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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:574824..575971+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041086 ID=XLOC_041086|Name=XLOC_041086|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1148bp|location=Sequence derived from alignment at sc0000023_pilon:574824..575971+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTATACCCAATTCTCCTGGAGGGAAACCTTCAGCAGCCAATATAGC
TGCAGCAAATATTGCAATGGGAATTCCAAGTATGCAAGATGTTTGTTTAT
TGCCGGAAATCACCACACCAACTGTTAATGACAACAGACCATTTCAATGT
ACTATTTGTGGGAACAGATTTCGCCAACAGTGTCATTTGACACAGCATAT
TAGGATTCATACAAATGACAGACCATATCATTGCTCACACTGTGAGAAAG
CATTCAAGCAAAAGAGTCAGGTATATTTTAAAGCTACTTTGATTTCCATT
TCCCTGAAGCCACAATCTTTAAAATAGAGATGAAGAGCAATACTGTCTCG
TATTTTTAGTTATCAGTTATTTTAGATGTactgaaacttttttcttactA
GCTAAACCAACATGAAAGAATTCACACTGGTGAAAAGCCATATCAATGCC
ATCTATGTGCCAAAGCTTTTCCCCAAGCTGGTCAACTATACTCACACaaa
aaaaCTCATGGTATAAATCCAAGAGTGACAAAGGATCCACCTGAAGGAGA
TGACGTCCCAAGACGTGGAAGAAAACGTAAAAATAAGAATCCATCTCAGG
TTGTTTTAGCTCCACCACCTGTAGCTTATTTGATTGAATCATTACATCGT
CCAGGCTTGCCACCGCAATATGACCATCTGAGCTCAGTAGTACCTACAAA
GGAAAGGAAGATTCGTGAAAACTCTAAACACCAACTACAAGTAACTGATC
CTTTACCACCACCTGAAAAACCACAACGCTTAGAGGACCTAACTCAGGCC
CTTCTTCGTGATGATCCTTTATCAACTGTTCAAAACCGTCAAAGGTTGAT
TCCAGTCACAAGAGATCAGTATCAGCATTTCTTGCAGAACCAACAGCTGT
TCTATCATCATCCTGAACAGTATCAGCAACATTACTATCAAAGGCCTGAA
AGTTCTCGAGAAACTTTCACCACCATAACTACCAGCCTACCACCAGCTAC
AACTTTAACACAATCTGTTAAGAATTTCAAAGCAAGTGAGGCACcaggaa
aacaaccagaaacacaaACTGCTAATGTGAAAGTTGAAGAAATTCCTTCT
CATCTTAAAGATTTAGAACGTTTGATACCTTCATATGAACAAACTTAg Coding sequence (CDS) from alignment at sc0000023_pilon:574824..575971+ >XLOC_041086 ID=XLOC_041086|Name=XLOC_041086|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2034bp|location=Sequence derived from alignment at sc0000023_pilon:574824..575971+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTATACCCAATTCTCCTGGAGGGAAACCTTCAGCAGCCAATATAGC
TGCAGCAAATATTGCAATGGGAATTCCAAGTATGCAAGATGTTTGTTTAT
TGCCGGAAATCACCACACCAACTGTTAATGACAACAGACCATTTCAATGT
ACTATTTGTGGGAACAGATTTCGCCAACAGTGTCATTTGACACAGCATAT
TAGGATTCATACAAATGACAGACCATATCATTGCTCACACTGTGAGAAAG
CATTCAAGCAAAAGAGTCAGATGAGTATACCCAATTCTCCTGGAGGGAAA
CCTTCAGCAGCCAATATAGCTGCAGCAAATATTGCAATGGGAATTCCAAG
TATGCAAGATGTTTGTTTATTGCCGGAAATCACCACACCAACTGTTAATG
ACAACAGACCATTTCAATGTACTATTTGTGGGAACAGATTTCGCCAACAG
TGTCATTTGACACAGCATATTAGGATTCATACAAATGACAGACCATATCA
TTGCTCACACTGTGAGAAAGCATTCAAGCAAAAGAGTCAGCTAAACCAAC
ATGAAAGAATTCACACTGGTGAAAAGCCATATCAATGCCATCTATGTGCC
AAAGCTTTTCCCCAAGCTGGTCAACTATACTCACACaaaaaaaCTCATGG
TATAAATCCAAGAGTGACAAAGGATCCACCTGAAGGAGATGACGTCCCAA
GACGTGGAAGAAAACGTAAAAATAAGAATCCATCTCAGGTTGTTTTAGCT
CCACCACCTGTAGCTTATTTGATTGAATCATTACATCGTCCAGGCTTGCC
ACCGCAATATGACCATCTGAGCTCAGTAGTACCTACAAAGGAAAGGAAGA
TTCGTGAAAACTCTAAACACCAACTACAAGTAACTGATCCTTTACCACCA
CCTGAAAAACCACAACGCTTAGAGGACCTAACTCAGGCCCTTCTTCGTGA
TGATCCTTTATCAACTGTTCAAAACCGTCAAAGGTTGATTCCAGTCACAA
GAGATCAGTATCAGCATTTCTTGCAGAACCAACAGCTGTTCTATCATCAT
CCTGAACAGTATCAGCAACATTACTATCAAAGGCCTGAAAGTTCTCGAGA
AACTTTCACCACCATAACTACCAGCCTACCACCAGCTACAACTTTAACAC
AATCTGTTAAGAATTTCAAAGCAAGTGAGGCACcaggaaaacaaccagaa
acacaaACTGCTAATGTGAAAGTTGAAGAAATTCCTTCTCATCTTAAAGA
TTTAGAACGTTTGATACCTTCATATGAACAAACTTAgCTAAACCAACATG
AAAGAATTCACACTGGTGAAAAGCCATATCAATGCCATCTATGTGCCAAA
GCTTTTCCCCAAGCTGGTCAACTATACTCACACaaaaaaaCTCATGGTAT
AAATCCAAGAGTGACAAAGGATCCACCTGAAGGAGATGACGTCCCAAGAC
GTGGAAGAAAACGTAAAAATAAGAATCCATCTCAGGTTGTTTTAGCTCCA
CCACCTGTAGCTTATTTGATTGAATCATTACATCGTCCAGGCTTGCCACC
GCAATATGACCATCTGAGCTCAGTAGTACCTACAAAGGAAAGGAAGATTC
GTGAAAACTCTAAACACCAACTACAAGTAACTGATCCTTTACCACCACCT
GAAAAACCACAACGCTTAGAGGACCTAACTCAGGCCCTTCTTCGTGATGA
TCCTTTATCAACTGTTCAAAACCGTCAAAGGTTGATTCCAGTCACAAGAG
ATCAGTATCAGCATTTCTTGCAGAACCAACAGCTGTTCTATCATCATCCT
GAACAGTATCAGCAACATTACTATCAAAGGCCTGAAAGTTCTCGAGAAAC
TTTCACCACCATAACTACCAGCCTACCACCAGCTACAACTTTAACACAAT
CTGTTAAGAATTTCAAAGCAAGTGAGGCACcaggaaaacaaccagaaaca
caaACTGCTAATGTGAAAGTTGAAGAAATTCCTTCTCATCTTAAAGATTT
AGAACGTTTGATACCTTCATATGAACAAACTTAg
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:574824..575971 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 271-1017:402 |
| Aaloc | 1-270:1 |
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