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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000145_pilon:340286..344773+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041170 ID=XLOC_041170|Name=XLOC_041170|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4488bp|location=Sequence derived from alignment at sc0000145_pilon:340286..344773+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTTTGCAGACTGACAAATCTTTCTCTGGGTTTCTTCACTCAACCAACCA
ACACACATCTTCGCAcagcaaattttttgttttgtttactttcacacaaa
caaattttgtttactttcacacaaacaTAACAAATATGAGAAACACAAGC
GCcgcacaaaacaaaaaaacattggTTATCCCTTCCGGCTTTCAAGCCAT
GTTGGAAGCATTGGCTCGCGACGTCCTTATTCAGCAACCGGCCGACGTCG
AAGAATTTGCTGCGACTTTCTTCAGGtagatttatgatttttattatctc
cttatctttctttttatctACATTGATTAGATTTTGAGCTGCTTGAATAA
AAATTACGTTATTTACCGCAGCATTGTTGCACAACAGATGCTGTTGTATA
TTTGTCATTATCTTGGTTTCTGCACAGGCACCTAAGGCTaagattcccac
tcgcagcggttcacttgacAAGTAAACCAACCTTCGTCAGGGACAACTCA
TGCTATGTGAGGGGAATCGGGTAGCCAGTTCAAGATGCTGAAGGGGCGCT
CTTGGGAAGTGTCTATAGTTTCAAAAATGGGCCTCAGAGTCTCCTGCAat
tcaaccaaatagaaattgaaATAGAAGCATAGAAAGGCTTTAACCGACGT
TTGCTTTATAGTACTAATCTTACTTCTTAGCATTCAAATTCTACCAAACT
CATAAACAATCATAACTTTAATCTCTTAGTCTTAAGTCTTACACTTTCCA
AGCTTGTACACACTTATCACCCCttttcttttaagccctttgattttaat
atttatcaattattttattaaacaatcttgtattttaTATGTAGCGAAAA
TTTGGCCTTCGGGCCTGAtgttacttaaatatatagatagatagattatA
CATAGCTATAGTTTGATCTTCTTGATACATGTATAAACCCAGAAAACCCA
GGTAGACCAAAGCTTTCCCGACTAATGAAATAATGATCAAAGCAGATTTA
TTCTACCAGTTTAAGACTTTAGCCCCTCCATCATGTTCGTGTCCACTTTT
TACAAGTTATGTGCCTAATGTTGTTGTGCTTTTTGGCCCAGCGTAGCGAA
AAGGGCCTTTCAAATAGAAGTGTCTGTGGTTTGTGGTTTGTGGTTCGGTT
CGCCAAAAGTTTGCGATAACAgcgtcttgtttttttttcaatttcataac
tcttgatagacggtgatatactcTTTCGGTAatggttctttcaaagtaaa
caagggacggcgcacaatatgagcatatttatttttcttataagcatata
ctttataagaatcaaatcaataactcttgatagacgttGCAATGGCTTTT
AAATAACCTTCAGTGAATTTACTGAATTTATGAATACTGTCATgaccaat
tttgttaatttcaacACCGTTCTATAACAGTCTAACTTCCTCGGTGATTT
TAGTTTTCAACCTCATCAAGGAGAGCCTCTTCTTCTGCCTACATATTCAT
AATTTTAagttgctgggccttcacgccccaCGGGCTTCTTGTTATGTCTA
TTGATCACCTGGGGGCAAggttttaaacccttgtacTTTTAGAATTAAAA
ATGTGTTTATTTCTTTGTTAGTAATTTGTTAATGtctcatttcttttttt
ttatttgtttctttgtttattttgtttggttgattgtttatttattttct
ttattgtcattgctgttgttttctttatCTCGTCTTTGTTCTTTGCTGGT
CCTatgtttgtgttttttcttacaGTTGATTCTGTCTAGTTCGATATTTA
GAAGGGACCAATGATTTTCTTCGAACTAGCGAAAGGTTCGAAAAGCTTTT
TGACTCTCTTTCCATTCTAACAAATAGGGATGCACCAATAGGGcatggaa
atctcttattttggATAATCCAAGGCCTTTTTTGATAATAAACCTTAAAT
TTCTGTAAATTTTAGTCTATCAACTCACAAACATTTTTTACTTCTGCCGG
GGTTGCGACACCaataatattttcatattttTGtgcTTCCGACAGGAGTG
GAAAACAAGTATAGTGACTGCTATCTGACTATTACGGAGCTTCTTTCTTT
CCGTTACAtatataaaagcaaaaaattaaCTTTGGGAACGCAGTCAGAAG
TGAAACAAAGGATCCTTAACTATCTAACTGCTGGTAGGGGAGGGAGGGGA
CACTCTTTAACACTAGATTTATGGAGCCACTCTTTAATGAATGCAGTGAC
AAACtaacattttcattcattttcgaTCTATCTTGATATGTTTCTATCTT
ctcttttcttttaatttggaAAGATTATGCTATAGATTATACCTATACTT
TTTAAAGTCTAATGCTCAAGGTTTTGCACATTATAACCGTGTATGTTGAT
AGAATAAACTACTCTCCTGCACGGTTACTTCTTTTAATAACATATGATTT
ATGTAACTAGCCATATAAAAACCTTGttcaatcaaaaattcactGATACT
TGTTTTATCATTTCAGTCAACGCGTTCAGTCACGATGCTGTAAGGGACCA
TCTGCTACCTGCGACAAGACCTCTCCTTCATGTACACGCACAGCCACAGC
TGAGACTACCAACAGTCAAAAATCGGTCGAAACTTATAATGCTCCCGCGA
CATCCATCGTTAAGATGCAAGACTTTGAGTCCGATCTAGCTGAAATGGCT
ACTAAAGACTCGGGATGTTGTCCCTGTGCTGGTCAATCAGCGGCGTCCCC
ACCTTGTCAATCCGCAGCCGGAAGTGTTGCTTCGGAAGTATCAACAACAT
GTGCTTCTAAGAAAAAGTCATCCGTTGCTGCGGCGCTTATCGAGGCACCT
TCTAAAAAAGATTCGGTTGCCGTGAAAAAGTCATCCATTCAGGTAGCGAA
GAAACAAAGTAGCGTTGCTGCTGctaaaaaatcttcaatcaaGACTGAGC
GTAAATCAAGCACAAAAGCTCGTGTACTAAGCGGCACTGCTACTCGATCC
ACCGCTTCTGTTGAGAAACAAGCGAGTCCTGCTGCATCTAAGACCACTAC
CAAGGTGAGCCAAGCTAAGGTTACGTCGTCAGTTTGTTCGCGTAAGAGCT
CCGTAATGGCGAAAACTGCTTCCGTACAGTCCCGTAAATCAGACATCACG
TCTGCACGCAGCAAAGCCTCGACTGTAAGTCGAAAGCAACCACCCACGCC
AAATACAAGCGTCCAATCAGTCCGTTCAGTCAAGGATAAGATGTCCGCCC
AAGACACCGCCCAGCTTCTCGCAAAGGCATCTAGCCGACTAGTAGAAGAT
GCTTTGAAAAATGTGTCATCCAAAACTCAAGAGGAATGTAAATTTGAAGA
GGATGCTGTAATCGTTGAGGCAGACATCTCGTGCCCTCAGATTGTTGCAA
AGACTTCAGCCCTTGCTGAGAGTCCTGCCACAGAAGCAACCCACACTGAG
GTCCCTGAACCAGTTACCGACAGCCAAGAGCAGGCCATCGAACCTAAGGA
AGCTACACAAGAGGCTTCTCCTGAACCAGCTGCAGATGGCCAAGAGCTTG
CCAAACCAATTGAAGCTAAGACCGAATCTGCCGCCGCTGTTTCTACTGAA
CCAGCTAAAATGACTTCCTCAGCACAAGCTGTTGAAACTACACAAGATTC
ACCTACTGAAGCCAGCCAAGTGTCTGAATCTGTTCCTGAGCCTGCTGCTG
AAACTGTCTCAGCTGAGGCTGAACCTAAAGTCGTTGAGGCTACTGAACCC
GATTCTGAGGCTTCCTCAGAGCCAGCAGCTCCTGCTGAAACTACTGAAGC
AGCCCCTGAACCCCAAGAAGCAAGCCAAGAGACTGCTATTGAATCAGAAG
CCAATGCTGAATCTAACCCCTCAGTACCAGCTTCTGCTGAAGTCAGTCAG
GAACAACAAGCTGACGGTACCCAGGCCGATAAGCCATCTGAGACTCCCGT
GGCTCAAGAGGAACCAGCCGGTGAATCGGTTCCCGAATCCACCCAAGAAC
CGACTGCTGAGAATGTAGAAGCCCCATTAGAAACATCAGTGGAAGCTTCC
CAAGAACCAGCAGCTAACTCTGAACCATCCACTGATGGTGTACCTGAAAC
CTCTGGTGATGTTGAAGAGTCTGTATTAGAAACAGTGGGGGCCATCCCTG
CTGAAGCTACTCAAGAACCATCTGCTTCTGAACCAGCTGCCGCCCCATCC
ATACAGGCTTCTCCTGAACTGGCTACTGACGGTCAAGAGCAAGCTTCTGC
CCCTGTTGAAGCTACCAAGGAACCATTTGCACAGGAAGCTGCCCAAGAGC
CAACTGCCCCGCAACCCTCCCCTGAATCAGAGGCTACTGAAGCTAACCAA
GAACCAGAAGCTACTGCTGAAGCCAGTCAGGAGCAACTAGCTGATGCTAA
CCAGGCTGATACCCCACCTGAGACCGCTCAAGTGACAACTGAAGCTGCCT
CGCAAGAACCAGCCCCTGTCAGTGCTGGATCAGCATAA Coding sequence (CDS) from alignment at sc0000145_pilon:340286..344773+ >XLOC_041170 ID=XLOC_041170|Name=XLOC_041170|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4494bp|location=Sequence derived from alignment at sc0000145_pilon:340286..344773+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTTTGCAGACTGACAAATCTTTCTCTGGGTTTCTTCACTCAACCAACCA
ACACACATCTTCGCAcagcaaattttttgttttgtttactttcacacaaa
caaattttgtttactttcacacaaacaTAACAAATATGAGAAACACAAGC
GCcgcacaaaacaaaaaaacattggTTATCCCTTCCGGCTTTCAAGCCAT
GTTGGAAGCATTGGCTCGCGACGTCCTTATTCAGCAACCGGCCGACGTCG
AAGAATTTGCTGCGACTTTCTTCAGAGTTTGCAGACTGACAAATCTTTCT
CTGGGTTTCTTCACTCAACCAACCAACACACATCTTCGCAcagcaaattt
tttgttttgtttactttcacacaaacaaattttgtttactttcacacaaa
caTAACAAATATGAGAAACACAAGCGCcgcacaaaacaaaaaaacattgg
TTATCCCTTCCGGCTTTCAAGCCATGTTGGAAGCATTGGCTCGCGACGTC
CTTATTCAGCAACCGGCCGACGTCGAAGAATTTGCTGCGACTTTCTTCAG
TCAACGCGTTCAGTCACGATGCTGTAAGGGACCATCTGCTACCTGCGACA
AGACCTCTCCTTCATGTACACGCACAGCCACAGCTGAGACTACCAACAGT
CAAAAATCGGTCGAAACTTATAATGCTCCCGCGACATCCATCGTTAAGAT
GCAAGACTTTGAGTCCGATCTAGCTGAAATGGCTACTAAAGACTCGGGAT
GTTGTCCCTGTGCTGGTCAATCAGCGGCGTCCCCACCTTGTCAATCCGCA
GCCGGAAGTGTTGCTTCGGAAGTATCAACAACATGTGCTTCTAAGAAAAA
GTCATCCGTTGCTGCGGCGCTTATCGAGGCACCTTCTAAAAAAGATTCGG
TTGCCGTGAAAAAGTCATCCATTCAGGTAGCGAAGAAACAAAGTAGCGTT
GCTGCTGctaaaaaatcttcaatcaaGACTGAGCGTAAATCAAGCACAAA
AGCTCGTGTACTAAGCGGCACTGCTACTCGATCCACCGCTTCTGTTGAGA
AACAAGCGAGTCCTGCTGCATCTAAGACCACTACCAAGGTGAGCCAAGCT
AAGGTTACGTCGTCAGTTTGTTCGCGTAAGAGCTCCGTAATGGCGAAAAC
TGCTTCCGTACAGTCCCGTAAATCAGACATCACGTCTGCACGCAGCAAAG
CCTCGACTGTAAGTCGAAAGCAACCACCCACGCCAAATACAAGCGTCCAA
TCAGTCCGTTCAGTCAAGGATAAGATGTCCGCCCAAGACACCGCCCAGCT
TCTCGCAAAGGCATCTAGCCGACTAGTAGAAGATGCTTTGAAAAATGTGT
CATCCAAAACTCAAGAGGAATGTAAATTTGAAGAGGATGCTGTAATCGTT
GAGGCAGACATCTCGTGCCCTCAGATTGTTGCAAAGACTTCAGCCCTTGC
TGAGAGTCCTGCCACAGAAGCAACCCACACTGAGGTCCCTGAACCAGTTA
CCGACAGCCAAGAGCAGGCCATCGAACCTAAGGAAGCTACACAAGAGGCT
TCTCCTGAACCAGCTGCAGATGGCCAAGAGCTTGCCAAACCAATTGAAGC
TAAGACCGAATCTGCCGCCGCTGTTTCTACTGAACCAGCTAAAATGACTT
CCTCAGCACAAGCTGTTGAAACTACACAAGATTCACCTACTGAAGCCAGC
CAAGTGTCTGAATCTGTTCCTGAGCCTGCTGCTGAAACTGTCTCAGCTGA
GGCTGAACCTAAAGTCGTTGAGGCTACTGAACCCGATTCTGAGGCTTCCT
CAGAGCCAGCAGCTCCTGCTGAAACTACTGAAGCAGCCCCTGAACCCCAA
GAAGCAAGCCAAGAGACTGCTATTGAATCAGAAGCCAATGCTGAATCTAA
CCCCTCAGTACCAGCTTCTGCTGAAGTCAGTCAGGAACAACAAGCTGACG
GTACCCAGGCCGATAAGCCATCTGAGACTCCCGTGGCTCAAGAGGAACCA
GCCGGTGAATCGGTTCCCGAATCCACCCAAGAACCGACTGCTGAGAATGT
AGAAGCCCCATTAGAAACATCAGTGGAAGCTTCCCAAGAACCAGCAGCTA
ACTCTGAACCATCCACTGATGGTGTACCTGAAACCTCTGGTGATGTTGAA
GAGTCTGTATTAGAAACAGTGGGGGCCATCCCTGCTGAAGCTACTCAAGA
ACCATCTGCTTCTGAACCAGCTGCCGCCCCATCCATACAGGCTTCTCCTG
AACTGGCTACTGACGGTCAAGAGCAAGCTTCTGCCCCTGTTGAAGCTACC
AAGGAACCATTTGCACAGGAAGCTGCCCAAGAGCCAACTGCCCCGCAACC
CTCCCCTGAATCAGAGGCTACTGAAGCTAACCAAGAACCAGAAGCTACTG
CTGAAGCCAGTCAGGAGCAACTAGCTGATGCTAACCAGGCTGATACCCCA
CCTGAGACCGCTCAAGTGACAACTGAAGCTGCCTCGCAAGAACCAGCCCC
TGTCAGTGCTGGATCAGCATAATCAACGCGTTCAGTCACGATGCTGTAAG
GGACCATCTGCTACCTGCGACAAGACCTCTCCTTCATGTACACGCACAGC
CACAGCTGAGACTACCAACAGTCAAAAATCGGTCGAAACTTATAATGCTC
CCGCGACATCCATCGTTAAGATGCAAGACTTTGAGTCCGATCTAGCTGAA
ATGGCTACTAAAGACTCGGGATGTTGTCCCTGTGCTGGTCAATCAGCGGC
GTCCCCACCTTGTCAATCCGCAGCCGGAAGTGTTGCTTCGGAAGTATCAA
CAACATGTGCTTCTAAGAAAAAGTCATCCGTTGCTGCGGCGCTTATCGAG
GCACCTTCTAAAAAAGATTCGGTTGCCGTGAAAAAGTCATCCATTCAGGT
AGCGAAGAAACAAAGTAGCGTTGCTGCTGctaaaaaatcttcaatcaaGA
CTGAGCGTAAATCAAGCACAAAAGCTCGTGTACTAAGCGGCACTGCTACT
CGATCCACCGCTTCTGTTGAGAAACAAGCGAGTCCTGCTGCATCTAAGAC
CACTACCAAGGTGAGCCAAGCTAAGGTTACGTCGTCAGTTTGTTCGCGTA
AGAGCTCCGTAATGGCGAAAACTGCTTCCGTACAGTCCCGTAAATCAGAC
ATCACGTCTGCACGCAGCAAAGCCTCGACTGTAAGTCGAAAGCAACCACC
CACGCCAAATACAAGCGTCCAATCAGTCCGTTCAGTCAAGGATAAGATGT
CCGCCCAAGACACCGCCCAGCTTCTCGCAAAGGCATCTAGCCGACTAGTA
GAAGATGCTTTGAAAAATGTGTCATCCAAAACTCAAGAGGAATGTAAATT
TGAAGAGGATGCTGTAATCGTTGAGGCAGACATCTCGTGCCCTCAGATTG
TTGCAAAGACTTCAGCCCTTGCTGAGAGTCCTGCCACAGAAGCAACCCAC
ACTGAGGTCCCTGAACCAGTTACCGACAGCCAAGAGCAGGCCATCGAACC
TAAGGAAGCTACACAAGAGGCTTCTCCTGAACCAGCTGCAGATGGCCAAG
AGCTTGCCAAACCAATTGAAGCTAAGACCGAATCTGCCGCCGCTGTTTCT
ACTGAACCAGCTAAAATGACTTCCTCAGCACAAGCTGTTGAAACTACACA
AGATTCACCTACTGAAGCCAGCCAAGTGTCTGAATCTGTTCCTGAGCCTG
CTGCTGAAACTGTCTCAGCTGAGGCTGAACCTAAAGTCGTTGAGGCTACT
GAACCCGATTCTGAGGCTTCCTCAGAGCCAGCAGCTCCTGCTGAAACTAC
TGAAGCAGCCCCTGAACCCCAAGAAGCAAGCCAAGAGACTGCTATTGAAT
CAGAAGCCAATGCTGAATCTAACCCCTCAGTACCAGCTTCTGCTGAAGTC
AGTCAGGAACAACAAGCTGACGGTACCCAGGCCGATAAGCCATCTGAGAC
TCCCGTGGCTCAAGAGGAACCAGCCGGTGAATCGGTTCCCGAATCCACCC
AAGAACCGACTGCTGAGAATGTAGAAGCCCCATTAGAAACATCAGTGGAA
GCTTCCCAAGAACCAGCAGCTAACTCTGAACCATCCACTGATGGTGTACC
TGAAACCTCTGGTGATGTTGAAGAGTCTGTATTAGAAACAGTGGGGGCCA
TCCCTGCTGAAGCTACTCAAGAACCATCTGCTTCTGAACCAGCTGCCGCC
CCATCCATACAGGCTTCTCCTGAACTGGCTACTGACGGTCAAGAGCAAGC
TTCTGCCCCTGTTGAAGCTACCAAGGAACCATTTGCACAGGAAGCTGCCC
AAGAGCCAACTGCCCCGCAACCCTCCCCTGAATCAGAGGCTACTGAAGCT
AACCAAGAACCAGAAGCTACTGCTGAAGCCAGTCAGGAGCAACTAGCTGA
TGCTAACCAGGCTGATACCCCACCTGAGACCGCTCAAGTGACAACTGAAG
CTGCCTCGCAAGAACCAGCCCCTGTCAGTGCTGGATCAGCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000145_pilon | genome | sc0000145_pilon:340286..344773 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1969-2250:4207 |
| Aaloc | 277-1965:2518 |
| Aaloc | 1-273:1 |
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