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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:374279..376794+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041081 ID=XLOC_041081|Name=XLOC_041081|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2516bp|location=Sequence derived from alignment at sc0000023_pilon:374279..376794+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATCCTGTTGGAAGGTGTGTAACGAGATGAGTACGGAGATTGAAGATGA
AAACATTTACGAAAATGTAAGTCAAACCTTAGATATTATACAGAGAAAAT
AAGAGCATGCTAGACTAAAGGTATGTTGTAACTTACCTTAGACTGAGAGG
ATTAACAATCTTGGTCTTTTTTAAACAATGTTAAACTTTTATAGCTAACC
TAACCCAGACCAACTAGATTCAACCAGAGTCTCCAAACACGGGACCCGCA
GTATGAGCTTTTTGTGAGGGCGTACGGGGGTTTGCGATTTCAGAAATAct
gaataattttgccaaaatttccaaaattccgtaaaaaatacttgcaaaga
tacaaatttttttgagtatttttcttcgttttgagtaatttttcatcaaa
tttgatttttcatgtatgaatttcgaaaaaaaagagataaaaactTCATC
ATActgaaatttcaaagcaaaaattcatggatttccgataccgaaacaat
ttcagaattccgaaataccacAGGAATTTTGCCCGAACTCCataatttca
aataataaagggtCGATTTCTGCAATTCTGAAATACGGTACGTCCCCAGG
TCTCCCACCACCTTTTAAGGCCACTTGCTGATTTTGAACTTGTTTGAAGT
GTGTTCAGGCCAGGATTTCAGATGCAAAACATTCCAAAATTTTGTGACCT
AAACTTGTCTGAAACATCAATGTCCAGGCCAAGAGAAAAAGATTTCTGCA
TAATGCATGATGGTGGAGGAAAAGCAAAATGCTCTTGTGGAAAAATTGCG
TTTTTTAAAAGCTAGTTAGTAGTTTTCACTCTCATTTTACAGGTTGTCCC
AAATTCAGAATTTGTAATCGTCAATGGATGCACCTTTCGAAAGGTTAACA
GGGacatcaaatatattttatcttttacaCTGAAGAAAGTGGGAATCCTT
ACCATACCTGGTAAACCCGTGGAAACTGTATACCACTTAAAAAGTCATGA
TCCCTTGAATGATGGAACAATGTTGTGCAGGTaatcgaatttttattttc
ccatttgattctccttgtttgttttgcaAATGTTTTTGATTGCATCTTCT
CAAAGCCGTTATACTTTTCAATCCAATCAATTTCATTGCATATTCATCTC
AAATTTGTTTTTGGCACTAAAACCATTCCTAACGTTATTTTATTCATCAA
GAGTTGGCCATTTTAGCTGATCTCAAAATTAAATGGTTTTTGTGAAAAGC
GACTCACAAAAATTAACTGACAGAAATACACTCTGGTTTGGCAGTCTAAT
TAGTGTATCAAACCTGGGCTGGACTTGGAAAATGTTAGTTTGCTGGCAGC
CTACCTACTCTGCCAACCTAAAAACtgaatcgcaaaatttaatacgCGCG
AAAATTTCCTGAAACTGGCAATCGCAAAATTTCACGggaaatataatacc
aataaggtacctccaaaatctagggtcagtTGATGGCAACCAAGAATTTG
TCCTGACCTGTTTATTCTTCTTGTGGtaactaattaatttttagcAATTA
ATGAACAACCTATAGAAGGAGTATTTTGGAAGAATTAATCAGACTTTCac
atttggaaactttttcgaGAGTAACTAAAGGCTGaaaagtcagcaaaatt
tgcaaaacttatataaaaatgtcaaaatcttTGTATTGGGATGTCAACAA
GACTACCTGAACTTTTAACCTTACAAGCtgctcatttaaaaaaaaagttt
tttctaccttaagggaagaaacttTTGTGACAACAACAATATTCTCAGGA
TTAAAAAGATATAacattggtctttttagggaaaaataggccattttgta
aacaaaaaactcaACTACCAAATTAAATTCATTGAAACTTTCGAATTCCG
AGCAGTGAACCGCAAAATAAAattatgtgaaaataaaattctgTGGAAAT
AGCTGCCTTTATATGATATACAATATTTTGATCAACCTCATTACAGGGAA
CATGAGAACAATCCTATTGAAAGTATTTGTACTGCAGATGTCTGATTTTG
TAATCTGTGTTATATTTTTCAGACTTGCAAGATTAGTTTCACGAGACTTC
GATTCGAGGAAAGCGTTTTACGATTCAATAACAACATTCGGAAAAGGGAT
GAAAATCCACGTGGACACCATTGTAAATGCTCAGATATTGAGCGATTTCT
ATCGGCATTTGGAAACCCACGGCGACGAGGAGTTAAAAATCTATAGAATG
GCTGATATAATCGGAGTCATAGAGGACACCTTAGTCCTTTCAAATGATGT
AAGTAATTATTATAATTATTCCCTCTTGTTTTTGTTGTAAATATTTCCTC
TCTTGTTTATATATTTCTGACACAAATCAATTTGAGAAATCTTTAAACAA
AGCCCACTTTAGTCGTGATTGAAAACCTGAAGTCTGAATTTATAATGACA
GATTTTACTCAATACTACCTCTTTTAGATGCAAATAAGAGGTGGGAGATT
GGTACCTCAGATGGAC Coding sequence (CDS) from alignment at sc0000023_pilon:374279..376794+ >XLOC_041081 ID=XLOC_041081|Name=XLOC_041081|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000023_pilon:374279..376794+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATCCTGTTGGAAGGTGTGTAACGAGATGAGTACGGAGATTGAAGATGA
AAACATTTACGAAAATAAATCCTGTTGGAAGGTGTGTAACGAGATGAGTA
CGGAGATTGAAGATGAAAACATTTACGAAAATGTTGTCCCAAATTCAGAA
TTTGTAATCGTCAATGGATGCACCTTTCGAAAGGTTAACAGGGacatcaa
atatattttatcttttacaCTGAAGAAAGTGGGAATCCTTACCATACCTG
GTAAACCCGTGGAAACTGTATACCACTTAAAAAGTCATGATCCCTTGAAT
GATGGAACAATGTTGTGCAGGTTGTCCCAAATTCAGAATTTGTAATCGTC
AATGGATGCACCTTTCGAAAGGTTAACAGGGacatcaaatatattttatc
ttttacaCTGAAGAAAGTGGGAATCCTTACCATACCTGGTAAACCCGTGG
AAACTGTATACCACTTAAAAAGTCATGATCCCTTGAATGATGGAACAATG
TTGTGCAGACTTGCAAGATTAGTTTCACGAGACTTCGATTCGAGGAAAGC
GTTTTACGATTCAATAACAACATTCGGAAAAGGGATGAAAATCCACGTGG
ACACCATTGTAAATGCTCAGATATTGAGCGATTTCTATCGGCATTTGGAA
ACCCACGGCGACGAGGAGTTAAAAATCTATAGAATGGCTGATATAATCGG
AGTCATAGAGGACACCTTAGTCCTTTCAAATGATACTTGCAAGATTAGTT
TCACGAGACTTCGATTCGAGGAAAGCGTTTTACGATTCAATAACAACATT
CGGAAAAGGGATGAAAATCCACGTGGACACCATTGTAAATGCTCAGATAT
TGAGCGATTTCTATCGGCATTTGGAAACCCACGGCGACGAGGAGTTAAAA
ATCTATAGAATGGCTGATATAATCGGAGTCATAGAGGACACCTTAGTCCT
TTCAAATGATATGCAAATAAGAGGTGGGAGATTGGTACCTCAGATGGACA
TGCAAATAAGAGGTGGGAGATTGGTACCTCAGATGGAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:374279..376794 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 481-519:2478 |
| Aaloc | 256-480:2074 |
| Aaloc | 67-252:843 |
| Aaloc | 1-66:1 |
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