|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:368813..370535+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041080 ID=XLOC_041080|Name=XLOC_041080|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1723bp|location=Sequence derived from alignment at sc0000023_pilon:368813..370535+ (Clytia hemisphaerica_ch_hm2_pilon)
GGACTAGTGGATGCAGCTAGTGATGAAATGTTCGACCAACTATTGATTCC
CCTGGTTGAGACTTGGAACGAACGAGAAACAAAAATTAGGAAACTAAAAT
GTGGCAAAGACGCCAAGTTTGCTGATTACTTTATCAAAAACATTAGTTTG
GATATCTTGCTCATGCAAAACGAAGATAACTTCTTCTATAACAATGCTAG
TGAAAGCATTAATGACCGCATCAAAGAAATCGTTCACCAAAGCAATGCAA
ATAAGACGGCTTCCGGTCAACCAAAGCAGAATTGTACTTGGGTACAATTT
GTCAGTCTGTATAAAGTAAGTTCAATGTATTTGAACCTCGATTTGTATTA
CTCAAATTTGTAATTAATCAAgtacatttttaaaaaagctgagtttattt
taaaatgatttttatctCCAAGTAAATCCTGATGGCTTCGCGTTTGGCAC
ATAATCACTGTAATGGTCATTGCTTCGTAAATAGAATAATCAgtcttttt
catccagatttccAAAAAGATTAGATTAGACTTAGATTTGATCGTTTTGA
CTAAACAACCATGTCAGATTGTCACACTCGGTCGGAACATTCCGTCAACA
GAGCGTGATGTGCGTAAAATAGATGATTTGTTGTGAAATTATTCAATTAT
AAGAATTCcttgtttttttggacccacccccgtagaggtcctataaatta
gcTCATGTTCGTGCGTTCTTACGTGCGTTTGCTACCAGcttgagattggc
tcattcaaaatttctgattttcggCACAAAGGTGAATGCATGACTAAAAA
CCCTCAAATGTTACTgagtccgattttcaaaaaacaaatttttaggcaaa
tgtaggccaaaaaacggcaaaaattaTTGAAGAGTTTTTTGGACTAATTG
GATCATTAgttatttttctgaattttttgcacgaaagtagggtttCATTG
ATAGCTCAAGCAGCAGATTTTTGAAGTTtcggtttctaaacgttttttta
taagaaacaaacaacgaattttaatagatcgtcactatgtgttaaatgtg
cataaccaggtaggccCATAAAAGCATCGCTTGTTATTTTTAGGGTTATG
TCGACTGTGTGCAAAGGAATATTCACCGAAGCATCATTGGAGACAGTGCC
ACCTACCTTCTCTCAAATGAGGTCTTGCAGTTCGGTTTGGCCCCACACAC
TTTTCGTATGTTAAGTAGAGAGCAGCAAAATCAGAGAATCAACATACTCG
ACTCAACCCACAAAATCAAAGGACCTGCAACGCCCGCCTTGAATGAAGCT
TCTGGTGCATTCTCATCGAATACTGTATCGCCAAGTCCAGAAGTAATTAC
AATTGATTCCGATGAGGAATCTCTTGATTTCCCACCATTCGCTACAACAG
ACTTGCCGTCCTTTTTGGCACCAACATGGAAAAAGCCAGCTGATATTTTG
AAGGTGAAAGATGGTATTGTGCCATCCCCTGGacaaaaggaaacaaaaat
tgtAATCTCCTTTTCGGACAAGTCGGACCCACGCTTCGTCTCTCACAAAA
ATGCAAATTCCCAATGTCAATGTCCTGGGTTTAAAAAGGAAGGAGTTTGT
GCGCATACAATTTCTGTTGGACACCATGTTGGAAAATTGCCTCTCCTACT
GAAGTCCTTTTTTAATCTTACAAAGGCTGCACAACCACTTCTGCATaaaa
aaaGCTGGCAGAAAGCCGAATGA Coding sequence (CDS) from alignment at sc0000023_pilon:368813..370535+ >XLOC_041080 ID=XLOC_041080|Name=XLOC_041080|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000023_pilon:368813..370535+ (Clytia hemisphaerica_ch_hm2_pilon)
GGACTAGTGGATGCAGCTAGTGATGAAATGTTCGACCAACTATTGATTCC
CCTGGTTGAGACTTGGAACGAACGAGAAACAAAAATTAGGAAACTAAAAT
GTGGCAAAGACGCCAAGTTTGCTGATTACTTTATCAAAAACATTAGTTTG
GATATCTTGCTCATGCAAAACGAAGATAACTTCTTCTATAACAATGCTAG
TGAAAGCATTAATGACCGCATCAAAGAAATCGTTCACCAAAGCAATGCAA
ATAAGACGGCTTCCGGTCAACCAAAGCAGAATTGTACTTGGGTACAATTT
GTCAGTCTGTATAAAGGACTAGTGGATGCAGCTAGTGATGAAATGTTCGA
CCAACTATTGATTCCCCTGGTTGAGACTTGGAACGAACGAGAAACAAAAA
TTAGGAAACTAAAATGTGGCAAAGACGCCAAGTTTGCTGATTACTTTATC
AAAAACATTAGTTTGGATATCTTGCTCATGCAAAACGAAGATAACTTCTT
CTATAACAATGCTAGTGAAAGCATTAATGACCGCATCAAAGAAATCGTTC
ACCAAAGCAATGCAAATAAGACGGCTTCCGGTCAACCAAAGCAGAATTGT
ACTTGGGTACAATTTGTCAGTCTGTATAAAGGTTATGTCGACTGTGTGCA
AAGGAATATTCACCGAAGCATCATTGGAGACAGTGCCACCTACCTTCTCT
CAAATGAGGTCTTGCAGTTCGGTTTGGCCCCACACACTTTTCGTATGTTA
AGTAGAGAGCAGCAAAATCAGAGAATCAACATACTCGACTCAACCCACAA
AATCAAAGGACCTGCAACGCCCGCCTTGAATGAAGCTTCTGGTGCATTCT
CATCGAATACTGTATCGCCAAGTCCAGAAGTAATTACAATTGATTCCGAT
GAGGAATCTCTTGATTTCCCACCATTCGCTACAACAGACTTGCCGTCCTT
TTTGGCACCAACATGGAAAAAGCCAGCTGATATTTTGAAGGTGAAAGATG
GTATTGTGCCATCCCCTGGacaaaaggaaacaaaaattgtAATCTCCTTT
TCGGACAAGTCGGACCCACGCTTCGTCTCTCACAAAAATGCAAATTCCCA
ATGTCAATGTCCTGGGTTTAAAAAGGAAGGAGTTTGTGCGCATACAATTT
CTGTTGGACACCATGTTGGAAAATTGCCTCTCCTACTGAAGTCCTTTTTT
AATCTTACAAAGGCTGCACAACCACTTCTGCATaaaaaaaGCTGGCAGAA
AGCCGAATGAGGTTATGTCGACTGTGTGCAAAGGAATATTCACCGAAGCA
TCATTGGAGACAGTGCCACCTACCTTCTCTCAAATGAGGTCTTGCAGTTC
GGTTTGGCCCCACACACTTTTCGTATGTTAAGTAGAGAGCAGCAAAATCA
GAGAATCAACATACTCGACTCAACCCACAAAATCAAAGGACCTGCAACGC
CCGCCTTGAATGAAGCTTCTGGTGCATTCTCATCGAATACTGTATCGCCA
AGTCCAGAAGTAATTACAATTGATTCCGATGAGGAATCTCTTGATTTCCC
ACCATTCGCTACAACAGACTTGCCGTCCTTTTTGGCACCAACATGGAAAA
AGCCAGCTGATATTTTGAAGGTGAAAGATGGTATTGTGCCATCCCCTGGa
caaaaggaaacaaaaattgtAATCTCCTTTTCGGACAAGTCGGACCCACG
CTTCGTCTCTCACAAAAATGCAAATTCCCAATGTCAATGTCCTGGGTTTA
AAAAGGAAGGAGTTTGTGCGCATACAATTTCTGTTGGACACCATGTTGGA
AAATTGCCTCTCCTACTGAAGTCCTTTTTTAATCTTACAAAGGCTGCACA
ACCACTTCTGCATaaaaaaaGCTGGCAGAAAGCCGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:368813..370535 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 316-945:1094 |
| Aaloc | 1-315:1 |
|
