAAGCTACTGGGATAAGCTTACCTACGACG
GGAATGCTGTTATCCCTCTCCCTGTGGAGACAGAAGGTGTTTACAACGAT
CACTGCAAAGTTGAAGAATTCGTTAACGCCCCACTGAGAGATTTGGACGG
CAAAGAATTGGAACCCCTtcgaaaagaatttcttttcttcTGTCGGCATG
TTGATCAACGAAAAAACGCACTTTCCTTCATGAAGTGTCAACTTTTTAGA
AAGGACCCCTGCAAATTTTGCTTCGACAACCCACCCAAGGATTGTGACgc
ttttgaatttgaaaagtcgATCGGTGGTTTGATGTTCGATCCAGTACCAT
CGACAGAGCACGATGGTCATTTCAAGACATATCTGGAGGTGAAGTCTGAA
GATGGTGTAAAGTACCAGCCGGACACCGACACCGATCTAGGAAGATGCTC
TGAATGTACCAATTGGTATTTCACTTCCCTGACCGAAATGCAGCGACATA
GAAGGTTGCTACACCCGAAAGTTGCCATTCAAAACTTGGCTCTTCCAAAT
AGTGGCAAACAGGTTGATAGCCTGTTCTTATGCAAGTTTAAAGTCCAAGG
AAATAAAACGTGTGGTCTGTCCTTTCCTACTTACCATCAGCTGaacaaac
acaaacaaaaatCTGGCCACAAGAGACAGCGCGCCAAAGCTGCACAGGAC
GAGATTCAAGCAAGggcaaagaaatcaaagaaagttgCCACTGAGAAACT
GAAGATCaaagatttcttttcaaaaaagatcAGCATCAATATCGTCGATA
CACCATCTGAGGAAAAAGAAAACCAGCCTGGTCCATCGGATGATCAACCA
GTTGAGCAGCCTGGGCCATCGGATGATCAACCAGTTGAGCAGCCTGGGCC
ATCGGATGATCAACCAGTTGAGCAGCCTGTcaaaaaaaacagaacaaaag
aagaaacgaaagagaaaaccaaaacagacagaagaTCAGTATATCGAGGA
CGCCGACGACCCCTGTTCTTCTCC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000030_pilon | genome | sc0000030_pilon:5563..8049 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 640-1737:1390 |
| Aaloc | 367-636:821 |
| Aaloc | 163-366:495 |
| Aaloc | 82-162:313 |
| Aaloc | 1-81:1 |
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