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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000021_pilon:378724..380502+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041223 ID=XLOC_041223|Name=XLOC_041223|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1779bp|location=Sequence derived from alignment at sc0000021_pilon:378724..380502+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGGTATCCATCAATTTGAACAAAACAAACGCATATCAAAATGATCTATT
GGAAAGGATTGATACCTTCGCCACATATTCCGTTGAATGCAATATTCCAC
AAGGTGTGAATGTAACACATGAAAATGGAGTGAATATTACCAAAACAGCA
GATTTGGTTGAAGGTGTATCAAGTAAGTTAAAGATATCAGCAATTAAAAA
TTTCTATGAAACAACTTACATGGGACATAACGCAGCATGCCACATAAATC
ATATTAGTGGAGAAATCTTATAATTTTCTCATTTTACTGAGAACTTAAGA
ACAAATTGAGATTAGTTTCAGACTCAAATCTCGGAAATAGCCAAAAGAAT
ACTGAAGCAAGTAAGTTTatagactaaaaatattttcgatataAAGCCCA
CtttggtttttgaaaattaagGTTGGTCGAATTCTCCATAATTTTGTGTA
CAGGTTGATGCATTCTGAAAATGATGGTATTTTACTATATCTACTTTATC
TTTCTAGGTTCGACTGACGAATTCACTGTCTCGATAAATCTCCATAAATC
atcaaatttcaatgaaagtctTACATATCCTGCAGTTATTGATAGATTGG
GACGTTTTAATTTGGAACTTGAAATTGACACTGTTGCAAATTTGTATATT
ATTCCACGAGATTGTCATGGTACTTCTACATCTGATCGAGATGACGTCAT
TCGGGAAGCTATTGTCACTGACGGGTAATTCTTTTTGATTACATTTTCAT
TCTCAATCTTTAAATTCTGCTCTATTGAATAATGCAGGTTCCATATGATT
TGACCATGATTGATAAAAAATCACTCGCCGTATTGAACATTTCATCAAAA
CTTGTCATTTATACCCTAATAAGCGATAGGGAGATATGTGGTGAAAAATT
AGGTAGCTAGATTTCAGCATATGGCTTGAATCTTTACCCGTAACattaat
acaattttttgccatttcttactttctaaataaacaaacttgACAATTTC
AACACTGTTTTAGATGTCCCAATACTGACCACGTTTTCAAGGAAGAGTCT
ACCGCTGACAATGGAAAGAAATTCCGATTTTCATTGAACGTATTCCGATT
CAAAAACTCGAACGGTATGGTCTACATTCATTGCTCTGCTCACGTCTGTT
TGGAAGGAAGTAATACCACAGAATGTCAATTCGGTTGTGAACAAAACAGC
AGACGACGAAGACGTTCAGTGGAGGAGAATGCATTGACACTAAATGATGA
TCTTTCCAAAGATTATGACATTCGAACTGGATTGATTATCGTAACAGAAA
ATTCTAAAAGTAAGTTCCTGAAAATTTATGCTAGAAGTACTTTGGATAAG
CAATGCTAAGCTGtctctttttaacaatttccaTAAAACTTTAGAAAACA
GATTGTATCTACTTATTATGATCGAGTTGTGGAAATTATTACGGTATAAA
CATGAATGGTACAAAATTATAATAATTCTAGGCtcaatataaaaacattt
tcattaggaaatttaaaataaaagagcTATCGTCAGTTACCACATTTCCA
AATTTGTATTATCTTTCTAGATGACGACTCATTCCAACAAGACACCCAAG
AATCACCCAACAATACTCAATTCTTTCAAACCACGACCAATATCATTCTC
ATTGCAATCATCTTGGTAATGTTGACTTTAGTATGTTCTCTCTTGGTTTT
TGTTGGCTTACGTCGCCGTCGAAGTGGTTCAAAAAGATATAGTGTCCCTG
GATCTCCTTCGAAGATGGAAATGCATTAA Coding sequence (CDS) from alignment at sc0000021_pilon:378724..380502+ >XLOC_041223 ID=XLOC_041223|Name=XLOC_041223|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1788bp|location=Sequence derived from alignment at sc0000021_pilon:378724..380502+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGGTATCCATCAATTTGAACAAAACAAACGCATATCAAAATGATCTATT
GGAAAGGATTGATACCTTCGCCACATATTCCGTTGAATGCAATATTCCAC
AAGGTGTGAATGTAACACATGAAAATGGAGTGAATATTACCAAAACAGCA
GATTTGGTTGAAGGTGTATCAACAGGTATCCATCAATTTGAACAAAACAA
ACGCATATCAAAATGATCTATTGGAAAGGATTGATACCTTCGCCACATAT
TCCGTTGAATGCAATATTCCACAAGGTGTGAATGTAACACATGAAAATGG
AGTGAATATTACCAAAACAGCAGATTTGGTTGAAGGTGTATCAAGTTCGA
CTGACGAATTCACTGTCTCGATAAATCTCCATAAATCatcaaatttcaat
gaaagtctTACATATCCTGCAGTTATTGATAGATTGGGACGTTTTAATTT
GGAACTTGAAATTGACACTGTTGCAAATTTGTATATTATTCCACGAGATT
GTCATGGTACTTCTACATCTGATCGAGATGACGTCATTCGGGAAGCTATT
GTCACTGACGGGTTCGACTGACGAATTCACTGTCTCGATAAATCTCCATA
AATCatcaaatttcaatgaaagtctTACATATCCTGCAGTTATTGATAGA
TTGGGACGTTTTAATTTGGAACTTGAAATTGACACTGTTGCAAATTTGTA
TATTATTCCACGAGATTGTCATGGTACTTCTACATCTGATCGAGATGACG
TCATTCGGGAAGCTATTGTCACTGACGGATGTCCCAATACTGACCACGTT
TTCAAGGAAGAGTCTACCGCTGACAATGGAAAGAAATTCCGATTTTCATT
GAACGTATTCCGATTCAAAAACTCGAACGGTATGGTCTACATTCATTGCT
CTGCTCACGTCTGTTTGGAAGGAAGTAATACCACAGAATGTCAATTCGGT
TGTGAACAAAACAGCAGACGACGAAGACGTTCAGTGGAGGAGAATGCATT
GACACTAAATGATGATCTTTCCAAAGATTATGACATTCGAACTGGATTGA
TTATCGTAACAGAAAATTCTAAAAATGTCCCAATACTGACCACGTTTTCA
AGGAAGAGTCTACCGCTGACAATGGAAAGAAATTCCGATTTTCATTGAAC
GTATTCCGATTCAAAAACTCGAACGGTATGGTCTACATTCATTGCTCTGC
TCACGTCTGTTTGGAAGGAAGTAATACCACAGAATGTCAATTCGGTTGTG
AACAAAACAGCAGACGACGAAGACGTTCAGTGGAGGAGAATGCATTGACA
CTAAATGATGATCTTTCCAAAGATTATGACATTCGAACTGGATTGATTAT
CGTAACAGAAAATTCTAAAAATGACGACTCATTCCAACAAGACACCCAAG
AATCACCCAACAATACTCAATTCTTTCAAACCACGACCAATATCATTCTC
ATTGCAATCATCTTGGTAATGTTGACTTTAGTATGTTCTCTCTTGGTTTT
TGTTGGCTTACGTCGCCGTCGAAGTGGTTCAAAAAGATATAGTGTCCCTG
GATCTCCTTCGAAGATGGAAATGCATTAAATGACGACTCATTCCAACAAG
ACACCCAAGAATCACCCAACAATACTCAATTCTTTCAAACCACGACCAAT
ATCATTCTCATTGCAATCATCTTGGTAATGTTGACTTTAGTATGTTCTCT
CTTGGTTTTTGTTGGCTTACGTCGCCGTCGAAGTGGTTCAAAAAGATATA
GTGTCCCTGGATCTCCTTCGAAGATGGAAATGCATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000021_pilon | genome | sc0000021_pilon:378724..380502 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 688-894:1573 |
| Aaloc | 391-684:1015 |
| Aaloc | 175-387:510 |
| Aaloc | 1-171:1 |
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