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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000214_pilon:468073..474805+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041054 ID=XLOC_041054|Name=XLOC_041054|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6733bp|location=Sequence derived from alignment at sc0000214_pilon:468073..474805+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTTTTATTGTTTTAGGTATCATTATTTTGGAAGAATCACCTTACGAAAA
AGGCGTTTTCCAACTCGACATCAAACTCACCGAAAGGTACGatgtttcaa
attattttttcgaaaaatccgtCCTCCTTTATGTAAGACCTTGTAACATT
ATATAATAAGGTACAATCAAAGTAGTGATTTCACCTAAGCTTCAAGACTT
TAGAGATTTTAAAGGGGAAAATACTCGATAAACCTGTAGCGTTTAAATTT
GGTAATAATCGTTGGCTATTGATTCTTTCTATCTTACCCGTCTTCTTCTT
AATCATCAGGTTTGCATTATTCTTttgcattctttttttaaaggggGGTA
TAACCGGTATTAGTTCTATCGGTGGCTCGGTGCTCGAAGAACAAGGAAAA
AATTGCCGGTATCTTGCCATGCGGTGACAAAATATgagtttcaaatgttt
ttttcattacTTCGGTTTCGTAGAGGTGCTTAGAATTGCATATGATTCCG
TAGGACACCAGTAGCGTTCTCAGGGGTGTcggaaaatttgtgtaggaaag
CGCAATTTTGTTACGAAGTTATTATCTTTTAATGTTATGAATAGATAGTT
ACTTTGTCATAAacatctgctctcctacacaaattttctgACACCCCTGA
GAACGCTACTGGACACCTCTTGTATCATTGACTAAGTTTTCGTAAGTCCC
ACTAATTTGATATTCAGGCACCTCTACGAATTCAATGCTGGAGTTCATCT
TAATcctttatatcaattttttcagATATCCTTTTGAACCACCGTCCGTT
AAATTCATCACTCCAATTTACCATCCAAATGTCGACACTGCCGGAAGAAT
CTGTTTGGATCTACTCAAAATGCCACCAAAAGTAATtattaaaacttgtt
tttattttttttcaagcccAACGCTCGCAGACATGTCACACCCGGTCGCA
TCAGCACCAACTCTATCTGACCTtaaactgaaattgaaaaaataacaagC
CATATGCTGAATCATGGAATATAAAACTAACaggagtttttttaattttc
gggGGGAAATGGTTTCAGTCACTTTTTAGATAACATTGCACTCCTTAAAC
AAATCAATCCTTTGATACATCTTTAGTAAAAAAGTGTCTACTAACAGAAG
CttcttgttcatttttctaaaatttatttgtAGACGTTTCGGCTTCTCAA
CAGAGAACCATCCTCAGTAcagtaaaaaattgaaatgattaaaatgaatt
ttagctacaaattctaaaagcagttttgaaaaatgggtaatgataaataa
attagtaaaatgtcattaaaacaataaaacattatCTAATTTCTAAACGA
AAAGTAATGACgcttaaatctcaaaacatGAATTCTGAAAAAGATCTCAT
TTGCTTAAACAATAGTAAAGGTCTAGAAAGTCTTTGTATATTAATTGTGT
GCTTTTgtctttttatataaaatgcCTCACTGATTTTTCTTTGTCCTTCT
TTTTGCAAACAACCAGAAAAATCTATTGCGCATTTTTTGCACAAGGGTCC
TTAAAACTCCATTGTTGGGCagtttgcaaaaaatcagataaaaccattga
gccaatcccgagaaaagcttgtaacagacgaacggacggatatgggttaa
tttataggatctTCAGGTAGTTTCAAAAATGGTGCCAGAAATGAACAAGT
AAGAAGATGTTGTTAAAATCAACGTCTTTTGAGGCCTTTAGGCTACCACA
AAGCTCAGAATAGTCGACTATACTATGCAATTTACTGCTCAGACATTTGA
AAGAGAAAGTTAACTTTCTTGTAGTGTGACGTAGAAGTAGAATGTAGctg
aaatatttgacgtcaaataaaaaatatcatgcATATGAAAAGTTTTCATA
ATTCTAAACAacttcagttttgaaaaaaacctCTCAGCGCATGCAGAAGT
AATTCTCATCCTGTCAAAACTGTCAGTTATCGTAATAAAGTTAGTGAaaa
gtaaaaagtgaaaaataagcaACCGAAATGGTTACTTTTTTCGATCGAAA
TGGCGTGGAATTAACCGTCACTCCATCAAAGTTTGAACAATTAAAGAAGT
GTGGCTTGCTTCCAGCCAACGCAGGTCAACCATCTAAAGTTAAGTCAAAC
TTAGCAAAAAACAGCCATCATAAAGAAGTTAGCGAAAAGTTGGCGCCCAA
AATGGTTACTTTTGTCGATCGAAATGGTGTGGAATTAACCGTCACTCCAT
CAAAGTTTGAACAATTAAAGAAGTGTGGCTTGCTTCCAGCCGACGCAGGT
CAACCATCGAAAGTTAAGTCAAACTTAGCAAAAAGCAGCCATCTTAAAGA
AGTTAGCGAAAAGTTGGCGCCCAAAATGGTTACTTTTGTCGATCGAAATG
GCGTGGAATTAACCGTCACTCCATCAAAGTTTGAACAATTAAAGAAGTGT
GGTGGCTCAGTCAAGCCAACGCAGCTTCAAGCCACGCCAGGTCGCCAAAG
TTGGTTTCAATCAAAACttagcaaacaaaaaaaaaaacaaccatcaaaaa
aaGTTAGCGAAAAGTTGGCGCCCAAAATGGTTACTTTTGTCGATCGAAAT
GGCGTGGAATTAACCGTCACTCCGTCAAAGTTTGAACAATTAAAGAAGTG
TGGCTTGCTTCCAGCCAACGCAGGTCAGCCATCAAAAGTTAAGTCAAACT
TAGCAAAAAACAgccatcataaaaaagttagCGAAAAGTTGGCGCCCAAA
ATGGTTACTTTTGTCGATCGAAATGGCGTGGAATTAACCGTCACTCCGTC
AAAGTTTGAACAATTAAAGAAGTGTGGCTTGCTTCCAGCCAACGCAGGTC
AACCTCAACCAtcaaaagttaagtcaaacttagcaaaaaacagtcatcat
aaaaaagttaccgaaaagtTGGCGCCCAAGATGGTCACAGTAAACAAGAC
AGAAGATGAACAAAGCCTTGGCATATCAAAAGAACGTTTAGCCTTTGCAC
AACAACTCATTAAGGAAGCCCAAGAGGCTCCCTTGCCCGAAGATGACGGT
CGATGGTGAACTCTTCTCCGCatcaaaaacgtaaaaaaaaactaaaaaac
tacAAACTCCtgaaattattttgcattcgatgTAAATATAAATCTGTATA
ATTAAATTACGCTGTGTATCATTTCAATTTCCACTCAATCTTTCAGctct
cagaaaaaaacaattataacGCCTTTAAACTTGCCCTCGTAGTTTTAGTG
CTTGATTTTTAAACATACTGTATATCTTTGTGAAAAGAGCAAATGCGATA
TTGATATAAGCATGAAcctataaacgactggacatctatcttttattgtc
tctttgaagcgagcttcgttgccgcctgtattttaaaattggtatgaaaa
atccgacaatattccgtcataattttatttctttgaattagttaggtaaa
aggattgatagagcttgaacattttactcctaatgtacaaaaaaattatt
ttcgaattttttcacaagtttgtaatatattttatcaacattttcaactc
taaaatgcagaatttcaactgcgtgtatacttttgaatcccttttgtcac
tccaataattttttttatgacttgaaaaaaatagtttgccaaagtttaga
gcttgtgtcataagaatatcgaaattagataTGCGAcactttctaaaatt
attagacacttttaagtcaaaatttagaaataatagtcggagttttgaca
agctgacgatgattttgcctctgttatctttgttatgatatagataaaag
acttgagaagactagaacaacagagacttttgtcgaagttttgacgttgt
tagcaaggtactcccaaatggtatatcatcaaaatctattgtttcatttt
atgcttttaacgaggcggcaacgaagctagcagccctttctacaaaaaga
caaaggagatggatgtctagtcgtttatatgttcatgatataTGATATAA
GATTCTTCAGTTCGAAGACTCACTAATGACTCCACAGAATGAAGACACGT
TTTTTCAATAAGAACAtctataaaatttttgaagcctccagatgttctta
acgttttgagttttaatcctaaaaatgttcttaaaatgttcttattttca
ccattttgtcagtctttttatccattttcctaagaaaataggtgtttatT
TAGGGACCGCAAagcccttaaaatgttcttaatttgttcttaatattttt
ggccatcgaagccttatgttcttatatagtttgttcttataaaaaggcgt
GTATGGTCCTgccaaagaaattgaaaaacccGGCTTATGTTGTTTTTCGA
CAACAGTGAATCCTGGGTCTGTAAATGTCGATACGTAAAGCGATTAAAAC
AATTATTCCCCCCTATCGGgggaaaaatcttgaaaaagttAAAACCCACA
GGGATTCTCTACCTTATAGGGTGATTTCCCTGTGGACGGtaatagggaat
ttccccacaaacCGAAGCCactttagagaaccttgccctttgTATTCATG
CCAAAAATTAGAACAAacctaatgaagcaattttgcacaaagtccaaaaa
atcctatttttagccagtctcccccccccccccatttttccgttaatcag
gctccgtcacctTTTGGAagttgccattttgcatcattgtgcaaaaaatt
aggaaaaactaaatgAGCCcaagaaaagttggtaacagacgaacggacga
acattggttaatttaaaggacctcctaGGTAGGCCCAGAAAGTTGAAACG
TTTGTTTGTAAGACCCATATATGGATAAAAATTTAACTCCTCGCATTTTC
AGATGTCTTCAGATTGAGGAGcagattaaaaataattttattcgtgaaaa
aaatcaattttgatttcatattCAAAGATTCTATTCAATCCGttaaatca
atttcaattttattgataGCCAGGCACGACGCACCAGGTACggcagattt
tcacaaaaaatcccgaaattttcctcttcgtcgttaaaatcgcttaaatt
tcctcttTTGTCGTACCAGATTACAAAAGGCTTCCGCCGTGTCTGATTGT
ACTAACTGCAACTTCTTTTCTTTGTTATAATAGGGAAGTTGGAAGCCATC
TTTAAATTTATCATCACTGCTTCAGTCCATACAACTACTGGTAACAAATC
CGAACCCTGATGATCCTCTGATGGCTGACATTGTGAGTAAAGtcaacgct
ctctaatttgaacctCTGCTATATTCTAATCTTTTTGATATTGCTCCTCT
TAGCTTGAAGGTCATATAAATACTCTCCATAATCCAATTCTTTCTTTAAT
TACAAGacgcccctgtctcacagcctcgaTGAAACTCTTCCAAACAATGA
GGATGGGgttagaaattctatttttctcaGCTCCAGTGAGTATGGTTCTG
GAGTGCAAttttaccatcagattttaaagaGGATGAAACTATAGTCAATT
TCCCAGTCGGGCTTAAATTTATGGTATTTTTGCTATCGGGAACAAACTTT
TCCAGTTTAGACACATGGTTGTGTAAATTGAAAAGAATCTTCGGTCCCTT
GAAGATACAACTAAGGAAAAAAGTCAACTGTAATTCTCTTTAAAGACTGA
ATAGTGAGTGTTAGATTTTtggattcttttttatttttctaggcTCAAGA
ATTTCTAACCAACAAACGACTGTTCAACGAAAATGCAAAATCGTGGACAG
AAAAACACGCTTTGCAGAACGAAATCAAAAAGGTCAGCtttgaaattcta
aaagtgtttcattttgaataaaGTCATTGTTGATATTTTccccttgtttt
ttttttgggagtATGTAAAGTTGAATATGGGATGCAGCATTTGGTACACA
GTTATTAAAGACGGGGTCTTGGATTTCAGAAAAGGCGACATTAGAGTATA
GACTTATAGAAAAAAGCGACAATAgattagctctagtttagacggcccac
ttttcgccctgcctattctaattgtgaattaaagttggcataaagtgggc
tgtctaaagtcaatgcatagccctcttttgacgtcaatgcaatgtcttct
ttcaaccttttccaagcgaagattttaactgccaactttgtgcccactcT
CTGCCTACTCTaataattagaataggcagggcagaaagtcggccgtctaa
actagaactTATGCTTTAATCGCTCTTGAAAGTTTTAGGAAAAAGTGTTT
TGGGTTTACAGTATTACAGAAGATCCTTAAAGGACCTCCTTAGGGTACCT
CAAAAAGGCATATTTCTCCTGGTATCATTAATTAGTTTTGGCGTCTGAAA
ATCTACATCAACTAAACTTGCACCCAGCCCCTTACAGTAGCtcgtttttt
tatgattctggtAGTGCTCACGAAGGTTTTgtacgtccatcagtaaaatc
aaaaagtggtgtaAATGGCTCTGGGTACGAAGATTGCGATAATCATTGGT
TGCTGAAAAACGTAGTCCATCAtgaaaattttcgtccatgTTTGACATAG
TTTGTCAGATAAAAAGCGATGAAGTTTCGAGAATAATTGAATGACACTGT
AATATTTCTTTGATAGCCCTCTTTGACGTCCAAtgaaaacaagcgaaaac
atGATATTGAAAAAGAGGGAGACTCATCTGAAATTGATAGTAAGCGAATC
CTTCAAACAATCAATAACGAAAATGCCAGGTAG Coding sequence (CDS) from alignment at sc0000214_pilon:468073..474805+ >XLOC_041054 ID=XLOC_041054|Name=XLOC_041054|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=996bp|location=Sequence derived from alignment at sc0000214_pilon:468073..474805+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTTTTATTGTTTTAGGTATCATTATTTTGGAAGAATCACCTTACGAAAA
AGGCGTTTTCCAACTCGACATCAAACTCACCGAAAGACTTTTATTGTTTT
AGGTATCATTATTTTGGAAGAATCACCTTACGAAAAAGGCGTTTTCCAAC
TCGACATCAAACTCACCGAAAGATATCCTTTTGAACCACCGTCCGTTAAA
TTCATCACTCCAATTTACCATCCAAATGTCGACACTGCCGGAAGAATCTG
TTTGGATCTACTCAAAATGCCACCAAAAATATCCTTTTGAACCACCGTCC
GTTAAATTCATCACTCCAATTTACCATCCAAATGTCGACACTGCCGGAAG
AATCTGTTTGGATCTACTCAAAATGCCACCAAAAGGAAGTTGGAAGCCAT
CTTTAAATTTATCATCACTGCTTCAGTCCATACAACTACTGGTAACAAAT
CCGAACCCTGATGATCCTCTGATGGCTGACATTGGAAGTTGGAAGCCATC
TTTAAATTTATCATCACTGCTTCAGTCCATACAACTACTGGTAACAAATC
CGAACCCTGATGATCCTCTGATGGCTGACATTgcTCAAGAATTTCTAACC
AACAAACGACTGTTCAACGAAAATGCAAAATCGTGGACAGAAAAACACGC
TTTGCAGAACGAAATCAAAAAGgcTCAAGAATTTCTAACCAACAAACGAC
TGTTCAACGAAAATGCAAAATCGTGGACAGAAAAACACGCTTTGCAGAAC
GAAATCAAAAAGCCCTCTTTGACGTCCAAtgaaaacaagcgaaaacatGA
TATTGAAAAAGAGGGAGACTCATCTGAAATTGATAGTAAGCGAATCCTTC
AAACAATCAATAACGAAAATGCCAGGTAGCCCTCTTTGACGTCCAAtgaa
aacaagcgaaaacatGATATTGAAAAAGAGGGAGACTCATCTGAAATTGA
TAGTAAGCGAATCCTTCAAACAATCAATAACGAAAATGCCAGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000214_pilon | genome | sc0000214_pilon:468073..474805 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 478-594:6617 |
| Aaloc | 388-477:5693 |
| Aaloc | 289-387:5134 |
| Aaloc | 184-288:777 |
| Aaloc | 97-180:1 |
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