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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:436090..439759- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041094 ID=XLOC_041094|Name=XLOC_041094|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3670bp|location=Sequence derived from alignment at sc0000006_pilon:436090..439759- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAGCACCAAGCAAGTCTTGGAAGAGTCAATGAGACAAAATGCGGA
CAGAATAGACCAATCTGAAGTGTTATCTTGGAAATCACTTTTTCTGGCAA
AAGCAAAACTAAAAGCATCCAGTAGAACTTCAGGGTTAATGTCAGGGTTT
GCAATGGTAAGTTCTTTATAATTGTTACAGTTTTCACTATTGATTATTGA
TGTTTTCAAGTTTTGTTTTGAAACAGTCAGGAGTTTCTGCCTAATTAAAT
AGCCAGTATGGATTTTGTGTAACTCAGTGTAGACCTAAAGCTCTAAAGCA
GGATCTAATAACATGAAAACCAGAATATGATTCTTCAATGGGAATCAAAA
CTATAAAGTGCACTTACAAACATCAATTTGTCAGATCTAACAAAATTAAT
AACCGCACTGTCATCATTGACAATAAAACAAACAATTTTCTGTCAAGAGC
CTTGTAAACATTCCAACAACTTCCATCGAAATGATCTATCACAGCTCAGT
CTACCATTTTTAGCGCGGTCCGAGGATTGAGCCGAGAACGCTCCGCGAAC
TCCTGCGCGGGTGACAAACTTCAATCTGTCAATCGTTTTCTCAAGCGAAG
AGTATGCGAAGCGATTCTAGCTTTACGATAGTGCCGTGGGTCATCAATGG
ATAGTATTCAATGATCATTATCCCTTTATTTTCATTCCTAGAACTTTTGC
AAAAAAAAGGAAAAATAGAAAAGTTGTATTTTTTACTGCTCTATTCACAT
ACTGAATTTGAAAGATCTTCTATGTGGCTTTTTTTTGCAAACTTCAAAAA
ACTGATCTTCGTCCCGCCTTTGCGGGACTTTGGCTTAAGTGCTTGAGTGC
AGCATAGGGTACAAAGTCCAAATATGCGTTTCCCGTAATTTTTGTATGAA
CAGTTAGGTCTATACTGTAACTAACGCTGAAGATCTTCGGCATACAACTG
AAACATTTTGGTGCATTGGCGTAAGGGTACTTACAAAGATTGTTTGATTT
TCAGTTGGCGTAAAGTAATAATTCCAGCTCGGCGTAAATGACTCCATAAT
CCATCGATTTTTAGCTTTCATTTGGCTAAATTTGCTTCCGCTCGCTTACG
CTCACGTCAATTTATTAATCATGTTGTTGGCGCATGCGCCTCTTTTCCCA
TCTTGCACCCTTATTGAAAAATTGAATGTTGGTACAAAAGAAATTTTGCT
TGGCGTGATGCTTGCCAGTGTAGACCTAAAGCTCTAAAACAGCATCTAAT
AACATGAAAACCAGAATATGATTCTTCAATGGGAATCAAAACTATACTGT
AAAGTGCACTTACATCGAAATGATCTATCACAGCTCAGTCTACCATTTTT
AGCGCGGTCCGAGGATTGAGCCGAGAACTCTCGCAGAGCGCCCGAGCTCC
TGCGTGGCGCGCACCGCGGGGATGAAAAACTTCAATCTGTCAATCATTTT
CTCAAGCGAAGAGTACCAAAGCGGTTCTAGCTTTACGATAGGGCCGCGGA
TCATCAATGGATAGTATTCAATTATCATTATCCCTTTATTTTCATTCCTA
GAACTTTTGCCAAAAAAAGGAAAAATAGAAAAGTTTTATTTTTTACTGCT
CTATTCACATACTGAATTTGAAAGATCTTCTATGTGGCGTTTTTTTGCAG
ACTTCAAAAAACTGATTTTTGTCCCGCCTTTGCGGGACTTTGGCTTAAGT
GCTCGAGTGCAGCATAGGGTACAAAGTCCAAACATGCGTTTCCCGTAATT
TTTGTGTGAAGAGTTAGGTCTACACTGCTTGCTGTACGGAAAAATATCTT
AAGCGCGAGATTTCGTGGAATCCATCATACTGGCTAATTAGGGGAAAGTT
TTTTAGGAGAGAACCATCCAAACTCATTCAGACAGTTACCGTAAATCACC
GATTAAGCGCCCCGCTTGAATTAGCGCCCCGCTCGAATAAGCGCCCCCCA
TTTAGTTAAAATAATTTTATAAGCGCCCCCTTTGAATAAGCGCCCCCTCC
AGGGAGGGGCGCTTATTCGAATTGGTGGCCTAGGCTAATTTCCGGGATAA
GATATTGTTATTGATTGAATAAGATATTGTCTTAAAAAGAAAAAAAAACG
ATTAAGAATAAAATGATAGAAATTGTCAATTGGATTTTTATTTATTCATC
CTTTTTTGAAGTTAAGTTTAAGCAGATTCCGAATTTGTTGATATACGAAT
TTCTGAAATAAAAAAATAAGCGCCCCGCTTGAATAAGTGCCCCGCTTGAA
TAAGCGCCCCCCTCAGAGCCTGAAAAATTAAATAAGCGCCCGGGCGCTTA
ATCGGTGATTTACGGTAGTCACACTAGGGAATCAAGCTTTCAGAAAAACA
ACATCAGTCATCTACAGGATGTACTTGCAACAACAAGGATTACCGTCAAC
TGCTCTAACTTGGGACGATTGGTAGAAACATGGGACTTGTTGATATCCAG
CCTGTATTTTCACTTACTGTTAAATCTCTTTGACAACAAATTTGTTTTGA
TAACTCCACCAAGTTTATCAATCATACTTCTTCGTTCCTCTTAGAGTGCA
CAGACACTCGCGTGTGTTCCACTACAGATTTTTTTCATATTTCGATTTAA
AAGCCTACTCAGTTCCATCAATATGCCAAAAACATTTTGTTCAACCACCT
TCACTTCATGATAGGCTACCATAGAATGAACTTCCTTTTATAGGACGAAC
CCTATTCATGTGGCTTTCAGCCACTACTTTTGTTGTGAAGAAGAATATTA
GTTTTTCAAAAAATGAAAATTTTGTTGTTTGTGATCTGTCTCCACATAGA
TCCATTGCAGAATATATTTTCGGATTAAGTTTTATCTTGTTTTTACTGAA
GCTGTCATATGGTCAAAGTTCCAAAAATCCATTTCTTACTCTCATTTCTC
TCGTTTAGAAAGACAAAATTTTGTTTATTATATTTCTTGTAAATAAAGCA
GTTGCAGATCTTGCTATGAAACTATAAAATAGAACTTAGAATTTCTTTAG
TCTACATGATAGACAGCTGCAGACTTTTAGGCTTTACCTAAGAGTAGGAG
TTTTATGCTCGAAGCGATGGAAGATATGATGTAGCCTACCATTTCTTACT
CCCTTCAAACTAAGAAAATATTTTTCTTTTTAGGTTGCTATGGTGGAGAT
TAACCTAGATACTGGAGTCCCTCAAGGACTTGCCATCTTGTTTAGTTTTA
CAACTACCATTTTGATTTCAGTACACGTGTTTGCACTAATGATCTCAACG
TGTATTTTACCAAATATCGAAACAGTCGAATTGATGCATAATAGCGTTTA
CGTACAGCAGCAGCTTGGAGACAAAACATTAGCAAGTCATTCACCACATC
GGAAATTTCGAAAATATATTGAGGTTGCTTGGATATTTAGTACTGGTTTA
GGTGCCTTGTTATTTTTAATTGAAATTCCCATTTTAATGTGGGTGAAATT
TTACTATTTGAGTATTTATGCTGCATATGTTTCGATGGGAATTATGATAC
CAGTTTGTGTACTTTTTGTATTTTTTGCTTTTAAATTTTATCGGAAATTG
GTTGAACATAAACAAAGCAAAAATACGATGCAGTTGGAGGAGTTACAAGT
GATGGCAACTTATTTAAAAAATGATGAAGCTACTGCCATGTTTGATAGTC
CGAAAATTGGCGTCCCTTGA Coding sequence (CDS) from alignment at sc0000006_pilon:436090..439759- >XLOC_041094 ID=XLOC_041094|Name=XLOC_041094|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1386bp|location=Sequence derived from alignment at sc0000006_pilon:436090..439759- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAGCACCAAGCAAGTCTTGGAAGAGTCAATGAGACAAAATGCGGA
CAGAATAGACCAATCTGAAGTGTTATCTTGGAAATCACTTTTTCTGGCAA
AAGCAAAACTAAAAGCATCCAGTAGAACTTCAGGGTTAATGTCAGGGTTT
GCAATGATGTCAAGCACCAAGCAAGTCTTGGAAGAGTCAATGAGACAAAA
TGCGGACAGAATAGACCAATCTGAAGTGTTATCTTGGAAATCACTTTTTC
TGGCAAAAGCAAAACTAAAAGCATCCAGTAGAACTTCAGGGTTAATGTCA
GGGTTTGCAATGGTTGCTATGGTGGAGATTAACCTAGATACTGGAGTCCC
TCAAGGACTTGCCATCTTGTTTAGTTTTACAACTACCATTTTGATTTCAG
TACACGTGTTTGCACTAATGATCTCAACGTGTATTTTACCAAATATCGAA
ACAGTCGAATTGATGCATAATAGCGTTTACGTACAGCAGCAGCTTGGAGA
CAAAACATTAGCAAGTCATTCACCACATCGGAAATTTCGAAAATATATTG
AGGTTGCTTGGATATTTAGTACTGGTTTAGGTGCCTTGTTATTTTTAATT
GAAATTCCCATTTTAATGTGGGTGAAATTTTACTATTTGAGTATTTATGC
TGCATATGTTTCGATGGGAATTATGATACCAGTTTGTGTACTTTTTGTAT
TTTTTGCTTTTAAATTTTATCGGAAATTGGTTGAACATAAACAAAGCAAA
AATACGATGCAGTTGGAGGAGTTACAAGTGATGGCAACTTATTTAAAAAA
TGATGAAGCTACTGCCATGTTTGATAGTCCGAAAATTGGCGTCCCTTGAG
TTGCTATGGTGGAGATTAACCTAGATACTGGAGTCCCTCAAGGACTTGCC
ATCTTGTTTAGTTTTACAACTACCATTTTGATTTCAGTACACGTGTTTGC
ACTAATGATCTCAACGTGTATTTTACCAAATATCGAAACAGTCGAATTGA
TGCATAATAGCGTTTACGTACAGCAGCAGCTTGGAGACAAAACATTAGCA
AGTCATTCACCACATCGGAAATTTCGAAAATATATTGAGGTTGCTTGGAT
ATTTAGTACTGGTTTAGGTGCCTTGTTATTTTTAATTGAAATTCCCATTT
TAATGTGGGTGAAATTTTACTATTTGAGTATTTATGCTGCATATGTTTCG
ATGGGAATTATGATACCAGTTTGTGTACTTTTTGTATTTTTTGCTTTTAA
ATTTTATCGGAAATTGGTTGAACATAAACAAAGCAAAAATACGATGCAGT
TGGAGGAGTTACAAGTGATGGCAACTTATTTAAAAAATGATGAAGCTACT
GCCATGTTTGATAGTCCGAAAATTGGCGTCCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:436090..439759 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 157-693:538 |
| Aaloc | 1-156:3671 |
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