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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000016_pilon:2408473..2410084- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041003 ID=XLOC_041003|Name=XLOC_041003|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1612bp|location=Sequence derived from alignment at sc0000016_pilon:2408473..2410084- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCATACATCATCATTCCTTGACACGGATGACATCATCTCACCGGA
AACCAAACCGCCGCGTGCTCCAAAATGCGCACGCTGCCGCAACCACGGTG
TGGTATCGTGGCTCAAAGGTCATAAGCGGTTCTGTAAATGGAAGGATTGT
CCGTGTAGCAAATGTGTTCTGATTACTGAACGGCAACGTGTGATGGCCGC
TCAAGTGGCATTGAGACGACAGCAAGCTCAAGAAGAAAATAACCAAGATG
CAAAATTAAAAATCAATTATAAAAGCTTTCATAGGAGTGAAAGTGAAGAT
GGAAGCCAACCTGTTGTCCGTGGTGGTCAAAGTAAGATGTCTTATCATAT
TGCCAATTCAATTACAGAGGAGTCTCTTCGTCTCTTTAACTCGAACCTCT
ATTACTCGAATGTCTCCGTAATTCGAACTAGTTTTATGGTCCCTTTAGTT
AACAATGTCTTATAAACCTTACTCCATAAGTCGAAAGTTCCTTAACTCGA
ACAAACTTGTATTCCCCGTGCGTGCTCAAGTTATGGAGACTCCAATGTAC
TTAAGGTTTCAAATCGGATGCCCTGCATGTAGTTCTATTACGGTAATTTA
TGTTTGCACCAATAATTAAATAAGTTCAAAATAATGAGAATAGTTTCCAC
GGATATATTATTGAATCAGATTTCTGACAGACGAGAAAGTTCGTGATTAA
AATTTTAAACAGTTTTAAAGCACCACTTTAAAATCGTGAATACAACGACG
GTTTAGAACGAATTGAGGTAGTGCTAGAATCGTCTTTTACTCAAAATCCA
AACAAATTTACACATAACTTAAGGGTATAACATTATTCTATGTAGGACAT
GACTCCTCGTCGGACAATATGAGTACATCTACCACATCTTCTTCATTACA
ATCACCAAAACACTCTCCCAACCCCATCATCAACCGCCAACCATCAGTTA
CAGAACAACCTGAAAACAACGATGTTGACAATAACCAACCAATCACAAAC
AAATCATCCTCAAAAACAATCAAATCTACACGCAGTGCTTTTAACACGTG
TTCAAACTCCAATAACAATAAATCTCGTTATCAGGCCTCCAAAAAAGATC
CATTCGAAGTGATCACTAAAATATTCCCTGATTTTGATTCGTACACACTT
GCAGAAACTCTACAAAATTGTCATGGCAACATATACCTTGCAGTTGAAGC
TCTAGTTGCGCTCAAAGATAAAACCAGAGTTGGCGTCCTTCCGCCTAGGG
TGTACCACCCAGTATATCTACCGCACCCTTACAGGCACCAGGTACCACCT
TATGAAAGATATCCGTACAAACCACCAAATTATATACCACACCCGGCATA
TTTTCGGACTTCTGCAAAACCTCCTCATACATCATGCACAGATATTGACT
GTTCTTGTTACAAGCACCATATCAAAGATAAGAAACAATCTTATCTTGAG
ACAAGGAAACGTTCCTTAGATGCTTTAATGATGTCGCCGAAACTTCGGGA
TGCTCACGCCGATTATCTGACGTATCTCAAGTCCGTCAAAGAACTTAAGA
GAATTGAGAAAAGTAACCCAGTTTTGTATGTTAATGGTAAAAAACCTGTA
ACTGCAATGTAA Coding sequence (CDS) from alignment at sc0000016_pilon:2408473..2410084- >XLOC_041003 ID=XLOC_041003|Name=XLOC_041003|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2196bp|location=Sequence derived from alignment at sc0000016_pilon:2408473..2410084- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCATACATCATCATTCCTTGACACGGATGACATCATCTCACCGGA
AACCAAACCGCCGCGTGCTCCAAAATGCGCACGCTGCCGCAACCACGGTG
TGGTATCGTGGCTCAAAGGTCATAAGCGGTTCTGTAAATGGAAGGATTGT
CCGTGTAGCAAATGTGTTCTGATTACTGAACGGCAACGTGTGATGGCCGC
TCAAGTGGCATTGAGACGACAGCAAGCTCAAGAAGAAAATAACCAAGATG
CAAAATTAAAAATCAATTATAAAAGCTTTCATAGGAGTGAAAGTGAAGAT
GGAAGCCAACCTGTTGTCCGTGGTGGTCAAAATGGATCATACATCATCAT
TCCTTGACACGGATGACATCATCTCACCGGAAACCAAACCGCCGCGTGCT
CCAAAATGCGCACGCTGCCGCAACCACGGTGTGGTATCGTGGCTCAAAGG
TCATAAGCGGTTCTGTAAATGGAAGGATTGTCCGTGTAGCAAATGTGTTC
TGATTACTGAACGGCAACGTGTGATGGCCGCTCAAGTGGCATTGAGACGA
CAGCAAGCTCAAGAAGAAAATAACCAAGATGCAAAATTAAAAATCAATTA
TAAAAGCTTTCATAGGAGTGAAAGTGAAGATGGAAGCCAACCTGTTGTCC
GTGGTGGTCAAAGACATGACTCCTCGTCGGACAATATGAGTACATCTACC
ACATCTTCTTCATTACAATCACCAAAACACTCTCCCAACCCCATCATCAA
CCGCCAACCATCAGTTACAGAACAACCTGAAAACAACGATGTTGACAATA
ACCAACCAATCACAAACAAATCATCCTCAAAAACAATCAAATCTACACGC
AGTGCTTTTAACACGTGTTCAAACTCCAATAACAATAAATCTCGTTATCA
GGCCTCCAAAAAAGATCCATTCGAAGTGATCACTAAAATATTCCCTGATT
TTGATTCGTACACACTTGCAGAAACTCTACAAAATTGTCATGGCAACATA
TACCTTGCAGTTGAAGCTCTAGTTGCGCTCAAAGATAAAACCAGAGTTGG
CGTCCTTCCGCCTAGGGTGTACCACCCAGTATATCTACCGCACCCTTACA
GGCACCAGGTACCACCTTATGAAAGATATCCGTACAAACCACCAAATTAT
ATACCACACCCGGCATATTTTCGGACTTCTGCAAAACCTCCTCATACATC
ATGCACAGATATTGACTGTTCTTGTTACAAGCACCATATCAAAGATAAGA
AACAATCTTATCTTGAGACAAGGAAACGTTCCTTAGATGCTTTAATGATG
TCGCCGAAACTTCGGGATGCTCACGCCGATTATCTGACGTATCTCAAGTC
CGTCAAAGAACTTAAGAGAATTGAGAAAAGTAACCCAGTTTTGTATGTTA
ATGGTAAAAAACCTGTAACTGCAATGTAAGACATGACTCCTCGTCGGACA
ATATGAGTACATCTACCACATCTTCTTCATTACAATCACCAAAACACTCT
CCCAACCCCATCATCAACCGCCAACCATCAGTTACAGAACAACCTGAAAA
CAACGATGTTGACAATAACCAACCAATCACAAACAAATCATCCTCAAAAA
CAATCAAATCTACACGCAGTGCTTTTAACACGTGTTCAAACTCCAATAAC
AATAAATCTCGTTATCAGGCCTCCAAAAAAGATCCATTCGAAGTGATCAC
TAAAATATTCCCTGATTTTGATTCGTACACACTTGCAGAAACTCTACAAA
ATTGTCATGGCAACATATACCTTGCAGTTGAAGCTCTAGTTGCGCTCAAA
GATAAAACCAGAGTTGGCGTCCTTCCGCCTAGGGTGTACCACCCAGTATA
TCTACCGCACCCTTACAGGCACCAGGTACCACCTTATGAAAGATATCCGT
ACAAACCACCAAATTATATACCACACCCGGCATATTTTCGGACTTCTGCA
AAACCTCCTCATACATCATGCACAGATATTGACTGTTCTTGTTACAAGCA
CCATATCAAAGATAAGAAACAATCTTATCTTGAGACAAGGAAACGTTCCT
TAGATGCTTTAATGATGTCGCCGAAACTTCGGGATGCTCACGCCGATTAT
CTGACGTATCTCAAGTCCGTCAAAGAACTTAAGAGAATTGAGAAAAGTAA
CCCAGTTTTGTATGTTAATGGTAAAAAACCTGTAACTGCAATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000016_pilon | genome | sc0000016_pilon:2408473..2410084 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 334-1098:766 |
| Aaloc | 1-330:1613 |
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