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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000021_pilon:404753..408193- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041231 ID=XLOC_041231|Name=XLOC_041231|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3441bp|location=Sequence derived from alignment at sc0000021_pilon:404753..408193- (Clytia hemisphaerica_ch_hm2_pilon)
GAATTTATTTCTATTATTCATTCAGGTGTTGGGAAATCATGTTTACTCCT
TCAATTTACTGACAAACGTTTCCAACCAGTTCACGATTTAACGATCGGTA
GGTATTTATTATTAAGATTACTGACAAAATATATTTTTGAAATAACATAA
TAAAATTTTCAAAGTTTCCACAAAGTTTCTTCACACTCGGAATATACTAG
GTTTGGAGATTGGATTTTAAGGGCTACCTACACTACACAATATATTTTCA
GGTAATATATTGATAGTATATTGCTGAATGCCGGCAATATATTGAAAAGG
TGTCCACAATATATTGTCAGCTCAATTTGAAATATTCCGACAATACAGGA
GGATTGTTTACAGAAATAAAATTCCTTTTTTTAATAGATCACCTGTTGTT
TCATCCGAACATTACGGTTCGAAAAACATATTTTCGAATAGTGCTCACCA
ATATATTGTGTAGTCTTTTAAGTAGCCCTTTAGGATTTTGTTTCAAACTT
AAATATTGATCACCGGTCATTTTCAATTCTAATAGTCTTTTCAATTCTAT
TAGTCTTTTCAGTAAGTTTATGCCTCAATGACACCTTTTAAAATCAAAGT
TACCACACTCCACAGTCTCAATTATGGTGGGTACCTTTAATGTCACTTTT
TTTGTAAAATCTATACAAGTTGTATAAAATTCTTTACAGGTGTTGAATTT
GGTGCCCGAATGATCACAATAGACGGAAAACAAATCAAACTTCAAATTTG
GGACACAGTAAGTGAAGTTTTTAATTTACAAACCAAAACTTCTGTTTAGC
TTCTATTATATAGGAAATTGATCAGGATCAGGATCTTGGATTACAAATGC
AGCTGCTTTCATCCACTCTACAATTCAAATACATTTGGGAACAGTGGCGG
GTTTCACTCCAGCGACCAGGTCTAATTTGAGGTTTACGATGTCAATGCGG
GTTCGATAAATTTCACTTTGAAAATTATCTTAAATGTATAAGGCGGTCAT
CGAAAAAATGCTCTGTTCGCGTCGCAACGCGTGTTAAAAATGCATGCGGG
CGGACGGGCGGTCAAAAACATTCCCAGGTTTTTTTAATCACGCCAGTAAC
TCAGGGGCGGGTGGTAGCACGAGCAAAACAATTTTTCGATGGTCGTCAGA
GCAATTGAGAAAAAGCTATACTTTAAAAGAATAAATTGCTTTTCCCAGAT
TTTTTTCCCCATCTCCGCACCGGAAAATCAGCGGAAAATTTGATGCGGGT
GGGTGACGCGAATAGAACAATTTTTCGATGACCGCCTAACATTGCTTTTA
TCCACACCTCTTTGTGCAAACATAGACTTATAAAGCCCAAAGGGCTAGAT
GTCGTACTTTTGCTGAAAAGTATGCTGTGGTTGGATTGGAAATCCTACCT
AGGTCACGTGACATTACAGCAGAATTTCATGCTTGCCCAATCAGAAGCTT
CGTGGGTTTTCGAAAACAATAGCAACAATATTTTTTCCGATATTCAATTT
TTTTGCCTGCGATGGCTTAAAGCACGCCATCTAGCCCTTCGGGCTTTATA
AATATATGGGTGCAACTCTTGCCAACCATTTCATTGTTTCTTCCAGGCAG
GACAAGAATCATTCAGGAGTATCACCAGATCATATTACAGAGGAGCAGCC
GGTGCACTACTAGTATACGACATCACCAGGTTTGTTCACCACACAATAAT
TCTGGGTGTCCCAATAAAAATTTACATGTCTCCAAATGCTAATATTTTGA
CGTAATTTTGTTAAAACACATCTTTTTATATGTCAGTTTTTTGTGGTTTT
TTTTGCATATTTGCTTATAGAACAAATTATATTTCAAACTGATGTCTAAG
ATTTTAACACAATATGTAAAATGCCCTGAATTTCCTTTGTGTAAAATTTT
GTGTTGATTAGAAGTCAAAACGTCAGTTTATACCTGTTTGAAATCATGTA
AAGATTTTTTGGGAGACTGGTAGAAGGGTTGCTAGCTTTTATTTTAAAAC
TGTTCTACATTGTTAGGAGCCTTAAAGTATCGCTGTTATGTCTTAAGTGG
TTACTAAGCACTCATATAGCCAATGAATGAAATATGTATAGGAATCCTAA
AACACTGTCAACAAGAAGTTTTCATACTTTCACAAATTGTTACAAATATG
TTCTTTAATAAATAGATAGTTAAGTAATGAAATATTTTCTCTTCACAGGA
GGGACACATTCAACCACTTGACGACTTGGTTAGAAGACGCTCGACAACAT
TCCAGTTCCAATATGGTCATCATGCTTATCGGAAACAAAAGGTTTGTCAG
CAATAACTGTTATTGGTTTTCTTTACAATGTTTTGGTCTTATGAAATATG
ACTAGACAAATACAGAGATTGTCAATATCATCTATATAGTGGTGATGAAA
AAATGTCTCACAGATTCACGTCAATGACCTATAATAAGTCAGAAGAAATT
CTATAGAAGTTCGTTAGAATTCGCCATACGATCCTGAAAACCAAACCCCT
CTACATGGCGTTGTAGTTTATTGTTCTTAAACTTCTTGTAAATGTGTAAA
TTGTTTCTTAAATTCTTCTTTCTATTTTAGTGATTTAGAAGCCCGAAGAG
AAGTTAAAAAAGAAGAGGTATGTCTCGTTGGTCATATTTTCACCTCGTAA
ATCTTACTTAACTATTTGGGTGAGCTTTTTAAACCCGTGTGTTTTTTAGC
ACTCCAGTTTTCCTTGTTTAGGCTTCCTTTAATTTCATCTCAACTGACTG
GCAAAGGCACTGACAGTATTCTTTTTCTCAGCATTTTCGTTTTTGATTTT
TTGCAAGTTAACAAGAAGTTGAATCTATAGACTTCTACAGTTGATCTGTT
TTAAATTTTACTTTACTGCTGATCAAATTTTATTGTGGATGTTTTATTAC
TTAATTAGGGTGAAGCATTCGCTCGTGAACACGGTCTGATCTTCATGGAA
ACAAGCGCAAAGACAGCGGCCAATGTTGAAGAAGCATTCATCGGAACTGC
AAAAGAAATCTATCAAAAAATACAAGAAGGAATACTTGACTTAAATAACG
AAGTGAGTAGGGTAACATACAGTTAATCAGATTTGTGTATTAGTGGACAT
GAAAACACCTGTAATGTTTTACCTGTAGTATTTTTTGTGGCGTATTCTTT
AATTCCTGAACGAATGATGATGAAGAAAACTAATTCGTTTTTGCTGTAAT
GCTGATTTTGAATCTAGATTCTCGTTCCTGTACTTGATTCCTACTGTATT
CAAGTCAGGTGTCAATTATATATCAGTCTTTAAAGTGAAAAGTCTTCATT
ATTGAAAATATTCAAGACTTATTGAAATTTCTTTATTTTTTTTAGTCGAA
TGGAATCAAGATCGGACCACAACATTCAGCGGCTAGTCCTTCACCGATGG
GTGGCGGAGCCGGCGGCCAACAAGGTGGTGGTTGTTGTTGA Coding sequence (CDS) from alignment at sc0000021_pilon:404753..408193- >XLOC_041231 ID=XLOC_041231|Name=XLOC_041231|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1236bp|location=Sequence derived from alignment at sc0000021_pilon:404753..408193- (Clytia hemisphaerica_ch_hm2_pilon)
GAATTTATTTCTATTATTCATTCAGGTGTTGGGAAATCATGTTTACTCCT
TCAATTTACTGACAAACGTTTCCAACCAGTTCACGATTTAACGATCGGAA
TTTATTTCTATTATTCATTCAGGTGTTGGGAAATCATGTTTACTCCTTCA
ATTTACTGACAAACGTTTCCAACCAGTTCACGATTTAACGATCGGTGTTG
AATTTGGTGCCCGAATGATCACAATAGACGGAAAACAAATCAAACTTCAA
ATTTGGGACACAGTGTTGAATTTGGTGCCCGAATGATCACAATAGACGGA
AAACAAATCAAACTTCAAATTTGGGACACAGCAGGACAAGAATCATTCAG
GAGTATCACCAGATCATATTACAGAGGAGCAGCCGGTGCACTACTAGTAT
ACGACATCACCAGGCAGGACAAGAATCATTCAGGAGTATCACCAGATCAT
ATTACAGAGGAGCAGCCGGTGCACTACTAGTATACGACATCACCAGGAGG
GACACATTCAACCACTTGACGACTTGGTTAGAAGACGCTCGACAACATTC
CAGTTCCAATATGGTCATCATGCTTATCGGAAACAAAAGGAGGGACACAT
TCAACCACTTGACGACTTGGTTAGAAGACGCTCGACAACATTCCAGTTCC
AATATGGTCATCATGCTTATCGGAAACAAAAGTGATTTAGAAGCCCGAAG
AGAAGTTAAAAAAGAAGAGTGATTTAGAAGCCCGAAGAGAAGTTAAAAAA
GAAGAGGGTGAAGCATTCGCTCGTGAACACGGTCTGATCTTCATGGAAAC
AAGCGCAAAGACAGCGGCCAATGTTGAAGAAGCATTCATCGGAACTGCAA
AAGAAATCTATCAAAAAATACAAGAAGGAATACTTGACTTAAATAACGAA
GGTGAAGCATTCGCTCGTGAACACGGTCTGATCTTCATGGAAACAAGCGC
AAAGACAGCGGCCAATGTTGAAGAAGCATTCATCGGAACTGCAAAAGAAA
TCTATCAAAAAATACAAGAAGGAATACTTGACTTAAATAACGAATCGAAT
GGAATCAAGATCGGACCACAACATTCAGCGGCTAGTCCTTCACCGATGGG
TGGCGGAGCCGGCGGCCAACAAGGTGGTGGTTGTTGTTGATCGAATGGAA
TCAAGATCGGACCACAACATTCAGCGGCTAGTCCTTCACCGATGGGTGGC
GGAGCCGGCGGCCAACAAGGTGGTGGTTGTTGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000021_pilon | genome | sc0000021_pilon:404753..408193 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 544-639:97 |
| Aaloc | 400-543:534 |
| Aaloc | 364-399:861 |
| Aaloc | 271-360:1243 |
| Aaloc | 187-267:1846 |
| Aaloc | 121-186:2751 |
| Aaloc | 22-117:3442 |
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