|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000016_pilon:2104256..2108283- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040992 ID=XLOC_040992|Name=XLOC_040992|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4028bp|location=Sequence derived from alignment at sc0000016_pilon:2104256..2108283- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATAGTTTGATTATTCTAGTGGCGTTCATGGCTCTCCATAAAAATTG
TCTGGTATTTTGTGGTAAGGATATATATCTACTTTTGCGAGCAGTAGCGT
GGTGGCAGGGGGCAGTGCCCCCCAACGGCCGATTCTTTTGAGGTGCGCCG
AAATACAAAGGGCACTAAAAGACGCCTTTGATTACTATTCTTTTCATACG
GGGCGCCAAACTCAAAATTTTCCAAAATTACCCCCCCCCCCAGTTTGCCC
CGAATTTTAGTCGACCCACCACGCTACTGTTTGCGAGCGTTAATATTTCT
CTCACGTTCATCTCCACACATCAATCAGTTACGTTAATTTCGAACTCATT
AACACTTTGACCTCCTGATCCCATCATTGCTATTTAATATGTATCGGTAT
TAAAAGAACTGATTTCTCACTTTTCTTCATAGCTTCACAAAAAAACTATT
GACGAAATGGTAAAAATGTTAAGATTAGAATTAGAGCTGTACAGTCAACT
GTCTCTCTCTAATTCGAACGTTTAGTTCAAACTAAAACTCCGGTACCATT
AAAGTATTCCCTTTAATTCGAATTTTTCTCTAACCTGACAGAGATTCTCT
GTCCCTTGAAAATCGGATTAGAGAGAGTCAATTGTATATAGTTGACTCTC
TCAAACTCGATCTTCAAGGGACCAAAAGTTTGATTCGAATTAGAGAAAGA
TTCGAATTACAGAGTGTGAAATAAACCAGTTTCTAGCTGAGGGGACCAAT
ACTTCAGTTCGAATTACAGAAACATTCGAATAGTAGAGGTTCGAATTAGA
GAGAGTTGACTGTATGTTTTTTTTCTAAATCTTGCATTTGGCAAACCTCG
AACAGTTTTTTTCCGCGTTACAAACACTTTCACACAAAGATGATGGCAGG
TGTAAATTTCAATCAAGGCTATCATTATTTTTTTTTAGAATCTTGCATTC
TGGAGACCGTAAACCGTGTTTTTCGAGCCACAAGCTCTTACGCTTTTCTT
AGACACATCAAGACTGAACAAGAATGTATCAATACATGTATGAAAGATGA
AAATTGTGATTATGTCGGTTGGTTCTTCAACAATTCATATGGTACAAGGG
CAATGTTTTATATAATTTCTTTAGTTTCTCAATAATTTCACATTTTGAAG
GTCTGATAATGATATTTTTGCTACATAATTTTACAAATTCAAGTGAAGTA
TCATTTTCAATCAATATTCTGACATTCTGAGACTGTTTATGTTTTAACTT
GCAAAATTACTTCAAATTACTTGGTAAGCGAATCGATATTGAACATAGCT
ACCTATCTATATTACGATTCATTTTTATAGTTTTGGTGAAATTCCTTCTT
TTCACATTTAAGGTGAATGGCATTGCTTGTTGAACAATGTAAACTTTGGT
GAACCACCTATAACTTATCCTTGGCTTGGTGCCACCGTGTATAAGTGTAG
AGGTATTTGTTTTTAATGGTCTTTGACAAAAAACCCATTTTCCATTATTT
CTCTAATCCCAAGGGATTGATTGGTGATATGATTCGAATGGTCATCAAAA
TATCAAAACAATCATTTGATAACTTTTATATGTATTGAGAGGAAAAAGGA
AAGATTTCCGAGATTAAAAATTCGGAATAAAATTTTACAAAATATTATCT
CTCACTTACAAGAGCCCTCGTGGTCTCGAATTTTTACAGCGTTTATATAC
GCCTTTTTATCCAATCAGATTGCTCATATTTGTCATGTTGACAATGATGT
ATAATATCTGAGAAAGGTAGACCAGTACCCCTTACTGAATGGATGACAAT
TTTATTTTTATTATGCAGGAAGCTGTCAGTACGAAAGAAAAAGCTATAAA
CCTGGTGATACATTTTACACGGATGATTGTAAACAGATGTGCCAGTGCCG
ATTAGATGGAGTGAAATGCTCTCCATTCACATGTCCACCTAGTAGAAAAG
CACTATCAAAAATTTGTTTTGTTAAGGTGCTGATCAACTATACGTCACCC
ATTGATGCATCATTCAAATGTTCATGTTCGATTTTCAGGTGCGCCGCTCC
AGGTACTAATTTATAAAATAACGCACTAAAAATAATTATTATATACATGT
AGGTGAAAACAGCCATTGAATAATTCCTGATATACCATGGGTATTATACC
ACGGTAGAATTTTTTTTCATGCTCTTGTTGTTTATCAAAGAAATATATTA
AAATAAATGTATTGTCGATTACATGAACAAATTTTATGACTCGAAGTAAT
TAAGAAAATCATTAAAAAAGAAAAACATTCGAACGTTCCATTATGGGAGT
ATTTTATGTGAATCTTTCGACTATTTATATAATGTTTTGTTTTTGCCTCG
AGGTATATAATAAAACATATTCGTATATACGCTAATTTCATAGTCTGTCT
GTACCGTAAAAACATAAGCTGATCCACGCTCATTCTTCTTCCATACGCAA
TACACGGGTTTCGAATTAAATTTTTGCTTAGCTTTAGCTTTGATCCCATG
TAAATTTGCACGAAAAATATCAAGTAAACAGAACGAAAATTGGCCGTGTA
TCAAGCAATTTTAGCTCATTTTTCCATTTTGACAGACTTTATGGGTCATT
ATGAAAACAAAAAACATTAAAATAAAAAGTCAATCGTTTAATCATATTTC
TTTTATTGAATTTAAAATAGAAAAACATCTTTTGAATGAACACCTGGCTT
TCAAAAGAGAAGAAAGGAAATCTATCAACCTTTTATAAGGCATTTTCCCT
TATCGCTCCTTTTATTTACTTGATTTTTTCTCTCGCGCCAGATTTAATTC
GAAACCCGTGTATTCTTTTCAAATTGACTCGAAGGGTTATTAAAATAACA
CGTTAAAACCCTTAAATTGTCATACGCAACGTTAATTTTTCCTAATATCT
CATTGATTCGATTCGCTCACTTAAGTCTCGATATTTTTGCAAACAATGAA
TTTGTTTCTTACCTCCAGAACGCAAATACATAAACGCTAATCCTAGCTCA
ACATCACACATCCATTGTGAACAATCTACCCTTTCGTGGACATTCAACAA
TTCGGACATTACGTCATTTTCGGACAGTAAATATGGCCGTAATTTGACTA
CTCTGTTCATTCATGATGTAAATGAGAACGATGAAGGTGATTATCGATGT
GGCAGTGATTTGAATGTTTATCAACTTGTGATTGTAAAGCAAAAAGGTAT
GTTATACAGTTTCTAATGATACCATTGTGTGTTTGTGTACTCTGTACCAG
AGTGTATCTCACGTTTATCGCTTCGTAGTACACTCTGTGCGCAATATCTG
CTTGATTAAAAAATTTCCGTATAGCTTCACTTCTCTCATCGTCTCCCCTC
TTCCACCAACACTCCATTGCAGCGATCGGTTTGAGAAAAGACAATGACAA
CAGACCCTCTACGGCAATGAATTTTGAAATTAGCCGTAGATACTGGGTCT
ATGTACAGACAAGTGTTTGTGCCACAGAGGTCAAAAATAAGTTTGGAAAA
GGGCTATCAAAATGCATCTCTTGGGAAAATACACTGATCTTTTATCCTTA
CGGGGAAAAGCACAATATGTTGTAAATCCTCACTAAGGTTTAGAACTTGA
AATCTCAACCCGTAATCTGACTACTCTCTGAGCAGATTCTGATACTTTGG
GCATGGCACGTATTCACTCTAAAAGGCTATGGTTCCGTAAGAGTCGCAAT
CGCCAAATCCATTCAGAGTGGAGCGTGGTATGTACAGAATGAATGATCTG
TTATGAGATTAGAGATTTAGTGGAATTCCTAATGTTTTTTGGCACAATAT
GACAAAATGAAATACCCCTTATTGTCCATTACAACCCGTCTTGGTAGCAT
TTTCAATCTGTCCAGAAAGTGGCGATCATTCATCTAATTGTCACTTACTG
TTTTACTTTCAGAGCCATCAACACAATATAGCATGACAAGCAACGGTAAT
CAAAACCATTCTAATCATTTGATGCTCTTATGGTCGATGCTGTTCATAAT
CATTGTATTATTTCCACACAGGTATTAG Coding sequence (CDS) from alignment at sc0000016_pilon:2104256..2108283- >XLOC_040992 ID=XLOC_040992|Name=XLOC_040992|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1770bp|location=Sequence derived from alignment at sc0000016_pilon:2104256..2108283- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATAGTTTGATTATTCTAGTGGCGTTCATGGCTCTCCATAAAAATTG
TCTGGTATTTTGTGATGCATAGTTTGATTATTCTAGTGGCGTTCATGGCT
CTCCATAAAAATTGTCTGGTATTTTGTGAATCTTGCATTCTGGAGACCGT
AAACCGTGTTTTTCGAGCCACAAGCTCTTACGCTTTTCTTAGACACATCA
AGACTGAACAAGAATGTATCAATACATGTATGAAAGATGAAAATTGTGAT
TATGTCGGTTGGTTCTTCAACAATTCATATGAATCTTGCATTCTGGAGAC
CGTAAACCGTGTTTTTCGAGCCACAAGCTCTTACGCTTTTCTTAGACACA
TCAAGACTGAACAAGAATGTATCAATACATGTATGAAAGATGAAAATTGT
GATTATGTCGGTTGGTTCTTCAACAATTCATATGGTGAATGGCATTGCTT
GTTGAACAATGTAAACTTTGGTGAACCACCTATAACTTATCCTTGGCTTG
GTGCCACCGTGTATAAGTGTAGAGGTGAATGGCATTGCTTGTTGAACAAT
GTAAACTTTGGTGAACCACCTATAACTTATCCTTGGCTTGGTGCCACCGT
GTATAAGTGTAGAGGAAGCTGTCAGTACGAAAGAAAAAGCTATAAACCTG
GTGATACATTTTACACGGATGATTGTAAACAGATGTGCCAGTGCCGATTA
GATGGAGTGAAATGCTCTCCATTCACATGTCCACCTAGTAGAAAAGCACT
ATCAAAAATTTGTTTTGTTAAGGTGCTGATCAACTATACGTCACCCATTG
ATGCATCATTCAAATGTTCATGTTCGATTTTCAGGTGCGCCGCTCCAGGA
AGCTGTCAGTACGAAAGAAAAAGCTATAAACCTGGTGATACATTTTACAC
GGATGATTGTAAACAGATGTGCCAGTGCCGATTAGATGGAGTGAAATGCT
CTCCATTCACATGTCCACCTAGTAGAAAAGCACTATCAAAAATTTGTTTT
GTTAAGGTGCTGATCAACTATACGTCACCCATTGATGCATCATTCAAATG
TTCATGTTCGATTTTCAGGTGCGCCGCTCCAGAACGCAAATACATAAACG
CTAATCCTAGCTCAACATCACACATCCATTGTGAACAATCTACCCTTTCG
TGGACATTCAACAATTCGGACATTACGTCATTTTCGGACAGTAAATATGG
CCGTAATTTGACTACTCTGTTCATTCATGATGTAAATGAGAACGATGAAG
GTGATTATCGATGTGGCAGTGATTTGAATGTTTATCAACTTGTGATTGTA
AAGCAAAAAGAACGCAAATACATAAACGCTAATCCTAGCTCAACATCACA
CATCCATTGTGAACAATCTACCCTTTCGTGGACATTCAACAATTCGGACA
TTACGTCATTTTCGGACAGTAAATATGGCCGTAATTTGACTACTCTGTTC
ATTCATGATGTAAATGAGAACGATGAAGGTGATTATCGATGTGGCAGTGA
TTTGAATGTTTATCAACTTGTGATTGTAAAGCAAAAAGAGCCATCAACAC
AATATAGCATGACAAGCAACGGTAATCAAAACCATTCTAATCATTTGATG
CTCTTATGGTCGATGCTGTTCATAATCATTGTATTATTTCCACACAGGTA
TTAGAGCCATCAACACAATATAGCATGACAAGCAACGGTAATCAAAACCA
TTCTAATCATTTGATGCTCTTATGGTCGATGCTGTTCATAATCATTGTAT
TATTTCCACACAGGTATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000016_pilon | genome | sc0000016_pilon:2104256..2108283 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 772-885:115 |
| Aaloc | 544-768:1059 |
| Aaloc | 310-540:2209 |
| Aaloc | 220-306:2665 |
| Aaloc | 67-216:3089 |
| Aaloc | 1-63:4029 |
|
