XLOC_041191 (mRNA) -

Overview
NameXLOC_041191
Unique NameXLOC_041191
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000012_pilon:2790528..2792185+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041191 ID=XLOC_041191|Name=XLOC_041191|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1658bp|location=Sequence derived from alignment at sc0000012_pilon:2790528..2792185+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTAAAGATCAAAAATTAGTGAAAGAGCCTACAGTCCATCGACGCAA GTTGGTTATGGTAGGAGACGGCGCTTGTGGTAAAACAAGTTTATTGTACG TTTTCACCAAAGATGAGATGCCAACATCTTATGTTCCAACAATCTTTGAC AATTATGTTGCTGACATGGAAGTTGAAAATGGCAAACAGGTAACTAGACT ATGTTTTGTATTTATATGTTTTTGGGTGGTTTGGTTTTAAAGAGCAACCC CTAAAGTTGATTGAGCAAGagtcttattttttgtcaaaagtgcTGTGTTG ACCTTTCGCAACATACGTTTCAATACCACAGCCCTCAAACTAAAAGAGAC AGGGTAGATAGAGAGTTTTCTAATGAACTGATATTTTGGCAACCCACTGA CCTTATTCGAaacaaattttaagaagaaattTCAAACAGAAAAAGTCAAA CGTGAGAAAATTACTTGACAACAGAAATAAatattagaaattttgaaatg tcatGACCTAGcagtttatatttttaaagttataaaaacaaataaaaatc agacaatcatacaaaattgagaaaaaggtttctcaaaaaatctttaactg ACAATTAAAAAATACTACTTACTGTACCACATCAAAAACACAGACCTGAG AAAGaagtcgaaaaattgaaattcctgaCATTCCGATGGAAATGTCTAGA AAAGAAATCTGACAAGAGCTGAAAAGCAATCAATCCTTTTGTCTATATTC CTCTCTTATGAATACGATGTCGTTATTAGTTAATGACAGTTAGAGACAAC AACATTTTTCTTAGTAATAAAAACAGGAACCTAGTAGGCATTAAAACGGT AGCAAAACCCTAATACAAGAATTTCCGAATGGAATCAAAACACCCCTAGt tataaaaaacaataatattCAACAAACAAACTGTGACTCATGCAttatct tttacaaaaaatcttgACATTTTATATTGAGACAATTTTGTTAAAAGATA GTGAAGCCTTGCTTAAgtttttttgcagttttattattgttttgaagtat tttaattaatttgtttgttacaaatttCAAATATCTCTGGAAAAATAACT GAATCTAAAATTATTATAATACCATGGgaaatatcataaaaaatatatat caagtacatttttgtatgaaaaaaaattctatataTCTGATTCcaatttt tctctttatctttATAGGTTGAACTTGCATTATTCGACACTGCGGGACAA GAAGAATATGACCAACTCCGTATACTCATGTACCCGGATGCCGACGTTAT CGTTATCTGTTACAGCATTGATAGTCCGGACAGTTTCATGAATGTCGTCG AAAAATGGGCTCCAGAAGTCAAACATTTCTGTCCGGGAGTACCGATTATT TTATGCGGAAATAAAAAAGACTTGAGGAATAACGAAGATGTTAAGTTAAA GTTACAAGGACATAAACAAGTTCCCGTTCAAATTGAAGATGGTATTCAAG CCGCGCGGGCGATCGATGCGGTCTCTTTTGTTGAATGCTCGGCGCTAACA AAAGCAGGAGTAATGGATTTATTTGAAACGGCTGCTCGTTCGGCAATGGC TAAAAATTCtaagaagaaaaataagaaattcaagagtgcaaaatgttgtt tggTTTGA

Coding sequence (CDS) from alignment at sc0000012_pilon:2790528..2792185+

>XLOC_041191 ID=XLOC_041191|Name=XLOC_041191|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000012_pilon:2790528..2792185+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTAAAGATCAAAAATTAGTGAAAGAGCCTACAGTCCATCGACGCAA
GTTGGTTATGGTAGGAGACGGCGCTTGTGGTAAAACAAGTTTATTGTACG
TTTTCACCAAAGATGAGATGCCAACATCTTATGTTCCAACAATCTTTGAC
AATTATGTTGCTGACATGGAAGTTGAAAATGGCAAACAGATGGGTAAAGA
TCAAAAATTAGTGAAAGAGCCTACAGTCCATCGACGCAAGTTGGTTATGG
TAGGAGACGGCGCTTGTGGTAAAACAAGTTTATTGTACGTTTTCACCAAA
GATGAGATGCCAACATCTTATGTTCCAACAATCTTTGACAATTATGTTGC
TGACATGGAAGTTGAAAATGGCAAACAGGTTGAACTTGCATTATTCGACA
CTGCGGGACAAGAAGAATATGACCAACTCCGTATACTCATGTACCCGGAT
GCCGACGTTATCGTTATCTGTTACAGCATTGATAGTCCGGACAGTTTCAT
GAATGTCGTCGAAAAATGGGCTCCAGAAGTCAAACATTTCTGTCCGGGAG
TACCGATTATTTTATGCGGAAATAAAAAAGACTTGAGGAATAACGAAGAT
GTTAAGTTAAAGTTACAAGGACATAAACAAGTTCCCGTTCAAATTGAAGA
TGGTATTCAAGCCGCGCGGGCGATCGATGCGGTCTCTTTTGTTGAATGCT
CGGCGCTAACAAAAGCAGGAGTAATGGATTTATTTGAAACGGCTGCTCGT
TCGGCAATGGCTAAAAATTCtaagaagaaaaataagaaattcaagagtgc
aaaatgttgtttggTTTGAGTTGAACTTGCATTATTCGACACTGCGGGAC
AAGAAGAATATGACCAACTCCGTATACTCATGTACCCGGATGCCGACGTT
ATCGTTATCTGTTACAGCATTGATAGTCCGGACAGTTTCATGAATGTCGT
CGAAAAATGGGCTCCAGAAGTCAAACATTTCTGTCCGGGAGTACCGATTA
TTTTATGCGGAAATAAAAAAGACTTGAGGAATAACGAAGATGTTAAGTTA
AAGTTACAAGGACATAAACAAGTTCCCGTTCAAATTGAAGATGGTATTCA
AGCCGCGCGGGCGATCGATGCGGTCTCTTTTGTTGAATGCTCGGCGCTAA
CAAAAGCAGGAGTAATGGATTTATTTGAAACGGCTGCTCGTTCGGCAATG
GCTAAAAATTCtaagaagaaaaataagaaattcaagagtgcaaaatgttg
tttggTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041191XLOC_041191-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012_pilongenomesc0000012_pilon:2790528..2792185 +
Properties
Property NameValue
Aaloc190-630:1218
Aaloc1-189:1