|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:434617..437486+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041083 ID=XLOC_041083|Name=XLOC_041083|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2870bp|location=Sequence derived from alignment at sc0000023_pilon:434617..437486+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTTCTTATATGGTTTCTGACCAATATAACTTTGGTGTATTCCCA
ATGGTTTTCTGGCGAAGAGAAATTACAAGCCACAACAAACACTGATAAAG
AGGAtgtttcaaaaccttttcaggCAACTTCGCCTAttcaatgcattttg
aaatgtcaaagAAGGTCGAGGGAAGGTTATTTTGTCGAAAATAAAGAGCA
atgtttttgcttgaaaagtgAAGATCAGAAAATATTATCGGATGAGAAAG
TCAATGGAATATTTTACAAGCCCGTCACTGTGAGTAATGCAattttcgtt
attttatttatttatattttatccCATTCCAGACTTCAAGACTTCacaaa
gttataattttctatatttttgcaaaaagagtTTCCAGTTGTCGATACAC
TATTAGCAAAATAAAAGGTCAGGTGCCCAAGATTGATAATCCGCTTTTTA
CGGTCTTTGTACAAGATAATAATTTCATATCTCACTCTTGTAATCGAAGG
ATATACCAACGCCAAAAAATGTTCACCTACAgtaaaagtcataatatttg
agaaaaaaggggaattctcacgaaatcttatagccacaaacgatttggaa
gcggtATAACTTAgattggaagggtagagttttaatattagacttaagac
taggctctcaggatccaaaagttcaagaataaAGAATgatccaatagggc
tcagaatatactCTGGAAGTCTATTAACCCCTCTCGAATTGAACTAATCG
ATTAGATtcatcaattagcccaaaagtgactttctcgcccgaactttaaa
ttgctaaaaacgttATCTGATATATGGCAggttggcggccgcccacgcta
aagatCTAAAGGGAGTGGGTTAATTTCCCATTGGAGAGGAATAATAGTCC
TTCGATGTGCCGCATCCTAAGTCGGGTTCAACATTCCTTGCCCGCAAACC
tagaaatatttcggttggacccgccaatccccgaaaacgagggctgggtt
accagaacTCCtgctgcaaaatttttgacgtgaTCTCGcaaaaattccgt
aatgtaaaccttccagatgttgaaaattttcccgaccttcagagctttag
cgtatcggatgaaaatttcaccatctgggtgccagataactaAAAACgaa
gaattaaccaaaattttcaatataatttGACCAAGATTGTATACCGCTTA
AATCTTAACCCTTAGACGGCAAAAGGCGTATATATACGtcttgaaaaggt
cattttaccgatacacagtcttttggtcataactcctgaccacttgagat
tcagagaaaaagaattcgctattttttgtagctgagagaaaaaGCTTTCC
agcgataccaaagttgatacctaaATCATTTGTCCTGGTCAAGAAATggc
tttgaaagaataaatttccagaaaaaaatgatgaactttttggccttttt
caaaaaagttttgaaaggttAAGTTAGGTTAAGTTCCAAGGTTCCAAGGT
TtcgccattaaaaaaaaaatgtgttgtATTGTCTAACTAACTAACTTTCA
TTTCTAGGTGGAAAAACCGATTGACTCGTGCAAAGCTGAAAGAAAAAGAT
GCCTTGATTGTCAATCTGATTTTTATGAACTTGATATCGgggaagatgaa
aagaaaaatgtcttctgcaatttcgaaaaagatgAGGGGAATGGAGGTGT
TGGTGATGGGTCGTGCATGGCTATCAAGGAACATTGTATAGGCTGTTCAT
CGGgattatattattttgaaattctcGGTATAGCAACAGAAGTTTTTTGT
GAGATGACAGAGGATGGAGGtatgtttattaaattttcaagTTGATTTGC
AAAGAGAATTTACAGTAAGATTTAAGTAATTCCAGGGTTTCACTCATTCT
TTGGCTAGGACTAATAAGTATATAATCGCCCGCCTTTGCTAGCCAGGACC
GATTAACTATTTGCGACGTAAAGAGGCCAGTGTGCTAAATTTGGAGCTTT
CGTTGATTTCCACGTCAACGTCCTtctatcagaatcatcaatagctaAAG
GGGGACAGAAAAACCTACTTAGGTTCGAAGatggaaaatctcaaaaacac
gCTTTTTTAAACTAATAGGCGGGTGGATGGCTATTGTGAACATCACCTTC
GACGACAATAGCCTGCTGGCCAACGCAATTGCAGTTCTTGAGAAACCATC
ATTACTCAACCAGCTCAATAACATTCAAAGCGGTCGCTTTTTATTAGCAT
CCGATGAATTGAAAAAGCTATTCACCAATGGAGGTTACACAGAGCTACGA
GTTAAATGCTTTAAAGTATGTGTTGCTTTTCTTACTTGATTTCTTGTTTA
GTCTTTCgcaattctattttttttaccAGTGAACAGGATCCTACTAGATA
AGTTTGTAAATTGACAAGTTTTCGCACAAAACTCTGGTTACTTGTTTCTC
GTGTATGTTTTGAAGTAAGCATAATATTCCATCGATATTTTGTCTAAATT
TCGCTTTATCTATATCCAGCCATACCATGGTCGCACACTCCATGCAGCCA
TAACAGGAACTAAATCGTTGACATATCTAAGAGGAAAAGGAGTGGTTCGA
GGTGACGGTGGTCATTGTCAAGGTAGTCATTGTGGTCTATGTGGTGAAGT
ACGATTCCTGGCTGATGACACCTCAATCATGGGTCAACGAAACTGCTCAC
AATTAGGCATGGGAATGGAGATAACAACAAGTCTTTATGACCACGCTTTC
TTTGTATGGGGTGAGCGACATTGGTCGTTTTTGAACAAACATGAAGATGG
TTTTGTGCGATTTGAATGCGACGATTTTAGCGCTGATTTTAATGGTGAAT
GGATGGTCTATGTCCGTTAG Coding sequence (CDS) from alignment at sc0000023_pilon:434617..437486+ >XLOC_041083 ID=XLOC_041083|Name=XLOC_041083|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2178bp|location=Sequence derived from alignment at sc0000023_pilon:434617..437486+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTTCTTATATGGTTTCTGACCAATATAACTTTGGTGTATTCCCA
ATGGTTTTCTGGCGAAGAGAAATTACAAGCCACAACAAACACTGATAAAG
AGGAtgtttcaaaaccttttcaggCAACTTCGCCTAttcaatgcattttg
aaatgtcaaagAAGGTCGAGGGAAGGTTATTTTGTCGAAAATAAAGAGCA
atgtttttgcttgaaaagtgAAGATCAGAAAATATTATCGGATGAGAAAG
TCAATGGAATATTTTACAAGCCCGTCACTATGGAGTTTCTTATATGGTTT
CTGACCAATATAACTTTGGTGTATTCCCAATGGTTTTCTGGCGAAGAGAA
ATTACAAGCCACAACAAACACTGATAAAGAGGAtgtttcaaaaccttttc
aggCAACTTCGCCTAttcaatgcattttgaaatgtcaaagAAGGTCGAGG
GAAGGTTATTTTGTCGAAAATAAAGAGCAatgtttttgcttgaaaagtgA
AGATCAGAAAATATTATCGGATGAGAAAGTCAATGGAATATTTTACAAGC
CCGTCACTGTGGAAAAACCGATTGACTCGTGCAAAGCTGAAAGAAAAAGA
TGCCTTGATTGTCAATCTGATTTTTATGAACTTGATATCGgggaagatga
aaagaaaaatgtcttctgcaatttcgaaaaagatgAGGGGAATGGAGGTG
TTGGTGATGGGTCGTGCATGGCTATCAAGGAACATTGTATAGGCTGTTCA
TCGGgattatattattttgaaattctcGGTATAGCAACAGAAGTTTTTTG
TGAGATGACAGAGGATGGAGGTGGAAAAACCGATTGACTCGTGCAAAGCT
GAAAGAAAAAGATGCCTTGATTGTCAATCTGATTTTTATGAACTTGATAT
CGgggaagatgaaaagaaaaatgtcttctgcaatttcgaaaaagatgAGG
GGAATGGAGGTGTTGGTGATGGGTCGTGCATGGCTATCAAGGAACATTGT
ATAGGCTGTTCATCGGgattatattattttgaaattctcGGTATAGCAAC
AGAAGTTTTTTGTGAGATGACAGAGGATGGAGGCGGGTGGATGGCTATTG
TGAACATCACCTTCGACGACAATAGCCTGCTGGCCAACGCAATTGCAGTT
CTTGAGAAACCATCATTACTCAACCAGCTCAATAACATTCAAAGCGGTCG
CTTTTTATTAGCATCCGATGAATTGAAAAAGCTATTCACCAATGGAGGTT
ACACAGAGCTACGAGTTAAATGCTTTAAAGCGGGTGGATGGCTATTGTGA
ACATCACCTTCGACGACAATAGCCTGCTGGCCAACGCAATTGCAGTTCTT
GAGAAACCATCATTACTCAACCAGCTCAATAACATTCAAAGCGGTCGCTT
TTTATTAGCATCCGATGAATTGAAAAAGCTATTCACCAATGGAGGTTACA
CAGAGCTACGAGTTAAATGCTTTAAACCATACCATGGTCGCACACTCCAT
GCAGCCATAACAGGAACTAAATCGTTGACATATCTAAGAGGAAAAGGAGT
GGTTCGAGGTGACGGTGGTCATTGTCAAGGTAGTCATTGTGGTCTATGTG
GTGAAGTACGATTCCTGGCTGATGACACCTCAATCATGGGTCAACGAAAC
TGCTCACAATTAGGCATGGGAATGGAGATAACAACAAGTCTTTATGACCA
CGCTTTCTTTGTATGGGGTGAGCGACATTGGTCGTTTTTGAACAAACATG
AAGATGGTTTTGTGCGATTTGAATGCGACGATTTTAGCGCTGATTTTAAT
GGTGAATGGATGGTCTATGTCCGTTAGCCATACCATGGTCGCACACTCCA
TGCAGCCATAACAGGAACTAAATCGTTGACATATCTAAGAGGAAAAGGAG
TGGTTCGAGGTGACGGTGGTCATTGTCAAGGTAGTCATTGTGGTCTATGT
GGTGAAGTACGATTCCTGGCTGATGACACCTCAATCATGGGTCAACGAAA
CTGCTCACAATTAGGCATGGGAATGGAGATAACAACAAGTCTTTATGACC
ACGCTTTCTTTGTATGGGGTGAGCGACATTGGTCGTTTTTGAACAAACAT
GAAGATGGTTTTGTGCGATTTGAATGCGACGATTTTAGCGCTGATTTTAA
TGGTGAATGGATGGTCTATGTCCGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:434617..437486 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 739-1089:2520 |
| Aaloc | 544-738:2121 |
| Aaloc | 280-540:1558 |
| Aaloc | 1-279:1 |
|
