|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000214_pilon:458106..464241+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041055 ID=XLOC_041055|Name=XLOC_041055|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6136bp|location=Sequence derived from alignment at sc0000214_pilon:458106..464241+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCAATTTGTCAACGTTGGTTTGCACTGGTTCTTTTGTTGATGAC
GGTGGCCCAAGCTAAGCGTAAGTCAGATTttattcagtttcaaaaattca
tcaCCCCTTTGCATTAACACGTAATCGCCAATAAACTTTTTAGCTTATTT
TGAGTTGTCTTGTCACATCCCTTACTGTGCAGTGGCCACAAACATATCAT
GCCATTTATTGAGGTATAAATATTATGCTTTTTTCATACAATAATTCAGA
ATTCGTTTAAACCATGATTCAAATCATATTTTAGAGACAATTTGTCAAGG
CAGCAACCACCTACAACAGAAATTTGCATATGAACCTACACtttcatttc
catcaaaaaatTATCCACATCTTGCCATCAGCTATGACACAACATCAAAA
GTATCCAGAATACTGGCACCATCATCAAACTCGGCTTGGAAGATAGTGGC
AGGGCTTTGTGGCCAAGGGTTCAGCTTTGAATCAACAACACAACCTAACC
ATTTCTTGAGACATCGACACCTTCTCTTGTTCGTGGATCCCTTCGTAAAT
ACTGCCCTCTACAAGAATGACGCTTGCTTCAAACCCGTCACTGGTCTTGC
CGATTGCAATGAAGTCTCGTTTCAATCCATCAACTATCCAGACCGTTTCT
TGCGACATCAAGGCTATCGAATGAAACTACATCAAAATGACGGCTCTTCT
CTGTTCAAGAATGATGCGACATTTAATATTCGTAAGATTTGAAATATTAT
TGCAGTTTTATCTTCATTATACGCTTGTGGGCTGCTGAACTAACCATTGG
TTCGGAATCGAGGGACTAATTCGCTAATACAGTGGACCTtgttaattcga
acttctattattcgaacttcttCTCAGGTCCCGTCGCAAGGACAATCCTT
CGTAAAATACtctctctattattcgaatatcTCCGCAATACGAACAGATT
GACCTTTCTACTCAAATTCGAATTATTGAGAGTCCCTTAATACAGAACAA
TATCTAAATAGTTATCCTGTATATTTCGACTGAATGAACATAATATATTT
ATCAACCAGGATTCAGACTTCCTCTGCCTACATAAAGCAATTCAATCTGA
AAACTAAAAGTTTGAAGCCCTTAGAGCCCTTTGTATTTACACGCGAGGCT
TTACCACCAATCGAGTTAGTTTATCTTTGTCAGGGTTTTAACACGTCCAC
TGCGGGAGCCCTTTTCATAAATCGAAAATACGATCCCTTGGAATGTTTAA
CTTTCAGATGCTCCTGTTGCCTCAATTTGGCTTCAAATACCCTGAAATTG
TATCCCAATCGATGTAGAATTTCATGTAAATTCCAAAAAGTGTAGTAAAA
ATGTTTCTGTAGCTAAGCTTCTGGCCCTTTGAAGAACAACCTTTATGCTG
ACCCACTTGAAGTTGTCGGcgataattcgaacttatttcTAGTCCCCTTC
AAgggggggACcatcttaaaatactttctacaattcgaatctctctataa
ttcgaacaaatacgATTTCCTGTTCGAGTTCAAATTACCAAGAGTCCACT
GTATTAATGAGCTCATATGGGTGTTTTTAATCATTAGATATGACTTAGGG
TTCGATTTGAACTGTTTTTTGGGTTTCTGAAGTGTTCATGGAGCCCTGTT
AATACGTTCACTGCTGAGCCCTTTTCAGTAACAATAGAAATTCCGACCtc
ttgaaatttcatcaaaagtttgTCTTTTAGAGACTCCTGTGGCCTCATTT
TTGCTTCAAATGCCATCAAATTGCATATCCATCAGCGCagaattttgttt
aaattccAGAAATATGCAATAACAAAGTTTCTCAATATGAAAGTTATGAC
CCTTTTAAGGTACAACCGGTATTTCAACCCTTTTACTACGAGTATACTCA
TTGTTAGCAAAGAATGTGTAAAAAGACAGGCTATGTGTATTGTAATTCGG
CTCACTGTGTTTCTTAGAGCCCAAATCAGTcgcaaaaatataattccaag
aATGAgttaaaaagttctttttttgcaATAGCAATGCATTATGATTTAAA
ATTTGCTCATATCATAATTCAAATCATATTTTAGAGACAATTTGTCATGG
CAGCAACCACCTACAACAGAAATTTGCATATGAACCTACACtttcatttc
catcaaaaaatTATCCACATCTTGCCATCAGCTATGACACAACATCAAAA
GTATCCAAAATACTGGCACCATCATCAAACTCGGCTTGGAAGATAGTGCC
AGGGCTTTGTGGCCAAGGGTTCAGCTTTGAATCAACAACACAACCTAACC
ATTTCTTGAGACATCGACACCTTCTCTTGTTCGTGGATCCCTTCGTAAAT
ACTGCCCTCTACAAGAATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGC
CGATTGCAATGAAGTCTCGTTTCAATCCATCAACTATCCAGACCGTTTCT
TACGACATCAAGGCTATCGAATGAAACTCCATCAAAATGACGGCTCTTCT
CTGTTCAAGAATGATGCGACATTTAATATTCGTAAGATTTGAAATATTAT
TGCAGTTTTATCTTCATTATACGCTTGTGGGCTGCTGAACTAACCATTGG
TTCGGAATCGAGGGACTAATTCGCTAATACAGTGGACCTtgttaattcga
acttctattattcgaacttcttCTCAGGTCCCGTCGCAAGGACAATCCTT
CGTAAAATACtctctctattattcgaatatcTCCGCAATACGAACAGATT
GACCTTTCTACTCAAATTCGAATTATTGAGAGTCCCTTAATACAGACAAT
ATCTAAATAGTTATCCTGTATATTTCGACTGAATGAACATAATATATATT
TATCAACCAGGATTCAGACTTCCTCTGCCTACATAAAGCAATTCAATCTG
AAAACTAAAAGTTTGAAGCCCTTAGAGCCCTTTGTATTTACACGCGAGGC
TTTACCACCAATCGAGTTAGTTTATCTTTGTCAGGGTTTTTAACACGTCC
ACTGCGGGAGCCCTTTTCATAAATCGAAAATACGATCCCTTGGAATGTTT
AACTTTCAGATGCTCCTGTTGCCTCAATTTGGCTTCAAATACCCTGAAAT
TGTATCCCAATCGATGTAGAATTTCATGTAAATTCCAAAAAGTGTAGTAA
AAATGTTTCTGTAGCTAAGCTTCTGGCCCTTTGAAGAACAACCTTTATGC
TGACCCACTTGAAGTTGTCGGcgataattcgaacttatttcTAGTCCCCT
TCAAGGGGGGACcatcttaaaatactttctacaattcgaatctctctata
attcgaacaaataagatttccTGTTCGAGTTCAAATTACCAAGAGTCCAC
TGTATTAATGAGCTCATATGGGTGTTTTTAATCATTAGATATGACTTAGG
GTTCGATTTGAACTGTTTTTTGGGTTTCTGAAGTGTTCATGGAGCCCTGT
TAATACGTTCACTGCTGAGCCCTTTTCAGTAACAATAGAAATTCCGACCt
cttgaaatttcatcaaaagtttgTCTTTTAGAGACTCCTGTGGCCTCATT
TTTGCTTCAAATGCCATCAAATTGCATATCCATCAGCGCagaattttgtt
taaattccAGAAATATGCAATAACAAAGTTTCTCAATATGAAAGTTATGA
CCCTTTTAAGGTACAACCGGCATTTCAACCCTTTTACTACGAGTATACTC
ATTGTTAGCAAAGAATGTGTAAAAAGACAGGCTATGTGTATTGTAATTCG
GCTCACTGTGTTTCTTAGAGCCCAAATCAGTcgcaaaaatataattccaa
gaATGAgttaaaaagttctttttttgcaATAGCAATGCATTATCATTTAA
AATTTGCTCATATCATAATTCAAATCATATTTTAGAGACAATTTGTCATG
GCAGCAACCACCTACAACAGAAATTTGCATATGAACCTACACtttcattt
ccatcaaaaaatTATCCACATCTTGCCATCAGCTATGACACAACATCAAA
AGTATCCAGAATACTGGCACCATCATCAAACTCGGCTTGGAAGATAGTGG
CCAGGGCTTTGTGGCCAAGGGTTCAGCTTTGAATCAACAACACAAACCTA
ACCATTTCTTGAGACATCGACACCTTCTCTTGTTCGTGGATCCCTTCGTA
AAATACTGCCCTCTACAAGAATGACGCTTGCTTCAAACCCGTCGCTGGTC
TTGCCGATTGCAATGAAGTCTCGTTTCAATCCATCAACTATCCAGACCGT
TTCTTACGACATCAAGGCTATCGAATGAAACTCCATCAAAATGACGGCTC
TTCTCTGTTCAAGAATGATGCGACATTTAATATTCGTAAGATTTGAAATA
TTATTGCAGTTTTATCTTCATTATACGCTTGTGGGCTGCTGAACTAACCA
TTGGTTCGGAATCGAGGGACTAATTCGCTAATACAGTGGACCTtgttaat
tcgaacttctattattctaACTTCTTCTCCGGTCCCGTCGCAAGGACAAT
CCTTCGTAAAATACtctctctattattcgaatatcTCCGCAATACGAACA
GATTGACCTTTCTACTCAAATTCGAATTATTGAGAGTCCCTTAATACAGA
ACAATATCTAAATAGTTATCCTGTATATTTCGACTGAATGAACATAATAT
ATTTATCAACCAGGATTCAGACTTCCTCTGCCTACATAAAGCAATTCAAT
CTGAAAACTAAAAGTTTGAAGCCCTTAGAGCCCTTTGTATTTACACGCGA
GGCTTTACCACCAATCGAGTTAGTTTATCTTTGTCAGGGTTTTAACACGT
CCACTGCGGGAGCCCTTTTCATAAATCGAAAATACGATCCCTTGGAATGT
TTAACTTTCAGATGCTCCTGTTGCCTCAATTTGGCTTCAAATACCCTGAA
ATTGTATCCCAATCGATGTAGAATTTCAtgtaaattccaaaaattgtaGT
AAAAATGTTTCTGTAGCTAAGCTTCTGGCCCTTTGAAGAACAACCTTTAT
GCTGACCCACTTGAAGTTGTCGGcgataattcgaacttatttcTAGTCCC
CTTCAAGGGGGGACcatcttaaaatactttctacaattcgaatctctcta
taattcgaacaaataagatttccTGTTCGAGTTCAAATTACCAAGAGTCC
ACTGTATTAATGAGCTCATATGGGTGTTTTTAATCATTAGATATGACTTA
GGGTTCGATTTGAACTGTTTTTTGGGTTTCTGAAGTGTTCATGGAGCCCT
GTTAATACGTTCACTGCTGAGCCCTTTTCAGTAACAATAGAAATTCCGAC
CtcttgaaatttcatcaaaagtttgTCTTTTAGAGACTCCTGTGGCCTCA
TTTTTGCTTCAAATGCCATCAAATTGCATATCCATCAGCGCagaattttg
tttaaattccAGAAATATGCAATAACAAAGTTTCTCAATATGAAAGTTAT
GACCCTTTTAAGGTACAACCGGTATTTCAACCCTTTTACTACGAGTTTAC
TCATTGTTAGCAAAGAATGTGTAAAAAGACAGGCTATGTGTATTGTAATT
CGGCTCACTGTGTTTCTTAGAGCCCAAATCAGTcgcaaaaatataattcc
aagaATGAgttaaaaagttctttttttgcaATAGCAATGCATTGTCATTT
AAAATTTGCTCATATCATAATTCAAATCATATTTTAGAGACAATTTGTCA
AGGCAGCGACCACCTACAACAGAAATTTGCATATGAACCTACACtttcat
ttccatcaaaaaatTATCCAAATCTTGCCATCAGCTATGACACAACATCA
AAAGTATCCAAAATACTGGCACCATCATCAAACTCGGCTTGGAAGATAGT
GCCAGGGCTTTGTGGCCAAGGGTTCAGCTTTGAATCAACAACACAACCTA
ACCATTTCTTGAGACATCGACACCTTCTCTTGTTCGTGGATCCCTTCGTA
AATACTGCCCTCTACAAGAATGACGCTTGCTTCAAACCCGTCGCTGGTCT
TGCCGATTGCAATGAAGTCTCGTTTCAATCCATCAACTATCCAGACCGTT
TCTTGCGACATCAAGGCTATCAAATGAAACTCCATCGAAATGACGGCTCG
TCTCTGTTCATGAATGATGCAACGTTtaatatttga Coding sequence (CDS) from alignment at sc0000214_pilon:458106..464241+ >XLOC_041055 ID=XLOC_041055|Name=XLOC_041055|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2820bp|location=Sequence derived from alignment at sc0000214_pilon:458106..464241+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCAATTTGTCAACGTTGGTTTGCACTGGTTCTTTTGTTGATGAC
GGTGGCCCAAGCTAAGCATGGCTTCAATTTGTCAACGTTGGTTTGCACTG
GTTCTTTTGTTGATGACGGTGGCCCAAGCTAAGCAGACAATTTGTCAAGG
CAGCAACCACCTACAACAGAAATTTGCATATGAACCTACACtttcatttc
catcaaaaaatTATCCACATCTTGCCATCAGCTATGACACAACATCAAAA
GTATCCAGAATACTGGCACCATCATCAAACTCGGCTTGGAAGATAGTGGC
AGGGCTTTGTGGCCAAGGGTTCAGCTTTGAATCAACAACACAACCTAACC
ATTTCTTGAGACATCGACACCTTCTCTTGTTCGTGGATCCCTTCGTAAAT
ACTGCCCTCTACAAGAATGACGCTTGCTTCAAACCCGTCACTGGTCTTGC
CGATTGCAATGAAGTCTCGTTTCAATCCATCAACTATCCAGACCGTTTCT
TGCGACATCAAGGCTATCGAATGAAACTACATCAAAATGACGGCTCTTCT
CTGTTCAAGAATGATGCGACATTTAATATTCAGACAATTTGTCAAGGCAG
CAACCACCTACAACAGAAATTTGCATATGAACCTACACtttcatttccat
caaaaaatTATCCACATCTTGCCATCAGCTATGACACAACATCAAAAGTA
TCCAGAATACTGGCACCATCATCAAACTCGGCTTGGAAGATAGTGGCAGG
GCTTTGTGGCCAAGGGTTCAGCTTTGAATCAACAACACAACCTAACCATT
TCTTGAGACATCGACACCTTCTCTTGTTCGTGGATCCCTTCGTAAATACT
GCCCTCTACAAGAATGACGCTTGCTTCAAACCCGTCACTGGTCTTGCCGA
TTGCAATGAAGTCTCGTTTCAATCCATCAACTATCCAGACCGTTTCTTGC
GACATCAAGGCTATCGAATGAAACTACATCAAAATGACGGCTCTTCTCTG
TTCAAGAATGATGCGACATTTAATATTCAGACAATTTGTCATGGCAGCAA
CCACCTACAACAGAAATTTGCATATGAACCTACACtttcatttccatcaa
aaaatTATCCACATCTTGCCATCAGCTATGACACAACATCAAAAGTATCC
AAAATACTGGCACCATCATCAAACTCGGCTTGGAAGATAGTGCCAGGGCT
TTGTGGCCAAGGGTTCAGCTTTGAATCAACAACACAACCTAACCATTTCT
TGAGACATCGACACCTTCTCTTGTTCGTGGATCCCTTCGTAAATACTGCC
CTCTACAAGAATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGATTG
CAATGAAGTCTCGTTTCAATCCATCAACTATCCAGACCGTTTCTTACGAC
ATCAAGGCTATCGAATGAAACTCCATCAAAATGACGGCTCTTCTCTGTTC
AAGAATGATGCGACATTTAATATTCAGACAATTTGTCATGGCAGCAACCA
CCTACAACAGAAATTTGCATATGAACCTACACtttcatttccatcaaaaa
atTATCCACATCTTGCCATCAGCTATGACACAACATCAAAAGTATCCAAA
ATACTGGCACCATCATCAAACTCGGCTTGGAAGATAGTGCCAGGGCTTTG
TGGCCAAGGGTTCAGCTTTGAATCAACAACACAACCTAACCATTTCTTGA
GACATCGACACCTTCTCTTGTTCGTGGATCCCTTCGTAAATACTGCCCTC
TACAAGAATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGATTGCAA
TGAAGTCTCGTTTCAATCCATCAACTATCCAGACCGTTTCTTACGACATC
AAGGCTATCGAATGAAACTCCATCAAAATGACGGCTCTTCTCTGTTCAAG
AATGATGCGACATTTAATATTCAGACAATTTGTCAAGGCAGCGACCACCT
ACAACAGAAATTTGCATATGAACCTACACtttcatttccatcaaaaaatT
ATCCAAATCTTGCCATCAGCTATGACACAACATCAAAAGTATCCAAAATA
CTGGCACCATCATCAAACTCGGCTTGGAAGATAGTGCCAGGGCTTTGTGG
CCAAGGGTTCAGCTTTGAATCAACAACACAACCTAACCATTTCTTGAGAC
ATCGACACCTTCTCTTGTTCGTGGATCCCTTCGTAAATACTGCCCTCTAC
AAGAATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGATTGCAATGA
AGTCTCGTTTCAATCCATCAACTATCCAGACCGTTTCTTGCGACATCAAG
GCTATCAAATGAAACTCCATCGAAATGACGGCTCGTCTCTGTTCATGAAT
GATGCAACGTTtaatatttgaAGACAATTTGTCAAGGCAGCGACCACCTA
CAACAGAAATTTGCATATGAACCTACACtttcatttccatcaaaaaatTA
TCCAAATCTTGCCATCAGCTATGACACAACATCAAAAGTATCCAAAATAC
TGGCACCATCATCAAACTCGGCTTGGAAGATAGTGCCAGGGCTTTGTGGC
CAAGGGTTCAGCTTTGAATCAACAACACAACCTAACCATTTCTTGAGACA
TCGACACCTTCTCTTGTTCGTGGATCCCTTCGTAAATACTGCCCTCTACA
AGAATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGATTGCAATGAA
GTCTCGTTTCAATCCATCAACTATCCAGACCGTTTCTTGCGACATCAAGG
CTATCAAATGAAACTCCATCGAAATGACGGCTCGTCTCTGTTCATGAATG
ATGCAACGTTtaatatttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000214_pilon | genome | sc0000214_pilon:458106..464241 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 964-1410:5690 |
| Aaloc | 517-960:2087 |
| Aaloc | 70-513:287 |
| Aaloc | 1-66:1 |
|
