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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000214_pilon:508637..512500+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041044 ID=XLOC_041044|Name=XLOC_041044|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3864bp|location=Sequence derived from alignment at sc0000214_pilon:508637..512500+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTGGTCTTTAACATTGGAAAGGACGACAATTCTTCCGTGGTCGGA
AACTTTGATTTGGAGCACGTTCGTCTCACCCTCAATGTTGGCGTGTTTTG
GAGATAAAGTGTGCATGAAAATCCCACGACGTATGGTGTGTATCAAACAA
GTACCGTTCTACAAGAAATTAAAGACAGtatgagaaatttcaaaatcaaa
cataaatattcttaatagcgaggttaagcaagaagctatctattacgtac
ggaatctattacgtgagtttttcGCGGGCTAGCGCCCAAATCTCAAGGCT
AACTCTGTCCCGTGAAATTTGACCTGTACGTCATAGTTTGAGGAGTGGAT
CTATTGCGCGAAATTCTCCAATCTCACGTAATAGATATCGATTAGGATAT
AAGTATGATCCAGGGAAATTTACCTTACGGAGATTGGGCTGAATCGCTTA
GGATCAAAAATCAcccgaaaaaaatgtaaacagaaaagaaactttggtag
agttttttttgactttctgacAAGTTTGAGCTGAcagaagaaagtttttg
aatctcATCTGTGGAAACTATGATGCATACAAACAAAGTGAAAGAATTTA
TTGCTCAAAAGAAGGTCAAGATGTAAGTGTAATTAAATAACCTTTgctga
attttttatcaaaccaaaacaaacagaaagtttctttctggttcttttgt
ctgtttgtttttctactgttttttatctttctttttatattCTCTCAAAG
TCCAAATACATCCAAAGTAACCTTTACAATGAACAGCATgtaaccatatt
tctttttcatgttttttagtGTTTCTGTGGTGCTACCATCAAGTGTGAAG
AAGCCACAAAGTTATAATGTCAACCACACCCAAAGCAACAAACACGAAAA
AGACTGCTCTGCCAAGCTCAAATAAATTTACCCTTCCACCCGAAGCATAA
cagaagaaatctttatttattgTTCCAATTTCAACTGCTACAACTAAGCA
ACGAGATTCAATTTCTGCTCTCCATCATCAACCATATATTGTACGTACAA
ATCAGCCTGAGTAAGAACCTGATGTCACACAACCGCTGAACTTCAAACCG
TTCTCGAAAATTATATCAAGCTCTATCTTCTGGACAACCGCTACTGCTTT
AAGTTCTCAATCCTTTACTGAAAAATGTTTATTGACTGGTCATCCTCCAT
CTTCTTCGACATTATAATGTTATAACGTTCCAGAAAGTTTGGTTTGATTC
TAAAGAGACATCTCCCTTCCTAAAAAGGTGACATTGATACCTTGGAATGT
AAAGAAGCATAAGAAGGAACACCTGCCAGATATGAAACTCGAGACCTGGT
TTGCACACTTTTTTATTGGTAATGCTAATGGTGAAGCATTCATATAGAAG
TGCAGCTAAATAAGGATGACAGACTGTATACAGTGTATATACTATGCTCT
tacagattatttttttgtttataaataaagcaGTAATTTTTGATTGGTAC
CTATGTAAACTAggaatgaaattatgaaattatatatttcTATTGCAATG
TTAAGAATTCATTGAAATGATAAGTCATagtcatattttttgtttataaa
aatgttgcataaaaataataaaagtaaTACAGAGAAAACTCTTGACTATG
CTTGtctagttttaatttttgtgaaaacattTGTCTTGGGAAAAAACTTA
GTAGATTAAGATTGAAAGTAAGGGGATTTTATAGACCAGACCACCAACaa
gaaagctggaaaagaaagaaagaaaaataaaattttataagttGGGGCCG
AAAGTGAGATacggaaaaataaacattacgcCATACGTCATAGATCGCCT
TTTTGCTTAACCACttttttttCTATGCCGTGAAGCTTTAGGAATCAGGC
TAAAACGCCTCGGATCCAGTCtaaaaactcacgtaatagattccgtatgt
aatagatagcttcttgcttaacctcgctaataatgataaaaggtctaaaa
tcatttctttaagGTATCGGATATTCATTTGTATACAGGGTATACAATTA
TTTATAAGGAACCCTCAACTTGGCTTGAGTCCCTTATTTTTCCAAAGAGT
TTCAACCTCAAAGTTCCTTAGTTACTCAGCTGCTAAGATTGGATTTGCTA
TGTGTTCTGCATAAGCATTTTTTGTCTTTGTGACATATTGGACGATGTTT
CAGCAacatttttacatctttttatttAGGTTGTTGTAAATGTGTAAAAG
TTCAAGTTGGACTCTTGCTGTTCCTTGACTTCATTTCTTATTCtgagcct
gagcagttccttaactattccttatttttcagacctttttcagcctcaag
ttccttataaacttgtcccttataaaaaaacgtgtaatgtacAGGAGTAT
GCAGGAAAGGGTACTACACCGAAAAGTAAAGAAGAACAACAAAAGGGAAA
TATGGAACATATGGTAGGGATGGTAGTCTTTCATTTAATTGACCATTCAG
ATATCTAACGAATATGTTTTCCATCTGATCGGCGAATACCCTTTCGCTTT
TACAAGCAGGCTTTATTTCGGAtaagttttctgttttttttcttcttcaa
cgaATTCTAGTGTTTAATAACACTCGAGTAGTCTAAACAAATGACCAGGa
aatttcaccaaaataaaaagcGTAGGTTGCAGTGCATGCTAGGAAAAATG
GAACAAGGAGTCTTTTTCTCCTAATCACAGATCATTTAAAATGATAACTA
AGACCTAGGGggctttcaattaaaaaataatgatatcCTAACTCGAACTA
ATTATTTTGATTGGACTAAGTAATGAAAAATGTAAAGGGgatatcaaaaa
tgaaaatcttttttgaagagGAAGACTTGCGAAATCCTTCTTTATGAAAA
AGTTTGCTTTTTCCTTCAAAACTTTAATACAACAAAACGGAGCAAAAAAC
AAACACGGAGACTAGAATATCGAAAGTAGATATTATCATAATACGGCTTA
ATTTCAATCCTTCTATTAAGGTTGAACTACTGAACTCTGGCAGCTCTTTC
GGCGTATGTCGGTAGGTCTGGAAGACCGAAGACCTATAGACAGTTGTCGT
TGATTAATAAACTTGGCTTTGGTCACGAAATGGAATATATCACAATTTTC
ATTGGTTTTCCGATGGTTTTACACTTCCTTGGATTCTGTTTGTTAATAAC
AACAAAATTCAGCAACCCAACTTTTGGAACTACTCAGAAAATCTATCTTT
TGAATCTGACCATCGCTGAACTACAGACATGTGTCTTTGGCATTTTTCGG
CGAGCTTTACCGCAACATTTTCGCTTGATGTCACTGATTCAATACAGTTT
TTATTATATGATGTACGAGTCGTTAATTTTCATGTCATTAGATAGGTTTA
TGCGAATCTATTTGAGCATCAAGTTTCCGTTGTATTGGAACACAAGAAGC
ACCATTAAGCTCATCATACTAGCGTGGTGTTTCAACTGGATACTCTTCTT
TATCTTCTGGTTCCAAGATgtggaaattttcatcattgACGCCATTTTCT
TTCCGATTCTGGATATCATATTCCTCCTTGTCGCTATCCCAGCCTATTTa
tacattttcatcaaaattaagcaaaacagaaaaaagaactGCGTGAACCC
GGATATAACGAACGCCGGAAAAACCCAAAGCATACGGAAAAGACCACCGA
GGAGGCTAACGAATAGCAAACAATTTTTCGCCATCTTTTTGTTAGTAATC
ACGTTTATCATTTTCACCATCATTCCGGACTTTGTAAGTTGTTATTACTT
TCTTACTCAAACACCGATGATCATAGCGCACAATACAGCCCTCTCAGCTA
TGTATTTCACCAGT Coding sequence (CDS) from alignment at sc0000214_pilon:508637..512500+ >XLOC_041044 ID=XLOC_041044|Name=XLOC_041044|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1758bp|location=Sequence derived from alignment at sc0000214_pilon:508637..512500+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTGGTCTTTAACATTGGAAAGGACGACAATTCTTCCGTGGTCGGA
AACTTTGATTTGGAGCACGTTCGTCTCACCCTCAATGTTGGCGTGTTTTG
GAGATAAAGTGTGCATGAAAATCCCACGACGTATGGTGTGTATCAAATGT
CTTGGTCTTTAACATTGGAAAGGACGACAATTCTTCCGTGGTCGGAAACT
TTGATTTGGAGCACGTTCGTCTCACCCTCAATGTTGGCGTGTTTTGGAGA
TAAAGTGTGCATGAAAATCCCACGACGTATGGTGTGTATCAAGGAATATA
TCACAATTTTCATTGGTTTTCCGATGGTTTTACACTTCCTTGGATTCTGT
TTGTTAATAACAACAAAATTCAGCAACCCAACTTTTGGAACTACTCAGAA
AATCTATCTTTTGAATCTGACCATCGCTGAACTACAGACATGTGTCTTTG
GCATTTTTCGGCGAGCTTTACCGCAACATTTTCGCTTGATGTCACTGATT
CAATACAGTTTTTATTATATGATGTACGAGTCGTTAATTTTCATGTCATT
AGATAGGTTTATGCGAATCTATTTGAGCATCAAGTTTCCGTTGTATTGGA
ACACAAGAAGCACCATTAAGCTCATCATACTAGCGTGGTGTTTCAACTGG
ATACTCTTCTTTATCTTCTGGTTCCAAGATgtggaaattttcatcattgA
CGCCATTTTCTTTCCGATTCTGGATATCATATTCCTCCTTGTCGCTATCC
CAGCCTATTTatacattttcatcaaaattaagcaaaacagaaaaaagaac
tGCGTGAACCCGGATATAACGAACGCCGGAAAAACCCAAAGCATACGGAA
AAGACCACCGAGGAGGCTAACGAATAGCAAACAATTTTTCGCCATCTTTT
TGTTAGTAATCACGTTTATCATTTTCACCATCATTCCGGACTTTGTAAGT
TGTTATTACTTTCTTACTCAAACACCGATGATCATAGCGCACAATACAGC
CCTCTCAGCTATGTATTTCACCAGTGGAATATATCACAATTTTCATTGGT
TTTCCGATGGTTTTACACTTCCTTGGATTCTGTTTGTTAATAACAACAAA
ATTCAGCAACCCAACTTTTGGAACTACTCAGAAAATCTATCTTTTGAATC
TGACCATCGCTGAACTACAGACATGTGTCTTTGGCATTTTTCGGCGAGCT
TTACCGCAACATTTTCGCTTGATGTCACTGATTCAATACAGTTTTTATTA
TATGATGTACGAGTCGTTAATTTTCATGTCATTAGATAGGTTTATGCGAA
TCTATTTGAGCATCAAGTTTCCGTTGTATTGGAACACAAGAAGCACCATT
AAGCTCATCATACTAGCGTGGTGTTTCAACTGGATACTCTTCTTTATCTT
CTGGTTCCAAGATgtggaaattttcatcattgACGCCATTTTCTTTCCGA
TTCTGGATATCATATTCCTCCTTGTCGCTATCCCAGCCTATTTatacatt
ttcatcaaaattaagcaaaacagaaaaaagaactGCGTGAACCCGGATAT
AACGAACGCCGGAAAAACCCAAAGCATACGGAAAAGACCACCGAGGAGGC
TAACGAATAGCAAACAATTTTTCGCCATCTTTTTGTTAGTAATCACGTTT
ATCATTTTCACCATCATTCCGGACTTTGTAAGTTGTTATTACTTTCTTAC
TCAAACACCGATGATCATAGCGCACAATACAGCCCTCTCAGCTATGTATT
TCACCAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000214_pilon | genome | sc0000214_pilon:508637..512500 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 148-879:3133 |
| Aaloc | 1-144:1 |
|
