|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000145_pilon:409051..410370+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041166 ID=XLOC_041166|Name=XLOC_041166|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1320bp|location=Sequence derived from alignment at sc0000145_pilon:409051..410370+ (Clytia hemisphaerica_ch_hm2_pilon)
aactatggcattataattatgaaaaagatttcaatgcTACAAAATAGTTT
TCTTGTCATACTTATTATCTGCTTGACAATAGTAATAAAAGGTTTGTATT
TCATctatattttcatcttcaaatttcaTCTAACTGTATTTTCTTCCTGT
AAAGTTATCGAATTTCgatgaaaactaatttttacaCATTTTGTTCACAT
TCCACCtaattttacaaaagttccCTATTAATCTGCGCTATTTTTTCACA
AGCAACTCCAATTATTAGGTCAACCCTGGgagcttagcattctagctcat
tttctaaTTATAAGCtttttttGCCATACATACAGCATGCAAAGTATAAC
ATTTCAATATCATTCTATGATTTTTCTCTCTTCAGAATATTATTTACCAA
GCTTTATATGGACAAATCAGCAGCACCCTTTGCTAAAAATCATCCATCGA
AGTCCATTATACCcaaataaactttgtttgagcGGCTACTATAAAAATAT
TCTGCTACTTGTTAATTTTAATCATCCGTTTTACGACAATATCCCAATGA
TCAGGTCACTTTACGAGCGAGCATTTCCTAATATGGTATTCTACGGTAca
aaaaaatctcgaaaattcaACGTTCACAAAATCGAGTCACACAAAGGATA
TTTCAGTTATATTGCTTTGGCAGACGCAatggaaaaatatacaaatttca
CTGGCTATCTTTTAATCAACGATGACTTATTAATACACCCGTGGTCACTT
TTAAAACttgatcaaaataaaatttgggaAGGACCGAAATGGCCAATCGC
TGTTGCGAATTTGAGCGCGTTTGACCACTGGTATTGGTGGAACAGTCGAT
GGGGTTTAAAGAAATGTCTTTTAGCTCGACAATTAGCAATGAcgaaatat
tcaaatttaataTCAACTTTACACGACCCTGAAAATACAACCGATCAAAG
ATTAGATTGTTATCGCGGACGTGCTGATATATTTTACGTACCTAAACACA
AATGgaaaactttttccaaactttcaaagatatttcatgaaaataatGTA
TTCTTAGAGATTGCTGTACCGACTATACTCCGAATGATTTCGACCAGCTC
CGAAAGAGAATTCCTGGACGGGATTTACCTACCCGGGCGAGTGAACTCTT
CCGTTATCCGGGACACCCGGTATCTTTGGAGTCATTACCAGGATGATTTA
CATTTTATTCATCCGGTTAAGCTACGATACGGAGATGAAGGTACTTCTTT
GAATCGTTTTGTTTTGGATACTTTTGTAAAGCCAAAATTtgattcaattt
tgaattgcaCAAGGAATTAA Coding sequence (CDS) from alignment at sc0000145_pilon:409051..410370+ >XLOC_041166 ID=XLOC_041166|Name=XLOC_041166|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2052bp|location=Sequence derived from alignment at sc0000145_pilon:409051..410370+ (Clytia hemisphaerica_ch_hm2_pilon)
aactatggcattataattatgaaaaagatttcaatgcTACAAAATAGTTT
TCTTGTCATACTTATTATCTGCTTGACAATAGTAATAAAAGaactatggc
attataattatgaaaaagatttcaatgcTACAAAATAGTTTTCTTGTCAT
ACTTATTATCTGCTTGACAATAGTAATAAAAGAATATTATTTACCAAGCT
TTATATGGACAAATCAGCAGCACCCTTTGCTAAAAATCATCCATCGAAGT
CCATTATACCcaaataaactttgtttgagcGGCTACTATAAAAATATTCT
GCTACTTGTTAATTTTAATCATCCGTTTTACGACAATATCCCAATGATCA
GGTCACTTTACGAGCGAGCATTTCCTAATATGGTATTCTACGGTAcaaaa
aaatctcgaaaattcaACGTTCACAAAATCGAGTCACACAAAGGATATTT
CAGTTATATTGCTTTGGCAGACGCAatggaaaaatatacaaatttcaCTG
GCTATCTTTTAATCAACGATGACTTATTAATACACCCGTGGTCACTTTTA
AAACttgatcaaaataaaatttgggaAGGACCGAAATGGCCAATCGCTGT
TGCGAATTTGAGCGCGTTTGACCACTGGTATTGGTGGAACAGTCGATGGG
GTTTAAAGAAATGTCTTTTAGCTCGACAATTAGCAATGAcgaaatattca
aatttaataTCAACTTTACACGACCCTGAAAATACAACCGATCAAAGATT
AGATTGTTATCGCGGACGTGCTGATATATTTTACGTACCTAAACACAAAT
GgaaaactttttccaaactttcaaagatatttcatgaaaataatGTATTC
TTAGAGATTGCTGTACCGACTATACTCCGAATGATTTCGACCAGCTCCGA
AAGAGAATTCCTGGACGGGATTTACCTACCCGGGCGAGTGAACTCTTCCG
TTATCCGGGACACCCGGTATCTTTGGAGTCATTACCAGGATGATTTACAT
TTTATTCATCCGGTTAAGCTACGATACGGAGATGAAGGTACTTCTTTGAA
TCGTTTTGTTTTGGATACTTTTGTAAAGCCAAAATTtgattcaattttga
attgcaCAAGGAATTAAAATATTATTTACCAAGCTTTATATGGACAAATC
AGCAGCACCCTTTGCTAAAAATCATCCATCGAAGTCCATTATACCcaaat
aaactttgtttgagcGGCTACTATAAAAATATTCTGCTACTTGTTAATTT
TAATCATCCGTTTTACGACAATATCCCAATGATCAGGTCACTTTACGAGC
GAGCATTTCCTAATATGGTATTCTACGGTAcaaaaaaatctcgaaaattc
aACGTTCACAAAATCGAGTCACACAAAGGATATTTCAGTTATATTGCTTT
GGCAGACGCAatggaaaaatatacaaatttcaCTGGCTATCTTTTAATCA
ACGATGACTTATTAATACACCCGTGGTCACTTTTAAAACttgatcaaaat
aaaatttgggaAGGACCGAAATGGCCAATCGCTGTTGCGAATTTGAGCGC
GTTTGACCACTGGTATTGGTGGAACAGTCGATGGGGTTTAAAGAAATGTC
TTTTAGCTCGACAATTAGCAATGAcgaaatattcaaatttaataTCAACT
TTACACGACCCTGAAAATACAACCGATCAAAGATTAGATTGTTATCGCGG
ACGTGCTGATATATTTTACGTACCTAAACACAAATGgaaaactttttcca
aactttcaaagatatttcatgaaaataatGTATTCTTAGAGATTGCTGTA
CCGACTATACTCCGAATGATTTCGACCAGCTCCGAAAGAGAATTCCTGGA
CGGGATTTACCTACCCGGGCGAGTGAACTCTTCCGTTATCCGGGACACCC
GGTATCTTTGGAGTCATTACCAGGATGATTTACATTTTATTCATCCGGTT
AAGCTACGATACGGAGATGAAGGTACTTCTTTGAATCGTTTTGTTTTGGA
TACTTTTGTAAAGCCAAAATTtgattcaattttgaattgcaCAAGGAATT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000145_pilon | genome | sc0000145_pilon:409051..410370 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 94-1026:388 |
| Aaloc | 1-90:1 |
|
