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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000061_pilon:1386296..1388045+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041056 ID=XLOC_041056|Name=XLOC_041056|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1750bp|location=Sequence derived from alignment at sc0000061_pilon:1386296..1388045+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCACAATCTGCACAAACATTTCAGCCACCCAAATCATGGGAGTTGAG
CTTATATGAATTACATCGTACTCCACAAGAAGCAATAACAGATGATACAG
AGATAGTGTTGTCACCAAGAAGTCTTCACAGTGAATTAATGTGTCCCATT
TGTTTGGATATGTTAACTACAACGATGACCACCAAAGAATGTCTTCATAG
GTTTTGTCATGATTGTATTATCACTGCATTGAGAGCTGGTAACAAAGAAT
GCCCTACTTGTCGAAAGAAATTGATTTCGAAACGATCTTTGAGAAGAGAT
CCAAATTTTGATTCTCTCATCGaaaaggtattttttttcattatgtatat
gagaagatgaagaaaatactttttgataatttagtAATTTATTTAGGAAT
TCGATAAGATGCTATTTACCATCAGTAGATTTCATCAGGAGAATCATTTT
ACTTTCAAGAcaactttcaactttttgctTCTCTCATTTATGTTACAGAT
CTACCCTAATCGTGACGAATATGATGCACAGCAAGAACAAGTGCTTGAGA
AACTCAATCAACACACCAATCAACAGGCTTTAACCAACAGTATCGAGGAA
GGTAATCCACTATTTATAATAAAGGCTTTAAAGATCTCAAAGAATCGCAT
TTCAGGacttgtttttaaatatttatttccTTCATGTTCTTTGTTTTTTG
GATAATTATTCTCATCTCAAACGAGAACCGTggactttttaatatttttg
ctaTAATGAGCGAAAGCCGtactttttgtttaaaatcgATTTAATACtca
gaaaataatatttgagAGACAAAGAAATTATTACGCtttttttACAATGT
AAATGACTCTAATAGGGCTCACAATTATATCACATtcattagtaaaaaaa
aaaaaaagtcgtGCAAGGAGCTCTGGATACGAGATTGGAATAACGGTTTT
CTAACACTTTGACATCATAATTTTCCAGGGTTGCGACTTCAAGCACAGAA
TCGTTTGCAAAGGATGTTgaagcaacaacaaaagaaagcaGCGGAGGCGC
TAGCTGCTCAACAGGCTTCAAATGCTCAAGAAGAACAAGGTGGGATTAGT
TTCTAGTCTAAATGATCATTTATCAATATCAATTGTTTCAAGATCGTGAT
TTAAAAGAGCATTTGATCATTATCGTGATTTTGAACGATGATATATTTCT
GTCTCGGTTTCACCCATTCTTATAAACTTAATAACAACTAGATATTCTAT
CTTTGACAGCCCCTCCACCCGACGAACAACCTTCAACCTCATCAAACCAG
CAAACAAAAGACGAAAAGCCGAGTTCCCCAGCTACACCGTCCGCGTCAAA
AACGAACAAGCGAAAAGCTGTCAAAGAAAAACTACCAAAGCAAATATCAA
CTGAGGACGAAAATTCGAATAGTGCAACTAGTGTAGAAACTATTGAAACA
TTCATAGATGATATTGAACTTATTTTCCACCCACATCCAGATTTTCCGCA
TTACACTTCACGCTATATCAAAACAACAGGGAACGCTACGATGGCTCACT
TGTCACATTTTCTCATCATTCGAGCACGCTTAGATCGTGAACAACAAGAA
GCTACAGAATGcgatcattttaaaatctttgctttgaCAGACACTCATGA
TTACCATGAACTAGAAGACTCGATGACTTTGGGAGACGCGTTCGCTATTC
ATTGGCGCGAAAACAAACCATTAGAACTGTTCTTCTCGCCTATTTATTAG
Coding sequence (CDS) from alignment at sc0000061_pilon:1386296..1388045+ >XLOC_041056 ID=XLOC_041056|Name=XLOC_041056|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2064bp|location=Sequence derived from alignment at sc0000061_pilon:1386296..1388045+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCACAATCTGCACAAACATTTCAGCCACCCAAATCATGGGAGTTGAG
CTTATATGAATTACATCGTACTCCACAAGAAGCAATAACAGATGATACAG
AGATAGTGTTGTCACCAAGAAGTCTTCACAGTGAATTAATGTGTCCCATT
TGTTTGGATATGTTAACTACAACGATGACCACCAAAGAATGTCTTCATAG
GTTTTGTCATGATTGTATTATCACTGCATTGAGAGCTGGTAACAAAGAAT
GCCCTACTTGTCGAAAGAAATTGATTTCGAAACGATCTTTGAGAAGAGAT
CCAAATTTTGATTCTCTCATCGaaaagATGTCACAATCTGCACAAACATT
TCAGCCACCCAAATCATGGGAGTTGAGCTTATATGAATTACATCGTACTC
CACAAGAAGCAATAACAGATGATACAGAGATAGTGTTGTCACCAAGAAGT
CTTCACAGTGAATTAATGTGTCCCATTTGTTTGGATATGTTAACTACAAC
GATGACCACCAAAGAATGTCTTCATAGGTTTTGTCATGATTGTATTATCA
CTGCATTGAGAGCTGGTAACAAAGAATGCCCTACTTGTCGAAAGAAATTG
ATTTCGAAACGATCTTTGAGAAGAGATCCAAATTTTGATTCTCTCATCGa
aaagATCTACCCTAATCGTGACGAATATGATGCACAGCAAGAACAAGTGC
TTGAGAAACTCAATCAACACACCAATCAACAGGCTTTAACCAACAGTATC
GAGGAAGATCTACCCTAATCGTGACGAATATGATGCACAGCAAGAACAAG
TGCTTGAGAAACTCAATCAACACACCAATCAACAGGCTTTAACCAACAGT
ATCGAGGAAGGGTTGCGACTTCAAGCACAGAATCGTTTGCAAAGGATGTT
gaagcaacaacaaaagaaagcaGCGGAGGCGCTAGCTGCTCAACAGGCTT
CAAATGCTCAAGAAGAACAAGGGTTGCGACTTCAAGCACAGAATCGTTTG
CAAAGGATGTTgaagcaacaacaaaagaaagcaGCGGAGGCGCTAGCTGC
TCAACAGGCTTCAAATGCTCAAGAAGAACAAGCCCCTCCACCCGACGAAC
AACCTTCAACCTCATCAAACCAGCAAACAAAAGACGAAAAGCCGAGTTCC
CCAGCTACACCGTCCGCGTCAAAAACGAACAAGCGAAAAGCTGTCAAAGA
AAAACTACCAAAGCAAATATCAACTGAGGACGAAAATTCGAATAGTGCAA
CTAGTGTAGAAACTATTGAAACATTCATAGATGATATTGAACTTATTTTC
CACCCACATCCAGATTTTCCGCATTACACTTCACGCTATATCAAAACAAC
AGGGAACGCTACGATGGCTCACTTGTCACATTTTCTCATCATTCGAGCAC
GCTTAGATCGTGAACAACAAGAAGCTACAGAATGcgatcattttaaaatc
tttgctttgaCAGACACTCATGATTACCATGAACTAGAAGACTCGATGAC
TTTGGGAGACGCGTTCGCTATTCATTGGCGCGAAAACAAACCATTAGAAC
TGTTCTTCTCGCCTATTTATTAGCCCCTCCACCCGACGAACAACCTTCAA
CCTCATCAAACCAGCAAACAAAAGACGAAAAGCCGAGTTCCCCAGCTACA
CCGTCCGCGTCAAAAACGAACAAGCGAAAAGCTGTCAAAGAAAAACTACC
AAAGCAAATATCAACTGAGGACGAAAATTCGAATAGTGCAACTAGTGTAG
AAACTATTGAAACATTCATAGATGATATTGAACTTATTTTCCACCCACAT
CCAGATTTTCCGCATTACACTTCACGCTATATCAAAACAACAGGGAACGC
TACGATGGCTCACTTGTCACATTTTCTCATCATTCGAGCACGCTTAGATC
GTGAACAACAAGAAGCTACAGAATGcgatcattttaaaatctttgctttg
aCAGACACTCATGATTACCATGAACTAGAAGACTCGATGACTTTGGGAGA
CGCGTTCGCTATTCATTGGCGCGAAAACAAACCATTAGAACTGTTCTTCT
CGCCTATTTATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061_pilon | genome | sc0000061_pilon:1386296..1388045 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 544-1032:1262 |
| Aaloc | 433-540:981 |
| Aaloc | 328-429:499 |
| Aaloc | 1-327:1 |
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