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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000359_pilon:231972..236238- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041011 ID=XLOC_041011|Name=XLOC_041011|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4267bp|location=Sequence derived from alignment at sc0000359_pilon:231972..236238- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCATACACTAAGATATTATGACCTGATTGTGAAGAATAGCAATGG
TGCAACCATCAACAAATATGTTTTACTGGAAGATAAAATAACGATCATCG
GAAGGTATATTTCTTATTAATTTATTGAATGAAACACCCAGCTGGCACAC
AACGTTGTTTTAACGTTCATATAACGTTAACATGGACGTTGTGAAAGTTA
GATAAACGTTGAAACAACGTTATATGCCACCTGGGCAGTTACTATTCAAA
TTATTGCAGTGTGAATGAAACCGTGTTGCTATCATATGTCAAATGGAATC
GAACGTGAATTTATTGCATACAAAACATAGAAAAACATAGGTTTAAATAA
AAATAATTCTCTGTTTTAGTGACGAAGATTGTGATATCATTGTCAAAGAA
TTGGCACCAAAACATGTATCTTTTGATATTGGAAAATATATCGTAAGAAA
TAGCATCCTTTTTAATCTGCATAATAATTCCTAGAATCGCATGTCTTAAA
TGTTAGTTATCTTAAGAAACACAAACTATATAAGAACATAAGGCTTTGAT
GGCCAAAATGCTAAGAACAAGTTAAGAACATTTTAGGCTTCGTAGGGCCC
TAATAAAACACCCAATTTCCTAGCAAAATTGACAAAAACACTCAAAAAAT
GGCAGAAATAAGAACATGTTAAGAATATTCAAAGGCTTCAAAAAATTTAG
ATGTTCTTATAAAAAAAACGTGTATTTGTTAATCAAACTTCAAACCTTGA
ATCGGGACTTAAAAGTTACTTTTAGCAAATAAATATTCAAAATATTTTCC
TAATTGAAAATTTTGTAATTACAGAATGCCGCAGAAAGATTGTGCAAAAC
AGATGCCTATCAGACATTTGTAAACAATGTCCCACTTGAAACAGTCATGG
CGTTAATGTTAGGTGATGTTGTTACCGTTATTGGACCGAAATGTTTATTG
CATTTTCAATTTGGTGAAAAAACAAAACTCCAAGAGCAAGAAGAAAATGA
AGCATCGGAGACCCTTCAGACTTTTGAGATGCCAAATTTAAATGAAATTT
TGGACGACACTTTTATTTCCAGAATTAGAGAAAATGACAAAGCAACATTT
GAAGGTGAGGTTTAAAAGTCGTTTATCAAGTTGAGGTGAGTTGAATGCTC
AATCATTTGATCTTTATTTACAAAATGTTGATGAGGAATGAAATTTAATT
GGAAAATACCATTAGTTTCGCAATTTAACAAATACACGGCGGGGTGTGAT
TTTATTCAGAGCGCATTTAGAGAATACAAAGACAACCACTCATTCAGGAT
CCTGAAAGGGCATCCTTGGATGAAACTTTATACAAAACACCTTTCATGAC
CCCGGAACTGAAGCTCATCACAAAACTATCTTTGAGTCTTTTGAAAAGAA
CAACGAGGATCGAAAATATTCTGCTATAGTCTTTTGCAGTTCATTGTGTT
CTTACATCTGTACAATTTTCAGTCCATTTTCAATTTTTTGTATGCATTTT
CTTTAACACGTCTTTTATCTTATTTCTAGTCGACGAGTTACCCGAAGAAT
ACATGGACGCAATTGACAATTTCGTACGAGACCATTTGGAGGAGAGAGTA
GAAAGTTTCATCGCTTTGCTTTCTCAAAAATTGATTCCTGAAGTTGTAGA
AGGAACCTTTCCAAATTGGCGCAACGATGTTATGGAGAAGAAAATTGTTA
AAGACACAGACTACGTTATCAAGCCACGAGATTTACTGTCAGTTACATAT
AATTATGCTAATGGAAATTTCTCTGAAAGCTGTATAGAACGCATCGAAGA
CAAACTCAAAGAACATTTTCCATTTATTAGAACAAAATACTGTCTTGGAG
TTCTCGTTCCAACTGTTTTGCGCTGGATCATTATTGCGACTCTTGACTTG
TCATGCGAAAAGGCTGAATTTTATTTGCAAAATGGGGGAAAAGACAACAA
GAAAGAAGCAGTGGACTCAATTAGAGCGCAAGTCGGTAAGATTGATATCA
AATTCCATAATATATGAGGGAGAATAATGTTTGTTGCTTAGTTTTCTTTA
ATAAATTTTTAGCGTGAGTGTTTAGGGGTATAAAAGTTAAATCATCTGAA
ATTACTAATTACTTCTACTAATAGACAAAATTTCTTTGAATAGCTCATAT
AACTGTCTAGGCCAAGAGCTTAAGGTACAAAAATCAATTAAGAAAAAAAC
CCTTGAATTACTCAATTTTAAGTGCATTAGATTACAAAAAATTGTAGAAG
GACACTACAGATCGATAAAAGTAAAGAACGCATCATAAGTATATTAAAAC
TTCTAATAAATACCAGGAGCCTCGAAGAACAATTTTTGGAAATAAATTCT
ATTGCATTTTCAGAAAATCGAAGAAAAGTACCTTCAAACGCAGCAACTTA
TGGAATGAATGCACAGACAGAGCAGGTAGAACCAAGGAAAACCCGAATGG
ATTGTTTGCTTCCCAACCAATCCTCCTTAGAGGTTCCCTACTAGAGATTA
TTGATCTTCTGGCTCATTATGGCTTTCTATTGACATCCGCAACTTTTGCT
TAGAAGTATCTTGGGGCTTGAAAAGTTTCAATCGATTGTGAATGGTTGCT
TTGGTACTCTAAGACCATGTTCGCACGTGACGTTCTCTTTTCACTCCAAA
CGAAATGAAGCCATTCTATTGGTTACATTCAAGTATTACGTCACTTTTAA
CCAATAGAATGGCTTGATTTCGTTTCAGAGCGAAACGGAACCGTCATATG
CCAACATGGTCTAAATATTCTTTGATTCTTTTAGGAGAGCGAAGAACCTT
CTTCATACAATCGAACTCGTCATTCAGCTGACAATCTACCACCTTCAGAT
GAAAATCAAACATCCTCGGACGAGGACGAATCAAACAAAGAGAATGAAAC
GAGTAACAATACAAAGGTATGTTACAAAAATAATTTTAGATATAATACAA
ATTCTATCTGATATTTACGACAAAACAGTAGTAGTGCTCGGTATCGTGAA
CGCATGTTAAACGTATTTTAGATATACCTTTTTAAGGTTTTCGGATACAG
TCTTTGAGCTGAAATTCTAAGTTACTTCTGCTGGCAAATGACTTACTGAC
ACGACTAAAACATATTACTCAAAACGGAACATTGGCATGTGAAAATGGTA
ACAGTTACCGCAAATTTTAATAATATACTGTGTCAACCATCGTTTTTTTA
TGTTTGAAAACCATGGCAGACTAGCAAATCTCGACAATCCTACATATTAA
TTATATCATTATACAAGCATAATCAAGCTATAAGGTTTGTTGATATACTT
TATAATAACTTATCCGTAATTTGTCATTGTTATTTCAGGAGATGGAAATA
GGACAACCTTCTGCAACAAAAGCAACATTAACAGTAGAAGTAGAAGAAAA
CAAAGCTAAACAGGTATTTAACAGTTGAAATTTTAAAATGTTTGGGCTAC
TCATAGTCAGCGGATGGCTTTTTGGCACAACACAAATGTAGCATACCAAT
AGTATTTTATAACCAAAAATGGCCGTGCTATTGGTTAGAATAGACTAAAG
CCCTTTAATTATCAATTAGGACAATACATCGATAGAAAACCGTTTTAGCG
TCCGAGCGGGAAATAGAAAAAGAATCGCATCGTGGACTATACTTGAAAAA
CTTTCTCCAGTGACTTTCTCTGCCTGGATTGCATATTTTCATTATCGTTT
ACTAAAGATGACTTACTGTAAACGTCTCTACGATACCTTACAAAGAATAT
ATTAAATGACGTTTTGTTTTAGAAAAGAACCGAATACGCGTGTCCTGAAT
GCGGAGTGACAACCCAAGGACTTCCACGTCACATGAGACTCAAACACAAA
TGGAACAATGCAAAAGCAGCAAAGGTTGTCACGCTAACCGGCCAGCGAAA
GACATACACGCAAACCAAAAAACTCGTTCCAAAGAATCAAGATTACCATA
AGGAAAAAAGGTGTCCGATGGAAAGATGCTATTTTGTAGGTCTTGATGTT
GGACGGCACCTTCGCAATGATCACCTGATGAGTATAAATGACGATAATTA
CAAAGATGCTCTCAAAGCGGCCCGATTACATGAACCGTTGACGCATGAAA
ATATTCAAAAACGTCGGAAAGCAGCAGCACGGGACTTCCAACTGGAAAAA
GATATCGAATGCTACGAAAATTCGGTAAATTCGGTAAATATGGACATTAA
CGAACCTACAGAAACTAATGCCACACCAATAGACGACTCGTTGGAAACAA
TTGAAACAGTTATGTCA Coding sequence (CDS) from alignment at sc0000359_pilon:231972..236238- >XLOC_041011 ID=XLOC_041011|Name=XLOC_041011|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3354bp|location=Sequence derived from alignment at sc0000359_pilon:231972..236238- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCATACACTAAGATATTATGACCTGATTGTGAAGAATAGCAATGG
TGCAACCATCAACAAATATGTTTTACTGGAAGATAAAATAACGATCATCG
GAAGATGGCTCATACACTAAGATATTATGACCTGATTGTGAAGAATAGCA
ATGGTGCAACCATCAACAAATATGTTTTACTGGAAGATAAAATAACGATC
ATCGGAAGTGACGAAGATTGTGATATCATTGTCAAAGAATTGGCACCAAA
ACATGTATCTTTTGATATTGGAAAATATATCTGACGAAGATTGTGATATC
ATTGTCAAAGAATTGGCACCAAAACATGTATCTTTTGATATTGGAAAATA
TATCAATGCCGCAGAAAGATTGTGCAAAACAGATGCCTATCAGACATTTG
TAAACAATGTCCCACTTGAAACAGTCATGGCGTTAATGTTAGGTGATGTT
GTTACCGTTATTGGACCGAAATGTTTATTGCATTTTCAATTTGGTGAAAA
AACAAAACTCCAAGAGCAAGAAGAAAATGAAGCATCGGAGACCCTTCAGA
CTTTTGAGATGCCAAATTTAAATGAAATTTTGGACGACACTTTTATTTCC
AGAATTAGAGAAAATGACAAAGCAACATTTGAAGAATGCCGCAGAAAGAT
TGTGCAAAACAGATGCCTATCAGACATTTGTAAACAATGTCCCACTTGAA
ACAGTCATGGCGTTAATGTTAGGTGATGTTGTTACCGTTATTGGACCGAA
ATGTTTATTGCATTTTCAATTTGGTGAAAAAACAAAACTCCAAGAGCAAG
AAGAAAATGAAGCATCGGAGACCCTTCAGACTTTTGAGATGCCAAATTTA
AATGAAATTTTGGACGACACTTTTATTTCCAGAATTAGAGAAAATGACAA
AGCAACATTTGAAGTCGACGAGTTACCCGAAGAATACATGGACGCAATTG
ACAATTTCGTACGAGACCATTTGGAGGAGAGAGTAGAAAGTTTCATCGCT
TTGCTTTCTCAAAAATTGATTCCTGAAGTTGTAGAAGGAACCTTTCCAAA
TTGGCGCAACGATGTTATGGAGAAGAAAATTGTTAAAGACACAGACTACG
TTATCAAGCCACGAGATTTACTGTCAGTTACATATAATTATGCTAATGGA
AATTTCTCTGAAAGCTGTATAGAACGCATCGAAGACAAACTCAAAGAACA
TTTTCCATTTATTAGAACAAAATACTGTCTTGGAGTTCTCGTTCCAACTG
TTTTGCGCTGGATCATTATTGCGACTCTTGACTTGTCATGCGAAAAGGCT
GAATTTTATTTGCAAAATGGGGGAAAAGACAACAAGAAAGAAGCAGTGGA
CTCAATTAGAGCGCAAGTCGTCGACGAGTTACCCGAAGAATACATGGACG
CAATTGACAATTTCGTACGAGACCATTTGGAGGAGAGAGTAGAAAGTTTC
ATCGCTTTGCTTTCTCAAAAATTGATTCCTGAAGTTGTAGAAGGAACCTT
TCCAAATTGGCGCAACGATGTTATGGAGAAGAAAATTGTTAAAGACACAG
ACTACGTTATCAAGCCACGAGATTTACTGTCAGTTACATATAATTATGCT
AATGGAAATTTCTCTGAAAGCTGTATAGAACGCATCGAAGACAAACTCAA
AGAACATTTTCCATTTATTAGAACAAAATACTGTCTTGGAGTTCTCGTTC
CAACTGTTTTGCGCTGGATCATTATTGCGACTCTTGACTTGTCATGCGAA
AAGGCTGAATTTTATTTGCAAAATGGGGGAAAAGACAACAAGAAAGAAGC
AGTGGACTCAATTAGAGCGCAAGTCGAAAATCGAAGAAAAGTACCTTCAA
ACGCAGCAACTTATGGAATGAATGCACAGACAGAGCAGAAAATCGAAGAA
AAGTACCTTCAAACGCAGCAACTTATGGAATGAATGCACAGACAGAGCAG
GAGAGCGAAGAACCTTCTTCATACAATCGAACTCGTCATTCAGCTGACAA
TCTACCACCTTCAGATGAAAATCAAACATCCTCGGACGAGGACGAATCAA
ACAAAGAGAATGAAACGAGTAACAATACAAAGGAGAGCGAAGAACCTTCT
TCATACAATCGAACTCGTCATTCAGCTGACAATCTACCACCTTCAGATGA
AAATCAAACATCCTCGGACGAGGACGAATCAAACAAAGAGAATGAAACGA
GTAACAATACAAAGGAGATGGAAATAGGACAACCTTCTGCAACAAAAGCA
ACATTAACAGTAGAAGTAGAAGAAAACAAAGCTAAACAGGAGATGGAAAT
AGGACAACCTTCTGCAACAAAAGCAACATTAACAGTAGAAGTAGAAGAAA
ACAAAGCTAAACAGAAAAGAACCGAATACGCGTGTCCTGAATGCGGAGTG
ACAACCCAAGGACTTCCACGTCACATGAGACTCAAACACAAATGGAACAA
TGCAAAAGCAGCAAAGGTTGTCACGCTAACCGGCCAGCGAAAGACATACA
CGCAAACCAAAAAACTCGTTCCAAAGAATCAAGATTACCATAAGGAAAAA
AGGTGTCCGATGGAAAGATGCTATTTTGTAGGTCTTGATGTTGGACGGCA
CCTTCGCAATGATCACCTGATGAGTATAAATGACGATAATTACAAAGATG
CTCTCAAAGCGGCCCGATTACATGAACCGTTGACGCATGAAAATATTCAA
AAACGTCGGAAAGCAGCAGCACGGGACTTCCAACTGGAAAAAGATATCGA
ATGCTACGAAAATTCGGTAAATTCGGTAAATATGGACATTAACGAACCTA
CAGAAACTAATGCCACACCAATAGACGACTCGTTGGAAACAATTGAAACA
GTTATGTCAAAAAGAACCGAATACGCGTGTCCTGAATGCGGAGTGACAAC
CCAAGGACTTCCACGTCACATGAGACTCAAACACAAATGGAACAATGCAA
AAGCAGCAAAGGTTGTCACGCTAACCGGCCAGCGAAAGACATACACGCAA
ACCAAAAAACTCGTTCCAAAGAATCAAGATTACCATAAGGAAAAAAGGTG
TCCGATGGAAAGATGCTATTTTGTAGGTCTTGATGTTGGACGGCACCTTC
GCAATGATCACCTGATGAGTATAAATGACGATAATTACAAAGATGCTCTC
AAAGCGGCCCGATTACATGAACCGTTGACGCATGAAAATATTCAAAAACG
TCGGAAAGCAGCAGCACGGGACTTCCAACTGGAAAAAGATATCGAATGCT
ACGAAAATTCGGTAAATTCGGTAAATATGGACATTAACGAACCTACAGAA
ACTAATGCCACACCAATAGACGACTCGTTGGAAACAATTGAAACAGTTAT
GTCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000359_pilon | genome | sc0000359_pilon:231972..236238 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1183-1677:496 |
| Aaloc | 1108-1182:930 |
| Aaloc | 976-1107:1484 |
| Aaloc | 916-975:1903 |
| Aaloc | 460-912:2737 |
| Aaloc | 178-456:3444 |
| Aaloc | 106-177:3898 |
| Aaloc | 1-102:4268 |
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