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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:484564..487776+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041085 ID=XLOC_041085|Name=XLOC_041085|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3213bp|location=Sequence derived from alignment at sc0000023_pilon:484564..487776+ (Clytia hemisphaerica_ch_hm2_pilon)
GGATCATGTCGTGACCTCGTGTCAACAAAACGTTGTGAGCAGATGAAGAA
ACGTCGCTTCTGTGAAATCTATCCCAAAGAAATGAAGAAACGGTGTCGAA
GAACTTGCCAATTTTGTTGTAAGTCTACCTAACGTCTATCTAACGTCCAT
TTAAAATCCATCTAAAGTTGGTACTCTTTCTTACCATCACATGTGGAAAC
CATTCTTGAGGTCGAGCTTATGAGTGAGTTAGTCTTATTACGTATGTTTT
CCACGTAGTaaaaaaaGTGTGCACTTAAAGCTAAGACTTTTGGAGCattg
tgttttagagtctgaaTATTCTTTCGAAAAACATCTAAATAATAAAGAGA
GAATCTCTACAAATAATTAACCAGAGAGCGTTGTGATGATTGGGGAATGG
GTTTTACTCCTTACGAAGTAGGAATTCTTTCTTCTTCAAGTCTGAACGCT
TAGTGCTGTCCAGACACCActggttctgtgcacgcgaGACACAGATACCA
TGGTGCATAGTGATAAAACTCGAAACCAGAGAGAATCTTTACAAATAATT
AACCATATTTTCTTCTTCGTAGGTGCTGACTCATCGAGTGCTTCAGTTTG
TAAAACGTTATCCAAGTTTAGCCAACGTGTTCGGGAACGGACGTGTCACA
GTGAAAAGTTTTATTCAATCCTCAAAAAGAGCTGTCCGAAAACGTGCGAA
TACTGTGGAAGTAAGTTACTACGGAGTCTTTAAAGAGGCCTcccaagcgg
tttgcgtgatgacgtgatTGGGACCTTTTTGTAGCGTCAgcacgtgattt
ggaaattattATTCCTGATTGtgtgatcagaggtcaaaatgtgatcgtga
tttgaaaatttttgagccGGGATGAAAGGGATGCatgattttccatttct
tttgcTAGAGGGGGAGGGGCTCTTTAAAACTCGATCTCTACATATTACTT
GAGTGTCTCTTAATTCAAATGCAAGTTTGatgatcccttcagttaacaat
gccttgtaAACCAATCTCCATaaatcgaaatttccataattcaTACGAAT
TTAAGTTCATCATGCGTATTCTAGATACTACACAATATTAGCTATCTAAA
TGGCATATAACGGCATATTTTATGCTCTAATTTAATATAACAATATTTGT
CCATGCATTGCTGGCAAAAAAGGTTGCTCACGtattatatttctttattt
tgtctGTAGCAATGGGTTTATGCTTTTAATAAAACCAGGGATTACAATAA
TTGTAATCCCtggttttattaaaaaagaatacaaaatccaCTATTGTGTT
GTGTGAATGActtcatattttttaaatcaaatcttTTTCCCTCTTAACAG
AGGCACCATCAGAGCCACCTTGTGTGCGTTCAAAGTATGGCTGTTGCTGG
GAAGGAACGATCGCAAAAGATCACGTGGGAACAAGTCGAGATGGATGTCC
AGGTAAGTCTTCCACGCATGTGCATTCAATCGCCAGACACACATTATATT
TCCTGTTCATTAGCATTTTTTCAACCTGCAATGATGTTAGAAGATTATGA
AAGCATAATTTTTACGTAAGAGGCCTCTAAATATTGACTTTCAGAAGCAA
CATTCAACCTCCTAGAATATTTCCTTCTGTTATTAGGACTCGACCTGAAT
GATATAGACCCTCAACCCTTCTGAACTTTGTGATGCTTGATAATATCTTC
ATGTTTGAAAGCTCCAGGTTATAGGACACTCCTTTCTCACAGAcggaaaa
aattggccaaaatatcgtcccagtggaaattatactctaatttttgtccc
cactgaaaataatcacataagcaaatcctcactgaaaaatattatgctat
tttttccattcctactgaattttctttctcgaaaacaatgaaactcAAAT
TCTCATCCatgaaaaaacatgggaatataaaTCCAATCGGGTTTTGGTTC
GTTACTTATACCCCCACTAGCtcaaaaaatcccaccgggtctgtgagaag
ggggtgttatagAGAACTCACTAACTGTTATAGAGAATTGTGACATAAAC
CAATTAGTCAGGGGCTGAAGTTAAGATATTAGAGCAACATTCTATTGCTG
GAATTGATAGTTTGAACCCTTAAGATAATTTTAAGCCAGAGTGCCATTTT
TCTAAATCAGACACTAAATTAATCTCAATGTAACTTTCATTTCGATTGTT
AAAAATAAACTCTTTCTAATATATTTCAGAATGTAAAGATCGCTCTGGAA
AGGAATTCTGTTCTCAATTTCGTGTTCACTGTAATGACAAATTCTCAAAA
TCTGGAAGACAAATAAGACAACTTTGCCCTAGAACATGCAGACGCTGTGG
ACGTAAGATCAGTTGATTCATACTGTGATTTACTATTGTCTAGGAAAAAT
CACTTTCTCACAAATAGGCTCCAAGTCCTTGGTGGAGAAATTCGCAACTA
GGTTATATTTAGTTTCTCAGAAATCGACCGTGTGTGAAGATTGACTGTCA
AGAATTTTATCAAACGTCTCCTACTGTCGGGTACATAATAGCCccccact
aattaatttttcgaaaattttccacccaagacaTTCTTATACTAACCCCC
GCTTATtagtttttggaaaaatgtttttgaaaattctctcttttgtccta
attctgctgtatcagcctccttttcaaaaattttccacccaggacatttt
tattctagccccccccccccgcttattccaaaccccccggctattaggta
cccgagagtaatcactactttttttaaaatcaaaGACATAAAACAATATA
CTGTGATACACATGTTAGGTTTTGCTGACAATGATAATTGATGTTGCTAA
GAGGAAGGCGTTTCTTCCTAACTTTACAAAGAACGTTTTACTGAATATAT
TGGCTGtaaactttaaaatttctttcccGCTTTCTGATcatcttgctcca
cacccgtGTCAGCCCAATGTGAAAAatcttgtaaatcaaaattgatgagt
aagcaaacactatcacttttatttataaaaacaaaacatttaaactttca
tttttcGTTCACAGCTCACCAAATATGCAGAGACGAACCAACACTTTTAG
ATTCTTGTTTACAAATGAAGCATGATACAGACTCATTTGGTAGCAAACCG
TGTCTTGATAATTTCCACGTCATGAAGTTCAATTGCCCTAAAACATGCAA
AATCTGCAAAGTT Coding sequence (CDS) from alignment at sc0000023_pilon:484564..487776+ >XLOC_041085 ID=XLOC_041085|Name=XLOC_041085|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000023_pilon:484564..487776+ (Clytia hemisphaerica_ch_hm2_pilon)
GGATCATGTCGTGACCTCGTGTCAACAAAACGTTGTGAGCAGATGAAGAA
ACGTCGCTTCTGTGAAATCTATCCCAAAGAAATGAAGAAACGGTGTCGAA
GAACTTGCCAATTTTGTTGGATCATGTCGTGACCTCGTGTCAACAAAACG
TTGTGAGCAGATGAAGAAACGTCGCTTCTGTGAAATCTATCCCAAAGAAA
TGAAGAAACGGTGTCGAAGAACTTGCCAATTTTGTTGTGCTGACTCATCG
AGTGCTTCAGTTTGTAAAACGTTATCCAAGTTTAGCCAACGTGTTCGGGA
ACGGACGTGTCACAGTGAAAAGTTTTATTCAATCCTCAAAAAGAGCTGTC
CGAAAACGTGCGAATACTGTGGAAGTGCTGACTCATCGAGTGCTTCAGTT
TGTAAAACGTTATCCAAGTTTAGCCAACGTGTTCGGGAACGGACGTGTCA
CAGTGAAAAGTTTTATTCAATCCTCAAAAAGAGCTGTCCGAAAACGTGCG
AATACTGTGGAAAGGCACCATCAGAGCCACCTTGTGTGCGTTCAAAGTAT
GGCTGTTGCTGGGAAGGAACGATCGCAAAAGATCACGTGGGAACAAGTCG
AGATGGATGTCCAGAGGCACCATCAGAGCCACCTTGTGTGCGTTCAAAGT
ATGGCTGTTGCTGGGAAGGAACGATCGCAAAAGATCACGTGGGAACAAGT
CGAGATGGATGTCCAGAATGTAAAGATCGCTCTGGAAAGGAATTCTGTTC
TCAATTTCGTGTTCACTGTAATGACAAATTCTCAAAATCTGGAAGACAAA
TAAGACAACTTTGCCCTAGAACATGCAGACGCTGTGGACAATGTAAAGAT
CGCTCTGGAAAGGAATTCTGTTCTCAATTTCGTGTTCACTGTAATGACAA
ATTCTCAAAATCTGGAAGACAAATAAGACAACTTTGCCCTAGAACATGCA
GACGCTGTGGACCTCACCAAATATGCAGAGACGAACCAACACTTTTAGAT
TCTTGTTTACAAATGAAGCATGATACAGACTCATTTGGTAGCAAACCGTG
TCTTGATAATTTCCACGTCATGAAGTTCAATTGCCCTAAAACATGCAAAA
TCTGCAAAGTTCTCACCAAATATGCAGAGACGAACCAACACTTTTAGATT
CTTGTTTACAAATGAAGCATGATACAGACTCATTTGGTAGCAAACCGTGT
CTTGATAATTTCCACGTCATGAAGTTCAATTGCCCTAAAACATGCAAAAT
CTGCAAAGTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:484564..487776 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 487-633:3067 |
| Aaloc | 364-483:2232 |
| Aaloc | 262-360:1353 |
| Aaloc | 124-258:575 |
| Aaloc | 4-120:1 |
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