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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000012_pilon:2837042..2841796- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041197 ID=XLOC_041197|Name=XLOC_041197|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4755bp|location=Sequence derived from alignment at sc0000012_pilon:2837042..2841796- (Clytia hemisphaerica_ch_hm2_pilon)
AAATGTGAAGACAATGATGCAGAATTCGAGACTTCGGACAAGCTAATAGA
TCATATGAGGGAAGCGCATGATTTCGCATCTAAGGTTAACTTGAAAGCAA
CAAAAACAAATGCGGGCAATAAAAGAGTGAAAGAAAGAAATCAGATTTTA
CCAAAGGTTGGTGATCGTGTTTTAGCAATGTGGGAGGTCTCCATGTGGCA
ATATTTTCATGCAACAATTAAGAAGAAAATAGAAGGTCAGTTGAGATATG
AGATTGATTGGGATGATGGAGATACAACAGGTTCGTTAATACCCAGCTGG
CACACAACGTCGTTTCAGCGTTCATCTAATGTTCACAACGTCCATATAAC
GTTAGATGAACGTTGAAACAACGTTGTGTGCCAGTTGGGTAAACTTCCTT
TTACGTCTACCTTAATATCATTTTTGTGTGTGATTTAACCATCGATGATT
TAACTCTGACAAAATGCCAGGATTCCTGGTGAAAAACTATTTTAGTTACT
TTCCTTTGCAACTTTGTCTGTCAACGCCTTATCAAGGGTAGCTTACATCA
GCTGGAAAAAACAACTATAGCATTCCAGTCCTGTTATTTCATTTGAACCT
AATAGTGTGGTCGTGTTACAAAAAAACAGGCTGTTTGTAGGAAAAAAATA
AGATCTAGCTGAAACTTTCTCCAGACCTTCTCTATAGGATGCTTATACCT
CAGGAAAAATTCCCCTAAAATCCCACTGGTGGAACATCCCTTTTTTGGGA
CATTTCTATTTTCCCCAGGCAAAACCCTAAGGGCGAAATTTTTTGAAAAT
TTCAAACTCATTTTCAGACATTATCAAGTATACCATTCGAAAGCTCTCGA
AAAACTATATAGAAGACTTTTAAACGGTTATAGCTGATTTCCTTACCTAA
CTCGAGATATTTCATGCGCAAGTTCCACTTTTCGCCACACTTTGGTCAAA
ATTGACCATAAATAGCATCTTCTGCGTGAATTATCTTGAGTTAGGTAATG
GAATCGGCTATACCCGTTTAAAAGTCTTCTATATAGTTTTTCGAGAGCTT
TCGAATGGTATACTTGATGATGTCTGAAAATGAGTTTGAAATTTTCAAAA
AATTTCGCCCTTAGGGTTTTGCCTGGGGAAAAAAGAAATGTCCCATAAAA
GGGATGTTCCACCAGTGGGATTTTAGGGGAATTTTTCCTGAGGCATAACC
ATCCTATAGAGAAGGTCTGGAGAAAGTTTCAGCTAGATCATATTGTTTTC
CCGTAAATTATGCTAAACAACCACACTATAATGTATTGGACGACCTTCCA
GTTGTTGTCTCGAACGCCCACGCCCCAGAGCAGTGTTTATTGGGTGGGTG
GCTGACCCCCAGCGGTCTCCTCCAAAATTGCCATGAAGATAGGGGGATGT
TTGAACTTGTTGTCCGATGAATTTTTACCTTGATTGTAGATCAAATATTG
AAGGTGAGTTTGTTTCACCCCTCTAACTATATCTTGTCTTTTTAGGTCGT
TTTGTGAATTACAGTAATCTTGCAGTTGATCGAGCACCAATAGCTCATGA
AATTGGTGTCGGTAGCATCATCTTATTTTCACAAGGTCAATATAGAGCAG
GACAAACACAGCTCACTGGTGGAATGAGGTAAAAATCTTGCTGAATTGTT
TAAAATTTTGAACGGAGTCTCCCAGTTGGTAGGGGTATAAGATGGCACGA
AGAATAGATCCCAACTTTCATAGATCTTTTCCAAGGCAGAAATTTCAAAT
AGATGAATACCCTTTTCTTACCGATAGCTCAATTATTTAAGAGACGCCTG
GAAATTCAAACACTAAGACGTTTGCATTTAAGTCTTATAGTTGTTTGCGC
GCTCTAAACCTCGAGTGAAGGTACTGGGTTTGAGTTTATTCTTTGTTTAT
GAGAAAAACAATGCAATGACTTCACACATTTGAAATTTGATATCAATCCT
TCCTCGAAAACTTTAAAAAATTCTTCTCAGGCTTTAAAGGTTGATAAGTG
AACACATTCGAGAATAAATCTTCATTACCAATCCGGAATCTCTTTTCTTT
TTTCATAGATGGCATCAAGGTCGTATCACGTCCATCACCAAACAACAAAA
CGGTGGCACCCTTTACAGTGGTGTACACACAAAGACAGAAGCTGATGGAA
AATTCTCCACATACAAAGGTTACTCTTATGAATTTCATAATCTGTATTTA
AACGATTTGAGAGTTGGGCCGAATGTTTTTGATTTGCTGGATGATGATGA
AGTCTCCGATGGGGAATGTGATGGAGTAGTTGATGCTGGTGATGTAGATG
TCTACTTCTCATGTTTCGGAAATGATGGAGATAATGCATACAGTCCGAAA
GCAGTTGCAGATGAGCTGAAAAGTAAAGGTATGATTTGCTTTCACAACGC
CGTTAAGCCAACGCTGTGTCCTAGCTTGGTAAAATGTCTCGAAAATGCCT
AAAGATACTTTAACAGATAAAACGTGAATCAGACCATTTTTCACTAACGA
AAAGTCAATAATGAGAGTCCAACCCTGGGGGAGGTACTTGGACAAAATAG
GTACTGGGCGGTAAGCATACCTTTTTTTCACACCTCAAAGTTCTCTCTAA
AGGTTTATAAACTCATCTCATCTCTACTTTTTCCTCAAAAAGAATCACGA
TTTTCGTAAAGAATTGGACTAAAACTTGCCTCTCCAAGGTTCCAGAAAAG
TTTAAACTTTCCTTGTCGACTTTCAATATTTGACTGGAGCGTGCCAAAAA
TTCCACCACTACTAAATCACTAGCTTAAAAAGCCTGATTTGATTCTTTTT
CTTTCTGATCTTTAGGAATCTCGGTGATTCAGAGTAAAGATTTGAGCAAT
GAACTTGATGCAGAAGCACGCTTGAATTCAATGAAACACGCTAACCTGAT
GATGAAGAAAGCCAAGGTCTTTGTAGCGTGCATTAGTGATCAGTACACGC
AAAACCAGACGTGTCGCATGGAATTCCAGTTTGCCAAATCAACCTTGAAG
AAGCCAGTTGTTCCAATTGTGTTTGGCGAAGGAAGAGAATGGCAGCTCTC
TGTTGTCGGTATGTCATTAGGTTCCATTTCTCGTGCCTATGGCTTCTCTT
ACTTCTTTTGTGAACTAGACATTAAGTGATTGAATTCCTAATGTGAGATT
CACAGTAAAAACTGAACTGTGAAGACTTATTGTAGTTTCATTCAGAAGTG
GTTTTTATGCGAGAAAAGAAAACTATTTTCCAATCACCAATGATCTCGAA
TGAGAGCTGAGTCAATGAACAATACGAGGTCTAAAGGCCAGTCTCTACTT
GCACGCGCTTCTATCGCACTTTTTGGCTTTGACACATTTCAATTTTTTCA
ACCGCTACGTCAGATTGCACCAATGGAGTTGCTTCATTTTTCTTTTGACC
AATAACTGGTAAATTGATACATCATTAAATTTCTCTTGTCTATATTCTGA
TATAGCTGTATAACACCGTAAACTTTGGTTTGGATACAAAAGTGTTCAAC
GTTTATTTTAGGAATGTTAATCAGTGGTGAGCTGTACATCGAAATCAAAG
AGAAATGCGATAGAGAAGCAAAAATCCAAAGTATGCTGACATCAATCTCT
TCACATTTGGATCTATCAAAAGTCAGCAATAATGGTGATGGAAACACAGT
ATCTGGTGGCGTTGATGTGGTGGATAACTCTAAACCACGTAAGAATGCTT
AAATTAAGTTTACATAATTCTTAAAAAATGTTTATTTGATTGTACAATGG
ACAAATTTACCTAAACTACGTAATCCTAATCGGGTCCTAAGCTCGGGTGT
CGACTCGACTCGACTCGTGACGGCACAACTCGGGTGACAAAGAAAATAAT
AATAATTCATTTTGCTAATTTTTTGAAGAAAATTCCAACATCTAGTAATT
GTCGAAAATGCTATGAGACAGCAGTATATTTAAGAATTTTAATGAAAGCA
ATGCTGTTAGCTAAATTGTAGGCGTTGCTTTATCTGCTAAAATACATTAG
AATAAGGTTATCATTTGTTTTTAGCTGACATTTTCATATCATACTGTTGG
ACAAATTCAACCATGGCTTTCCAAAGCAGTCAAATACCAAAAGCAGTTGG
AAGTGAGTATGCTGACCCCCGTCTCATTAAAAAGAAAATTGACGGGCATG
GCTTTACCACATGGTTAGACATAGAACAACTGAAATCAGGTGATCAGGGG
GTTGGAATGTTCGAGCAGTTAGCAAACGCACTGAAAGATACCAAAATGGT
GGTGGCATTCATTAGTGATGAGTATGCTAACAGTGTAAACTGCCGAATGG
AATTTCAATTCGCTTTTCGAACGATACAAAAACCAATTCTACCAGTCGTT
GTCGGAACAGGCGAAAAATGGAAACAGTCGGTTGTCGGGATTATGATCGG
TGTCAACGACGGTTTAGAGCCAATCAGTTTACAGGAAATCAAATCAAATG
AAGATTTCGACCAATCATTGAACAGTATTATGAAAAAAATCAGCGATATT
TTAGACAAAGACACTATCCCATTGGACCAAGCACCTGAACGGAAATCGAA
GAAACCGAAAGTCGGCGATCACATAATTTCTCATCACGTGGGCCATTGTT
ATTATACGGCCACTGTAGCGGAATATAACGCTTCGACTATGGAATATACG
GTCACGTGGGATGATGGAGATACTTCAGGGCGTGTTCAAAAGTATGATCA
GGTAAGAGTCGCCACTTACATTATTTCACTTTCATTTTCACAAATTATGT
TTTAA Coding sequence (CDS) from alignment at sc0000012_pilon:2837042..2841796- >XLOC_041197 ID=XLOC_041197|Name=XLOC_041197|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3768bp|location=Sequence derived from alignment at sc0000012_pilon:2837042..2841796- (Clytia hemisphaerica_ch_hm2_pilon)
AAATGTGAAGACAATGATGCAGAATTCGAGACTTCGGACAAGCTAATAGA
TCATATGAGGGAAGCGCATGATTTCGCATCTAAGGTTAACTTGAAAGCAA
CAAAAACAAATGCGGGCAATAAAAGAGTGAAAGAAAGAAATCAGATTTTA
CCAAAGGTTGGTGATCGTGTTTTAGCAATGTGGGAGGTCTCCATGTGGCA
ATATTTTCATGCAACAATTAAGAAGAAAATAGAAGGTCAGTTGAGATATG
AGATTGATTGGGATGATGGAGATACAACAGAAATGTGAAGACAATGATGC
AGAATTCGAGACTTCGGACAAGCTAATAGATCATATGAGGGAAGCGCATG
ATTTCGCATCTAAGGTTAACTTGAAAGCAACAAAAACAAATGCGGGCAAT
AAAAGAGTGAAAGAAAGAAATCAGATTTTACCAAAGGTTGGTGATCGTGT
TTTAGCAATGTGGGAGGTCTCCATGTGGCAATATTTTCATGCAACAATTA
AGAAGAAAATAGAAGGTCAGTTGAGATATGAGATTGATTGGGATGATGGA
GATACAACAGGTCGTTTTGTGAATTACAGTAATCTTGCAGTTGATCGAGC
ACCAATAGCTCATGAAATTGGTGTCGGTAGCATCATCTTATTTTCACAAG
GTCAATATAGAGCAGGACAAACACAGCTCACTGGTGGAATGAGGTCGTTT
TGTGAATTACAGTAATCTTGCAGTTGATCGAGCACCAATAGCTCATGAAA
TTGGTGTCGGTAGCATCATCTTATTTTCACAAGGTCAATATAGAGCAGGA
CAAACACAGCTCACTGGTGGAATGAGATGGCATCAAGGTCGTATCACGTC
CATCACCAAACAACAAAACGGTGGCACCCTTTACAGTGGTGTACACACAA
AGACAGAAGCTGATGGAAAATTCTCCACATACAAAGGTTACTCTTATGAA
TTTCATAATCTGTATTTAAACGATTTGAGAGTTGGGCCGAATGTTTTTGA
TTTGCTGGATGATGATGAAGTCTCCGATGGGGAATGTGATGGAGTAGTTG
ATGCTGGTGATGTAGATGTCTACTTCTCATGTTTCGGAAATGATGGAGAT
AATGCATACAGTCCGAAAGCAGTTGCAGATGAGCTGAAAAGTAAAGATGG
CATCAAGGTCGTATCACGTCCATCACCAAACAACAAAACGGTGGCACCCT
TTACAGTGGTGTACACACAAAGACAGAAGCTGATGGAAAATTCTCCACAT
ACAAAGGTTACTCTTATGAATTTCATAATCTGTATTTAAACGATTTGAGA
GTTGGGCCGAATGTTTTTGATTTGCTGGATGATGATGAAGTCTCCGATGG
GGAATGTGATGGAGTAGTTGATGCTGGTGATGTAGATGTCTACTTCTCAT
GTTTCGGAAATGATGGAGATAATGCATACAGTCCGAAAGCAGTTGCAGAT
GAGCTGAAAAGTAAAGGAATCTCGGTGATTCAGAGTAAAGATTTGAGCAA
TGAACTTGATGCAGAAGCACGCTTGAATTCAATGAAACACGCTAACCTGA
TGATGAAGAAAGCCAAGGTCTTTGTAGCGTGCATTAGTGATCAGTACACG
CAAAACCAGACGTGTCGCATGGAATTCCAGTTTGCCAAATCAACCTTGAA
GAAGCCAGTTGTTCCAATTGTGTTTGGCGAAGGAAGAGAATGGCAGCTCT
CTGTTGTCGGAATCTCGGTGATTCAGAGTAAAGATTTGAGCAATGAACTT
GATGCAGAAGCACGCTTGAATTCAATGAAACACGCTAACCTGATGATGAA
GAAAGCCAAGGTCTTTGTAGCGTGCATTAGTGATCAGTACACGCAAAACC
AGACGTGTCGCATGGAATTCCAGTTTGCCAAATCAACCTTGAAGAAGCCA
GTTGTTCCAATTGTGTTTGGCGAAGGAAGAGAATGGCAGCTCTCTGTTGT
CGGAATGTTAATCAGTGGTGAGCTGTACATCGAAATCAAAGAGAAATGCG
ATAGAGAAGCAAAAATCCAAAGTATGCTGACATCAATCTCTTCACATTTG
GATCTATCAAAAGTCAGCAATAATGGTGATGGAAACACAGTATCTGGTGG
CGTTGATGTGGTGGATAACTCTAAACCACGAATGTTAATCAGTGGTGAGC
TGTACATCGAAATCAAAGAGAAATGCGATAGAGAAGCAAAAATCCAAAGT
ATGCTGACATCAATCTCTTCACATTTGGATCTATCAAAAGTCAGCAATAA
TGGTGATGGAAACACAGTATCTGGTGGCGTTGATGTGGTGGATAACTCTA
AACCACCTGACATTTTCATATCATACTGTTGGACAAATTCAACCATGGCT
TTCCAAAGCAGTCAAATACCAAAAGCAGTTGGAAGTGAGTATGCTGACCC
CCGTCTCATTAAAAAGAAAATTGACGGGCATGGCTTTACCACATGGTTAG
ACATAGAACAACTGAAATCAGGTGATCAGGGGGTTGGAATGTTCGAGCAG
TTAGCAAACGCACTGAAAGATACCAAAATGGTGGTGGCATTCATTAGTGA
TGAGTATGCTAACAGTGTAAACTGCCGAATGGAATTTCAATTCGCTTTTC
GAACGATACAAAAACCAATTCTACCAGTCGTTGTCGGAACAGGCGAAAAA
TGGAAACAGTCGGTTGTCGGGATTATGATCGGTGTCAACGACGGTTTAGA
GCCAATCAGTTTACAGGAAATCAAATCAAATGAAGATTTCGACCAATCAT
TGAACAGTATTATGAAAAAAATCAGCGATATTTTAGACAAAGACACTATC
CCATTGGACCAAGCACCTGAACGGAAATCGAAGAAACCGAAAGTCGGCGA
TCACATAATTTCTCATCACGTGGGCCATTGTTATTATACGGCCACTGTAG
CGGAATATAACGCTTCGACTATGGAATATACGGTCACGTGGGATGATGGA
GATACTTCAGGGCGTGTTCAAAAGTATGATCAGGTAAGAGTCGCCACTTA
CATTATTTCACTTTCATTTTCACAAATTATGTTTTAACTGACATTTTCAT
ATCATACTGTTGGACAAATTCAACCATGGCTTTCCAAAGCAGTCAAATAC
CAAAAGCAGTTGGAAGTGAGTATGCTGACCCCCGTCTCATTAAAAAGAAA
ATTGACGGGCATGGCTTTACCACATGGTTAGACATAGAACAACTGAAATC
AGGTGATCAGGGGGTTGGAATGTTCGAGCAGTTAGCAAACGCACTGAAAG
ATACCAAAATGGTGGTGGCATTCATTAGTGATGAGTATGCTAACAGTGTA
AACTGCCGAATGGAATTTCAATTCGCTTTTCGAACGATACAAAAACCAAT
TCTACCAGTCGTTGTCGGAACAGGCGAAAAATGGAAACAGTCGGTTGTCG
GGATTATGATCGGTGTCAACGACGGTTTAGAGCCAATCAGTTTACAGGAA
ATCAAATCAAATGAAGATTTCGACCAATCATTGAACAGTATTATGAAAAA
AATCAGCGATATTTTAGACAAAGACACTATCCCATTGGACCAAGCACCTG
AACGGAAATCGAAGAAACCGAAAGTCGGCGATCACATAATTTCTCATCAC
GTGGGCCATTGTTATTATACGGCCACTGTAGCGGAATATAACGCTTCGAC
TATGGAATATACGGTCACGTGGGATGATGGAGATACTTCAGGGCGTGTTC
AAAAGTATGATCAGGTAAGAGTCGCCACTTACATTATTTCACTTTCATTT
TCACAAATTATGTTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012_pilon | genome | sc0000012_pilon:2837042..2841796 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1927-2655:730 |
| Aaloc | 1750-1923:1243 |
| Aaloc | 1507-1746:1939 |
| Aaloc | 1186-1503:2697 |
| Aaloc | 1054-1182:3259 |
| Aaloc | 772-1050:4756 |
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