|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:681835..685119+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041092 ID=XLOC_041092|Name=XLOC_041092|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3285bp|location=Sequence derived from alignment at sc0000023_pilon:681835..685119+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGGACATTTCTTAAAcgaggaaaatgaagaaaaagctGCAAAGat
tttattatcaaaagaaTATGATGGAAGTAACAAGTCTGGAAAAGTaagcc
atttttttaaaatttaaattcaaactgCTACTACTAAGAACTCCTGATTT
GGAGATTGCACTACCTTTGTCAATCGACCAGGATATTAGAAAAGATATTA
GTTAGAAAATGGGCTTAAAGATTGACTTCTTTAAGAAGTTTTTGgctaaa
atgtttgaaaatatgACCCTGAATAAAATCCTAAATTTCCGTTAGATTTT
CTAACCCTCTAAGACTTTACCGAAAAGGGTACCCAGCGAAGAACTGGTTT
TACCTTTTTGGTTTTGTGAGTCCTCCTTGGATGTttactatgctatagtc
taagacaaatcactatctaagaaataagcccaaagccgaagaaaattcgc
aaaggggatatttttgccaaaaagagtttacagtcgatAGAGTTTGCAAG
TTTCTCTCCCACCGATTTTTTCTCCATATACCGCCATAACgtcataccgc
catattttcctgCCTTTACTACACTGTAACAGAAGATAACATTGTCTACT
TTGTCTACTTTGGATGACACATTTCCACCTCTTTCATTACCTACAGACTT
GAACCCAATCCCCTTAGTTTGTTCTTTAAGATTCCGATATCGCCCAAGAA
ATTATTGTACCTAAATacgcccagctggcacacaacgttgtttcaacgtt
aatataacgttatatggacgttgtgaacgttagataagcgttgaaacaac
gttgtgtgcctgctgggcgtccatcagtaaaatcaaaagtggTGCAAAAg
actctgggtacgagattgttattgggcttttccagaaaaaaaccgtatac
cccctgttgaggaggtctatCATTTTGTAGCTGGAAATGAcgtaaccccc
tggaatttcCAGGCAATTCCAGgattaaacccctctggaattctgaattt
cagtaggatttaaaaggctacccccatggaattccagttatttttgacag
atatggaaatggacctcctcaacaggggtatacggtttttttctggaaaa
gcccattgcctGGCTACCCAAACTGGAAATCACCACCATCAACAATACAG
TACTTGCAGTAGTGAAACGTTTTCTCTATATCTAttttttttCGTTACAG
TGTACGAAGTATTGCAGTAAATTACCATATCTTCTTTTGTATACTTTCAT
CTTTCTATTGGGATTTATCGCTGGTCTGACTCTTCCATTAACACAACATT
TACAAACAAGTTTGATAGGTGAGTATCTCAATAATGTATTGTACAGTAGA
GCCTCTACATTGCCTCTTACGGCTAACAACCCCAAAAGTTCGTTCAttaa
tcaaatgaaaaaaattccgctgaaattgtaaatttccaaataattcgaga
gagagagagGAATCGAGCTGACCAACTAAAAAAGCTCCACAAAAACTGTT
TTGTGAATTACAAGCCAAATTTGTTTGTACTGCCTATTCCTGTTATTTTA
AGCAAATAGCTGGCGGAAAGTAGGCTGTTAAatgttaaaatgttaaaaag
atataTAAAGTTTTGCAGTTACTTTAGACACCCAACTTTTTACCCACTTT
CATAAAAGGTAAACACAATGAATGCTAGtttttttcattgtctttttttt
tcagataaaaagaTTCAAAAGTTAGAGTTGATCGTTGAAAGATTCGAATC
GAAAGGTAATTTTGCTATAATTCCACCGAAGTacctatttttttctattt
tataatTTCTCGTGTGTTTCTTTCCTGAATCTTTAGTTTTACCTGCAAAA
GTACCCTACTGTAAattacactttcgttttcttgtgTTAGAAAATTTACA
GGTTTATAGGATTCCCGATACTGATTTACACTTCTGTAccacaaaaagaa
gaaatccTTACTCATTGAAATAAAGATCATCGATCCAGGGCTTTTACTAT
CCCAGCTGGCAAGGGGCTGGCACACTacgttctttcaacgtcaatttaat
gttcaaaacgtcctccatttaacgttagatgaacgttgaagcaACAGCTG
GGATAGATAAGACATAGGACAATCTGGGAGAAAACAATTTCAAACCAACA
AGTccatttatataaaaattttagaCTGTATATTCTTTTTTATCCGCCAT
AGTTTCCTCCATCAGTAACAACTCACTGACATTCAAGAATCAGATAATGG
ATGCTTTGACTGAGGCTATTTCAACCAGAAATAATCGGTCAATAAAGCAA
CAGTATTTAGCCCGATCTCAAGACAATCTATTAAAGAAATCTATCACAAA
AACTTTATCGACACAGCATGCTTCAACAACAAAAGCTGCAACCACTACAA
CAATGGCTTTCACACCAACTCCAAGCCAAGATAAAACTGGTAAACTTTAC
TAGTAACGCACACATGCATAGTATATTACTGTGCTACTTTTACGCGTAAT
ACATCGTAATTTCTTTTGTTACTTCTATTACAGTATATATGATTAAGGAT
GCTGCATTGGACTCCAAATCCCgggggggCAGTCAgacaaattgaccgac
gggtatgtgcggcggttaagggtatgtttttcaaaatatcagaaatgcac
tgtaaaggtggacttttgataaatgcactgtaagggtggaaatttcagca
aatctgggaaaaattgcaaatttctGCTCGAAAAtgtagattttttttgc
tctaaaagagtttaaaatttgaaaaaatgcactgtaagggtatgaatttc
accgatttttttctgcactgtaagggtgcgattttaaaagccattttttt
cgccgcacataccgtcagttggtaaacccactgccccccctgGGCTCCAA
ATACCCTGGTACCCAGAAGCCTTTTGGGGATATTGACTTTATTGTCACTT
ATTTCCTTGAGAATCTGGGTAGATGTTGGGTTATCATTCCAGCCACTTTA
TTCAATATCCAATGTCATACATCTGATCTATTTTCAGTCGCCGGCCCCGA
CAACGTGGACATCCATCTATCATGTCCTCTCTTCTACAACATCAACATCA
AATCAGTGTATTATCAAAACGTGCAAGCCAGTAGCGATTCTCTCAAACGT
CTTCAAAATGTATGCAATGATTCTACTCTTATTTCTGGCAATCGTACCAA
ATGTGCTGTCAGCTTGTTGAAAGCTTATGGTTCATCTTTTGGTGGAACTA
TGAAAGTGATGTATAATTGTATTCCAGGTCTTTGA Coding sequence (CDS) from alignment at sc0000023_pilon:681835..685119+ >XLOC_041092 ID=XLOC_041092|Name=XLOC_041092|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1494bp|location=Sequence derived from alignment at sc0000023_pilon:681835..685119+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGGACATTTCTTAAAcgaggaaaatgaagaaaaagctGCAAAGat
tttattatcaaaagaaTATGATGGAAGTAACAAGTCTGGAAAAATGGGTG
GACATTTCTTAAAcgaggaaaatgaagaaaaagctGCAAAGattttatta
tcaaaagaaTATGATGGAAGTAACAAGTCTGGAAAATGTACGAAGTATTG
CAGTAAATTACCATATCTTCTTTTGTATACTTTCATCTTTCTATTGGGAT
TTATCGCTGGTCTGACTCTTCCATTAACACAACATTTACAAACAAGTTTG
ATAGTGTACGAAGTATTGCAGTAAATTACCATATCTTCTTTTGTATACTT
TCATCTTTCTATTGGGATTTATCGCTGGTCTGACTCTTCCATTAACACAA
CATTTACAAACAAGTTTGATAGataaaaagaTTCAAAAGTTAGAGTTGAT
CGTTGAAAGATTCGAATCGAAAGataaaaagaTTCAAAAGTTAGAGTTGA
TCGTTGAAAGATTCGAATCGAAAGTTTCCTCCATCAGTAACAACTCACTG
ACATTCAAGAATCAGATAATGGATGCTTTGACTGAGGCTATTTCAACCAG
AAATAATCGGTCAATAAAGCAACAGTATTTAGCCCGATCTCAAGACAATC
TATTAAAGAAATCTATCACAAAAACTTTATCGACACAGCATGCTTCAACA
ACAAAAGCTGCAACCACTACAACAATGGCTTTCACACCAACTCCAAGCCA
AGATAAAACTGTTTCCTCCATCAGTAACAACTCACTGACATTCAAGAATC
AGATAATGGATGCTTTGACTGAGGCTATTTCAACCAGAAATAATCGGTCA
ATAAAGCAACAGTATTTAGCCCGATCTCAAGACAATCTATTAAAGAAATC
TATCACAAAAACTTTATCGACACAGCATGCTTCAACAACAAAAGCTGCAA
CCACTACAACAATGGCTTTCACACCAACTCCAAGCCAAGATAAAACTGTC
GCCGGCCCCGACAACGTGGACATCCATCTATCATGTCCTCTCTTCTACAA
CATCAACATCAAATCAGTGTATTATCAAAACGTGCAAGCCAGTAGCGATT
CTCTCAAACGTCTTCAAAATGTATGCAATGATTCTACTCTTATTTCTGGC
AATCGTACCAAATGTGCTGTCAGCTTGTTGAAAGCTTATGGTTCATCTTT
TGGTGGAACTATGAAAGTGATGTATAATTGTATTCCAGGTCTTTGATCGC
CGGCCCCGACAACGTGGACATCCATCTATCATGTCCTCTCTTCTACAACA
TCAACATCAAATCAGTGTATTATCAAAACGTGCAAGCCAGTAGCGATTCT
CTCAAACGTCTTCAAAATGTATGCAATGATTCTACTCTTATTTCTGGCAA
TCGTACCAAATGTGCTGTCAGCTTGTTGAAAGCTTATGGTTCATCTTTTG
GTGGAACTATGAAAGTGATGTATAATTGTATTCCAGGTCTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:681835..685119 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 502-747:3040 |
| Aaloc | 265-498:2205 |
| Aaloc | 214-261:1707 |
| Aaloc | 94-210:1201 |
| Aaloc | 1-93:1 |
|
