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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000032_pilon:1530101..1535002+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041059 ID=XLOC_041059|Name=XLOC_041059|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4902bp|location=Sequence derived from alignment at sc0000032_pilon:1530101..1535002+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGAAACGTTTCGAGGGTTATAAATACGAGAAACTCTCAATAGCAAC
AGAAGAACAAAATGGAGTTATAGATAAACAACCTAATGGTCAGAATCATA
CAGGTTTAAACTTTAGTCTCGAATCAGTTGATGAACTATTAcacgaaaac
aaagaaaatagcAAAGGGTTGTGGAgcaatctttttgattttttaacttG
TGGTGCGTGCTGTAGAGTGGAGGTTTACTACCCTCGATATGAACATTTTC
AGGTAAAAACACTTCAAACTTCTTTATATCAGAACTGACAAAGCTCAGCT
GTAACCTCAGTTAGGGAAAAGTTCTCCAAAGGCTTTATACCACCgatatt
ttgtattttgccCTTTCTTACTGAAATAAATAAACTCAATCTCAGACTGA
GACTTGCGAAGTCTTGAACTTTTTCAATTTGTGATAAAAATGATAACATC
GAGTCTCATTGCTATCATAAAAGAGTATATGATTGTTAAGTAACAATACC
TAAAGCTACTTTTACGCATGACTCAATGATATCAAGGTTAACACCATCTA
CATAAGGTAATAGGGACCACTCCCTGTGAGtataaacaaaaagttttaag
cTTTACATTAGGAAGTCACATTAAAGgtgaaaactaattttggtgTGTCA
AATATCAAAATTGTATCTTGAAATTGCCATTAGATGGacaaaatacacgc
tttttttataagaatggtgttttttcaattcatcataaatattcttaact
tttttaggaaaattgaaattgaatgaTAGTTGAAAATTCAGTTGAAATTC
CATGATAGTGGTATTCTTTCCTTatccttaattttttttgctaatttcat
cataaatattcttataaaaaaaggttgtACGAGGAAAAGAAggaaatttt
tcgataaaacgTTCTTCTTAGCCACgttttttgatgtttgatgAATTACT
ATGAGGTTTTTCTTCTCTTGTTTGATCAACTTTATCAACAACGCGTCTTT
ACTGAAAGGTGGACTGGAAACAAGGTTACACACCAAGAACACGAGATGGA
AATCAAGGGAGCATCggttttcgcacctatagaatttcccgccaaaatta
gaaAACAAACGCTGACattgcacaaaaaaaaattcttgtgcGCATGCGCT
TAAGGCAGAAGACAGAATTCGCGATATCTCATATTTCGTTTTCgtaacat
acacgtttttttataagaaacaactatataagaacgcaaggcttcgatgg
ccgaaatgttaagaacaagttaagaacattttaagcctttgccgactcta
aaacagccgaaactcaaaaatttaagaacatctgaaggcttcaaaaattt
tggacgttcttataaaaaaaatgtgtaccctCTGACAAAATGTAACAAGA
TTTCGTCACATCAGTATTTTACAGAAGGTGAAACAAAACTGTCCCAAATA
GTCCCGACTTATCCCCTAAAATGTATTAAACAAACAGAGAGCGATAGAAA
ACAAATGTAAAAGATAGAGGTCAtataaaaaagtcaaagaatAATAATCG
ATAAGAAATATAGGTCCAACAAGCAAAAATCTTGAGAACTCTGACTCGAA
TGTAGGACCTGCTATAAGGAGATACATATTCATCTACGGATGAATTTTTC
TGATCTGATTTAAGCCAATTTCACTTGACATTTAGATTTAGACAAAGAAA
TGACAatattaaaacttttaaagtgataaactttggtttaaaaaaagttt
ctatttttgttgcttataaaaaatgtcaaatctcagtgttaaaaatagat
gacttttttaaaaaagtcggaaaaaatattaaaatcaaaacaaagataaa
taaaatgctggaatgtgtaaaagctaaatGGTGTTGCAGGCTAATTGCAC
CATTTTCGTGTTTTCATAGCAAATCCTACATTCATCAAAACGTCAACAGA
CATTTTAGCAGCTTTTATAATTGGACTCCGGGAGAGTCCATTATTTATAA
AGTGTTTTATAATCAGATCAGATTTGACAAAACGTTATCGTTATTTGGGG
GTGAGGACATTATGCTATAAGATTTCAAAGTGATAAGACCTTCACTCCAG
GAGATTTAATAGTATACAGTGTATTATTATGTTAAAAATTTGAGCTTGAA
TTTTGCTTCAATTTTATACCTACACGTGCTTAAGAGACTGTAGTGTTGAA
AAGGGTTTTCACTGACAAAACTTAATTTCGAGATGGTTAACCCAGCAGTA
TTTAACAGTAACTTTGGTGAATGGAAAAAGAGAACGAAAAAAGATCGTTA
CATGATTTTACCACAGGATTTGACTTTGTTGAAATTGGTGAATTTTGAGG
ACTTTGTTGTCATGGATGTCATTGATAATATAGATTTTGGCAAAAAGGTA
GAATAGATCCGCCCTTTTGGTATTTTACCAAAGAAAATATCTAAGCCACC
TTAGCTTTCCTGTATCATACTGTATGACAGAAGAAAGCTCTGAAAAAGCA
GCAGAAATTTTAAACCTTATTTCCCTTTATTTTTCAGAACTCAGTGACAA
GCAAACAGTATGAAGGTAAGAAAAACTATTCAGTACAAAACCCTATAGTC
GATAATGAAGTGATTGGCATGCAACTACGCGATTGATTGAAATCTTATTT
TGATATCATCCAAAGATTTAAGCAGAATATAGACTTGAAAGCATGAATTC
AAAATTATAATTTGGGCCCAACATTGATGTCTCTTACCCCGATTATTTCG
CTGCATGAATTTATCTTGACAACATCCATTTTCTTTCCTCTTTTCAGAAT
TAAAGAACGCATTCATTGCGTTTGATCGGAATTGCGATGGATTCATCGAT
TCTGAAGATCTTGGATACGTCATGGGCAAACTTGGTCATGATCTGTCATC
TAAAGAAGTCAAAAAGGTTTTCAAAGATATCTGCAAACACAGTACGTAAA
ACTAAGTATTACTTTCAGCCTTGGCTTAACTAGACTGAGTTTTCTTCGAC
TGATCATAAAGCCATAAACCAATATTTGGGATTATCTTTATTAGGGGCCT
CTGCTAATCCTCAATcctcaaaaatgttcttacagaAAGTATGGAGGTAT
GTGAATCTTTCGCCTTTTAGTCATTCGCTTAATTAATTTCCTTGATAAGT
TGGTGAGGTTTTAGCTTGTAAGGGAGATGATGTTTCTATACGCGAACTGA
AGTGATGCTTTAGATAAGATAAGATCCAAGAGTGGAATTGAGTAGATTTT
GAAGGATTTCGGTAAACAAATGTTTCCTTGTTTGAACAAAAACCCAGGAG
GAAAAAGGTGTGTCCAATTTTCCCTTATTTCATCATGATTTTTGACAAGT
AAGTATAAATAAGGGAATAGTTGGAAAATCTCGTGCTATTCTATTCATAA
ATCAAAAAACTACCTTTCCGTGTTTCTCAAACGAATTTCGATAATTAGGT
TCACTAATAGGCTCAGATTATTAAGAAATGACTTGTAGCTTGTATGATAA
TTCGAAAAGCTAATAATCGAAAGGAATTTCTATTACTTCGTTTTAAAGTg
gagattttcttttgtttaaataaGTCTTAATGAAGACAGCTTGAGAATGC
TTTACAATGGTTTGCGTCCTGACGCACAGAGGCACTTTATCGACTTAAAA
TCGAAATGAAAAGTGATTATCATTTGCAATGGTGACGTTTAGACTCAAAG
GTAGCTTTGCCAGTCCTCGGATATTGCTAGCGTTTCacgtttcaagccta
aaaatgttcttttttcatcattttgtgaggATTCCTGTgcatttcctaag
aaattggttgTTGAAGAGTCTAcgaagtcttaaaatgttcttaaaatgtt
cttaacatattcaccatcgaagcattatgttcttagatagcttgttctta
tataaaaaacgttcAACACGTTAAAACAGCATCCATTAAACATCCCCACG
GCGTTTAATTAGGACTTATGGATTGCTAGTTTTCGAATACAAATGGACCA
TCGAGATTTCTCTAGCCAATTTAAGGTTGATACCTAAGACCCCCTATCTC
AACTCCAGGCGAGAAAGTCGAAACAGACAAACCCTTTTTGACtgttgaaa
atacaaaaactgacctaaaatcatttaaaatcaataaaagatgaaattaa
aaaaaaaattcataccaTAGTTTGACCAAATGATATTTTCTCCTAACATA
GGTAATGGCAAGATGGATTTCACAGATTTCGTAGAAATGATGGCACAAGA
TAAATTAGTTCTAACCACAAGCGAACAAGAGATCTTAGCAGCGTTCCAAT
TTCTTGATCAAAATCATGATGGTTATATCACCATAGATGAGTTACTACAA
CGTTTCCATGGCTGCCTGTCCGATACGGAAGCATCCCGGTTAATGTGTGA
AGCGGACGCTAATGGTGACGGAAAGATCGATTTCAACGGTGAGTGATTGG
TTCAGCCATTTTATTGGAAGATTTTAGTATGGTTATTATTAAAGTCACCA
TTTCATTAGTTTTATTCtttgagttaatttttcattagtCATCTAAAGAG
GGACATAAAGATTATTTGAGGATAAGAAATGTGTTAGTAAATTGAAAGCA
ATGACGGGGCAAAtcaagtattcatgatatgcaccaatgCAAtgttgcaa
cttttctgtttttgttccacccaagacgtcactttttctattttttaagt
gacgtattggatggaaaattttaaaaattctcaaaGACTCTCCAGtgatg
gtgcatatcatgaatataacaGTGTAATTTTCGACAAAGAAAGCtaaatt
ttcaacccttttgaattttgttttccaGAATTCAAACACATGATGTTTAA
TCAAGAACGAAGCATCTCATTGGCTCAATCTGAAGTAGAATTATACTcat
ga Coding sequence (CDS) from alignment at sc0000032_pilon:1530101..1535002+ >XLOC_041059 ID=XLOC_041059|Name=XLOC_041059|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1470bp|location=Sequence derived from alignment at sc0000032_pilon:1530101..1535002+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGAAACGTTTCGAGGGTTATAAATACGAGAAACTCTCAATAGCAAC
AGAAGAACAAAATGGAGTTATAGATAAACAACCTAATGGTCAGAATCATA
CAGGTTTAAACTTTAGTCTCGAATCAGTTGATGAACTATTAcacgaaaac
aaagaaaatagcAAAGGGTTGTGGAgcaatctttttgattttttaacttG
TGGTGCGTGCTGTAGAGTGGAGGTTTACTACCCTCGATATGAACATTTTC
AGATGGTGAAACGTTTCGAGGGTTATAAATACGAGAAACTCTCAATAGCA
ACAGAAGAACAAAATGGAGTTATAGATAAACAACCTAATGGTCAGAATCA
TACAGGTTTAAACTTTAGTCTCGAATCAGTTGATGAACTATTAcacgaaa
acaaagaaaatagcAAAGGGTTGTGGAgcaatctttttgattttttaact
tGTGGTGCGTGCTGTAGAGTGGAGGTTTACTACCCTCGATATGAACATTT
TCAGAACTCAGTGACAAGCAAACAGTATGAAGAACTCAGTGACAAGCAAA
CAGTATGAAGAATTAAAGAACGCATTCATTGCGTTTGATCGGAATTGCGA
TGGATTCATCGATTCTGAAGATCTTGGATACGTCATGGGCAAACTTGGTC
ATGATCTGTCATCTAAAGAAGTCAAAAAGGTTTTCAAAGATATCTGCAAA
CACAAATTAAAGAACGCATTCATTGCGTTTGATCGGAATTGCGATGGATT
CATCGATTCTGAAGATCTTGGATACGTCATGGGCAAACTTGGTCATGATC
TGTCATCTAAAGAAGTCAAAAAGGTTTTCAAAGATATCTGCAAACACAGT
AATGGCAAGATGGATTTCACAGATTTCGTAGAAATGATGGCACAAGATAA
ATTAGTTCTAACCACAAGCGAACAAGAGATCTTAGCAGCGTTCCAATTTC
TTGATCAAAATCATGATGGTTATATCACCATAGATGAGTTACTACAACGT
TTCCATGGCTGCCTGTCCGATACGGAAGCATCCCGGTTAATGTGTGAAGC
GGACGCTAATGGTGACGGAAAGATCGATTTCAACGGTAATGGCAAGATGG
ATTTCACAGATTTCGTAGAAATGATGGCACAAGATAAATTAGTTCTAACC
ACAAGCGAACAAGAGATCTTAGCAGCGTTCCAATTTCTTGATCAAAATCA
TGATGGTTATATCACCATAGATGAGTTACTACAACGTTTCCATGGCTGCC
TGTCCGATACGGAAGCATCCCGGTTAATGTGTGAAGCGGACGCTAATGGT
GACGGAAAGATCGATTTCAACGAATTCAAACACATGATGTTTAATCAAGA
ACGAAGCATCTCATTGGCTCAATCTGAAGTAGAATTATACTcatgaAATT
CAAACACATGATGTTTAATCAAGAACGAAGCATCTCATTGGCTCAATCTG
AAGTAGAATTATACTcatga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000032_pilon | genome | sc0000032_pilon:1530101..1535002 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 664-735:4831 |
| Aaloc | 427-660:4204 |
| Aaloc | 283-423:2800 |
| Aaloc | 253-279:2538 |
| Aaloc | 1-252:1 |
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