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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000024_pilon:1971702..1974507- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040985 ID=XLOC_040985|Name=XLOC_040985|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2806bp|location=Sequence derived from alignment at sc0000024_pilon:1971702..1974507- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAACAGTTCTGATGTAGATTCAAATGATAATGAAACTTTCAAAGA
AGAAGAAGGAACAACAAACGAAAGTGAGCCAGATGAAGTTCCATCACAAG
CAATAAATCTGAACAATCCAAAGGCAATGAAGAAACTATTACAAATGTCT
ACTCCAAGCCCACAAGAGCTTGACCCAGATGAAGAATATTGTTTTGAATC
AAGTACACTTTATGAAGATAAAAATGCGTTCATTTCAAAGCTTATTGAGA
AGATCAAAGAAAACCCATGTTTGTACGACCATTCAACCTTTGGGTGGCGC
TACCCTGAAAACAAAAAAGAAGTTTGGGAGAGAATTGGGAAAGAGCTTCA
AGTTGAGCACAGTGAGTTTTAATGATGATATAATATAAAATTATCCTTGA
TTTTATTTACTGTATGACACTCAATTACATTTTATTTTTACAATTTTATT
TTATTTTTAAGGAAGTGTACAGTACGGTGAAGGCTTCTTCGTAAAAGCGA
AAGACATGTATCTATTTTTGGATCCGGCATGCGGGAATAGTGTCAGGACC
TGCAGGCGACCTGGTAGGGTTGGGTATGGGTGTGGTTTGGGTGTGGTTAC
GTATCAGATTGGCTAAGAATTTGGTTATTATCAGTTAGGGTTAGGGTTGG
AGCTCAAAACAAGCACTCTTTTGTGATTTTCTCTAAATATAGTCTGGTCT
GCAGTTTGTATATACAATATAAATAGCCGTCAGAAACACTATCTCGGCAT
GAATCCGTGGCGCAGTGGATAAGGCATTGGGTTTCAAATCATCGGAACTT
TGCATTTAGTGGGTTCGAATCCCACCGGTGGCGATCTGTCGGTAAGTCAT
TCAGTAAGTTAGAAAACATAGAAAATAACTCACATAACCAGAAAGTCAGG
AAAACTACGAACAAGAGACTGGAAAGTACGAAATAAGTCCAGATCTGTCT
TTCGTCTTTACGAAGAAGCCACGACCGTACAGTACAGACTATGTGCAAAC
TTAAAAAGGTCATTTTGTTTTGCATGAGATTTCCATTTCTGCACTAAGAT
TCCTCTGCCACTTTTCTACCGAGAAAAGACCCATGGTGGCCAGCAACCCT
TGAGATCCTTAAAATCCTTGAAACGTCCTTGATTTTATTTCTACCCTTGA
AAATTTCCTTGAAAACCTTGAAAATATGATGATTTTCAGTAGACCCTTGA
GCTACCATAAGTTAGTCTAATGTTGACATCCCTCTTCTAATTCCGACACC
CTTCTTTAGAGATAGGAATAATAGAAAGGTCAGAATCACTGATAGAAAAA
AGATTTATCCCTCTCTGATTGCTAAGCAAAAAAATTGGTTTCAATCAGCG
ATTTCGACCTTCCTATTATCAATTTCTATGGGGGACCGTTTCTATCTCCA
AAGAAAGTGTCGAAATTAGAAGAGGGATGTCGACATTAGACCAACTTACA
GTATGAAATTTAGAGCCTTGAAACCCTTGAAATTCAGAAACCTGGAAAAG
ATTTCAGTTCATTACTAAGAACCTTTCAAATGCAAAATTTTCCCCACTTT
GTGGGGATAAAAGTATATAAGCCTACAAGGAAATCAAGCTATAAAGAAAG
CTAGAAAATAAACTAACGCTATTGTTTTGGACAGATGCACGGTGACAGGA
GGGGTCAGGGGTGCCAAGGCTTCCCAGCGGAGCTTTTTCGAGGGGGCCAA
ATTTTAGGAAAATCCTAGCTTAGACAGCGCTTTGAAACGTGAAAAGGCGC
TCATTTATAAAGAAAATTGCAAACTTTATTAAATTATTTTTAGAAAAATG
TGACAAGTGCGGGATGGGAATCTAATGCAAAACGACGTTAGTAAGGATGT
CATGTTGAATAATTAAAAATTCCAACATCAAAACAATGATAATAAATAAG
TGTACGCTGTAATAATCATACACTAATGTGTCATTGTTTCAATGCTGGAC
ATCCTGACTAGCAAAATGTCTATGCTCACGATTTAGTCCCTTTTTTTAAT
TTTTAACTAAGATCTCCAATTTTATTTTCTCAATCTCTTTTATTTTAGTA
ACCCTAGAAAAAGAATTCAAGAAATTGAAAGATAATTACCGTAAATGCTT
GAAACGTCGCTCAAAAGCTGAAAAGTCAAAAAATCAAAACAAACAGTTGG
CAACTTGTAATTTCTTTGAAGAACTATCATTTCTTAAAGGTCACTTTCCA
CCTGCAAGTGATTTAGAAGTTAGAACTGAATCTATTCAAATACCCCAACC
ATCACAAAGGCAAGCAAGAACTAAGACACATACAAAAAAGTCTTTAACTT
CTTTATCAATGAAAAAGTTTTCTATCCAAGAGCTGAATCCAAATGATATA
TCGCAAACAGATATTGCACTAATGTCTACAAATGCATCAGAAAACAATGT
AACTGCAAACAATCCACAGTCACTTACTCCAACCAAAATTGATCAAGTTG
GAGTTGGAGAGCTGGAAACAACTAAAATGATAACTAGTGATAGTTCATTA
CACTCCACAAGTTCTTTTGATATTCAATCTGGACAGGCTGCAACCCAAAA
TGACAATACTCAGCTGTTGAATGTGAGGTACTTTCCAAGTGGTAAATTAC
CTAATGGTATGAATTCTACACATGAACCACCGGAAAAGAAACATAAACTC
CACAATGGTAATATGACTGAAGCAGACCCAAATATAAAAGACACACACCA
ACTTTTTTGTGAAAGCTTAGTTGAACCATTGCGTAGTCTTTCACCAAAGA
AAAGTAAACTTGCAAAAATGAAAATTATGCAAATATTATACGAGCTGGAA
GAATAG Coding sequence (CDS) from alignment at sc0000024_pilon:1971702..1974507- >XLOC_040985 ID=XLOC_040985|Name=XLOC_040985|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2238bp|location=Sequence derived from alignment at sc0000024_pilon:1971702..1974507- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAACAGTTCTGATGTAGATTCAAATGATAATGAAACTTTCAAAGA
AGAAGAAGGAACAACAAACGAAAGTGAGCCAGATGAAGTTCCATCACAAG
CAATAAATCTGAACAATCCAAAGGCAATGAAGAAACTATTACAAATGTCT
ACTCCAAGCCCACAAGAGCTTGACCCAGATGAAGAATATTGTTTTGAATC
AAGTACACTTTATGAAGATAAAAATGCGTTCATTTCAAAGCTTATTGAGA
AGATCAAAGAAAACCCATGTTTGTACGACCATTCAACCTTTGGGTGGCGC
TACCCTGAAAACAAAAAAGAAGTTTGGGAGAGAATTGGGAAAGAGCTTCA
AGTTGAGCACAATGGAGAACAGTTCTGATGTAGATTCAAATGATAATGAA
ACTTTCAAAGAAGAAGAAGGAACAACAAACGAAAGTGAGCCAGATGAAGT
TCCATCACAAGCAATAAATCTGAACAATCCAAAGGCAATGAAGAAACTAT
TACAAATGTCTACTCCAAGCCCACAAGAGCTTGACCCAGATGAAGAATAT
TGTTTTGAATCAAGTACACTTTATGAAGATAAAAATGCGTTCATTTCAAA
GCTTATTGAGAAGATCAAAGAAAACCCATGTTTGTACGACCATTCAACCT
TTGGGTGGCGCTACCCTGAAAACAAAAAAGAAGTTTGGGAGAGAATTGGG
AAAGAGCTTCAAGTTGAGCACATAACCCTAGAAAAAGAATTCAAGAAATT
GAAAGATAATTACCGTAAATGCTTGAAACGTCGCTCAAAAGCTGAAAAGT
CAAAAAATCAAAACAAACAGTTGGCAACTTGTAATTTCTTTGAAGAACTA
TCATTTCTTAAAGGTCACTTTCCACCTGCAAGTGATTTAGAAGTTAGAAC
TGAATCTATTCAAATACCCCAACCATCACAAAGGCAAGCAAGAACTAAGA
CACATACAAAAAAGTCTTTAACTTCTTTATCAATGAAAAAGTTTTCTATC
CAAGAGCTGAATCCAAATGATATATCGCAAACAGATATTGCACTAATGTC
TACAAATGCATCAGAAAACAATGTAACTGCAAACAATCCACAGTCACTTA
CTCCAACCAAAATTGATCAAGTTGGAGTTGGAGAGCTGGAAACAACTAAA
ATGATAACTAGTGATAGTTCATTACACTCCACAAGTTCTTTTGATATTCA
ATCTGGACAGGCTGCAACCCAAAATGACAATACTCAGCTGTTGAATGTGA
GGTACTTTCCAAGTGGTAAATTACCTAATGGTATGAATTCTACACATGAA
CCACCGGAAAAGAAACATAAACTCCACAATGGTAATATGACTGAAGCAGA
CCCAAATATAAAAGACACACACCAACTTTTTTGTGAAAGCTTAGTTGAAC
CATTGCGTAGTCTTTCACCAAAGAAAAGTAAACTTGCAAAAATGAAAATT
ATGCAAATATTATACGAGCTGGAAGAATAGTAACCCTAGAAAAAGAATTC
AAGAAATTGAAAGATAATTACCGTAAATGCTTGAAACGTCGCTCAAAAGC
TGAAAAGTCAAAAAATCAAAACAAACAGTTGGCAACTTGTAATTTCTTTG
AAGAACTATCATTTCTTAAAGGTCACTTTCCACCTGCAAGTGATTTAGAA
GTTAGAACTGAATCTATTCAAATACCCCAACCATCACAAAGGCAAGCAAG
AACTAAGACACATACAAAAAAGTCTTTAACTTCTTTATCAATGAAAAAGT
TTTCTATCCAAGAGCTGAATCCAAATGATATATCGCAAACAGATATTGCA
CTAATGTCTACAAATGCATCAGAAAACAATGTAACTGCAAACAATCCACA
GTCACTTACTCCAACCAAAATTGATCAAGTTGGAGTTGGAGAGCTGGAAA
CAACTAAAATGATAACTAGTGATAGTTCATTACACTCCACAAGTTCTTTT
GATATTCAATCTGGACAGGCTGCAACCCAAAATGACAATACTCAGCTGTT
GAATGTGAGGTACTTTCCAAGTGGTAAATTACCTAATGGTATGAATTCTA
CACATGAACCACCGGAAAAGAAACATAAACTCCACAATGGTAATATGACT
GAAGCAGACCCAAATATAAAAGACACACACCAACTTTTTTGTGAAAGCTT
AGTTGAACCATTGCGTAGTCTTTCACCAAAGAAAAGTAAACTTGCAAAAA
TGAAAATTATGCAAATATTATACGAGCTGGAAGAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000024_pilon | genome | sc0000024_pilon:1971702..1974507 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 364-1119:757 |
| Aaloc | 1-360:2807 |
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