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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000016_pilon:2314181..2315377+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040978 ID=XLOC_040978|Name=XLOC_040978|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1197bp|location=Sequence derived from alignment at sc0000016_pilon:2314181..2315377+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCatatttatcaaataatttCATGAGTACTTTATATAAACAGTATAT
TCACAACAAAACAGATGAAACTTTAAGCTCTggacaaatttcaaaacaaa
cgccAGAAGAGAGTCTTGACATCCCTAATGCTTCTGGATCATTCTATTTG
TTAACATCAGCCAATACGACGGTTATCGTTATTTTCTCTTGTGTTCTGTT
GACTGGAGTTGTTGGCAATCTTGGTTTGATATTCGCTGCATCAAGAATGA
AACATAAAATCCGAATCTTGACAAACCAGTTCAAACTCTTATGTGGAATC
AATGTAATCACATCTTTCTTTATACCCACATTACTAATTTACCAAGTCAT
CAATGATTACCAAAGATGGGAGTTTGGAAATTTCGGTTGCACCATCTTAC
CATCTTTAAACCAGTTCTCAATCACTGCTTCTCAAGGTATCTGTATTATG
ATGTTACTtgaacaatatattttaatgaccagaccgTTTTACCAATCACC
TGCAAACTTaccttcaaaaaatattctcagTTGGTgttttgttatcattt
ttcttgCTGTCTTGATGGAGATCCCTTATGCCAGTACCttgaaaatcatc
caaaacGAAGAGATCAATACTTGTTTGTCTGTTGGTGCACATGGTGTCCA
GTTAGCAGCATCATCCATTCATTTTGTAAGAGATGCTATTATGCTGGCAG
TAACTGTTTACCTTCTGCTTAAGTGTCAGAAAgtcatttccaaaaatttg
caCATGAACTCGACCAAGACCAACTGTAGAAGAAACATCGCTGGTGTCAT
AGCTTTAACTCAACTTTTCCTGGTCATCCCCTCAGATTTCTTCCATGTAT
TCGTCCAATCCGTCAATTTGACACATAAAGGCAATACCAAATGGCAAAAT
AAATCGAACAGACTCAATGATGTAAACACAGtctttgaaatcattcaaaT
GCTGAGATTAGTATCAAAtgttttcatcttccttttcgTATTGATGAAAA
ACTGTGGCACAACAGAATCAACAACTAACGTTGTAATCTCAACTGAGCAA
TGTGAACATTTAAGAGAAGCAACTTCATTCCCAGGTTTCAGCGATGGAAA
GAGACgattgaaaaataaacttttggtGAAAATCATTGATGAAGAAGATC
CATATTATTTGACTGAAACATCTTCGTGTGcatcttcaaatttttaa Coding sequence (CDS) from alignment at sc0000016_pilon:2314181..2315377+ >XLOC_040978 ID=XLOC_040978|Name=XLOC_040978|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2394bp|location=Sequence derived from alignment at sc0000016_pilon:2314181..2315377+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCatatttatcaaataatttCATGAGTACTTTATATAAACAGTATAT
TCACAACAAAACAGATGAAACTTTAAGCTCTggacaaatttcaaaacaaa
cgccAGAAGAGAGTCTTGACATCCCTAATGCTTCTGGATCATTCTATTTG
TTAACATCAGCCAATACGACGGTTATCGTTATTTTCTCTTGTGTTCTGTT
GACTGGAGTTGTTGGCAATCTTGGTTTGATATTCGCTGCATCAAGAATGA
AACATAAAATCCGAATCTTGACAAACCAGTTCAAACTCTTATGTGGAATC
AATGTAATCACATCTTTCTTTATACCCACATTACTAATTTACCAAGTCAT
CAATGATTACCAAAGATGGGAGTTTGGAAATTTCGGTTGCACCATCTTAC
CATCTTTAAACCAGTTCTCAATCACTGCTTCTCAAGGTATCTGTATTATG
ATGTTACTtgaacaatatattttaatgaccagaccgTTTTACCAATCACC
TGCAAACTTaccttcaaaaaatattctcagTTGGTgttttgttatcattt
ttcttgCTGTCTTGATGGAGATCCCTTATGCCAGTACCttgaaaatcatc
caaaacGAAGAGATCAATACTTGTTTGTCTGTTGGTGCACATGGTGTCCA
GTTAGCAGCATCATCCATTCATTTTGTAAGAGATGCTATTATGCTGGCAG
TAACTGTTTACCTTCTGCTTAAGTGTCAGAAAgtcatttccaaaaatttg
caCATGAACTCGACCAAGACCAACTGTAGAAGAAACATCGCTGGTGTCAT
AGCTTTAACTCAACTTTTCCTGGTCATCCCCTCAGATTTCTTCCATGTAT
TCGTCCAATCCGTCAATTTGACACATAAAGGCAATACCAAATGGCAAAAT
AAATCGAACAGACTCAATGATGTAAACACAGtctttgaaatcattcaaaT
GCTGAGATTAGTATCAAAtgttttcatcttccttttcgTATTGATGAAAA
ACTGTGGCACAACAGAATCAACAACTAACGTTGTAATCTCAACTGAGCAA
TGTGAACATTTAAGAGAAGCAACTTCATTCCCAGGTTTCAGCGATGGAAA
GAGACgattgaaaaataaacttttggtGAAAATCATTGATGAAGAAGATC
CATATTATTTGACTGAAACATCTTCGTGTGcatcttcaaatttttaaATG
GCatatttatcaaataatttCATGAGTACTTTATATAAACAGTATATTCA
CAACAAAACAGATGAAACTTTAAGCTCTggacaaatttcaaaacaaacgc
cAGAAGAGAGTCTTGACATCCCTAATGCTTCTGGATCATTCTATTTGTTA
ACATCAGCCAATACGACGGTTATCGTTATTTTCTCTTGTGTTCTGTTGAC
TGGAGTTGTTGGCAATCTTGGTTTGATATTCGCTGCATCAAGAATGAAAC
ATAAAATCCGAATCTTGACAAACCAGTTCAAACTCTTATGTGGAATCAAT
GTAATCACATCTTTCTTTATACCCACATTACTAATTTACCAAGTCATCAA
TGATTACCAAAGATGGGAGTTTGGAAATTTCGGTTGCACCATCTTACCAT
CTTTAAACCAGTTCTCAATCACTGCTTCTCAAGGTATCTGTATTATGATG
TTACTtgaacaatatattttaatgaccagaccgTTTTACCAATCACCTGC
AAACTTaccttcaaaaaatattctcagTTGGTgttttgttatcatttttc
ttgCTGTCTTGATGGAGATCCCTTATGCCAGTACCttgaaaatcatccaa
aacGAAGAGATCAATACTTGTTTGTCTGTTGGTGCACATGGTGTCCAGTT
AGCAGCATCATCCATTCATTTTGTAAGAGATGCTATTATGCTGGCAGTAA
CTGTTTACCTTCTGCTTAAGTGTCAGAAAgtcatttccaaaaatttgcaC
ATGAACTCGACCAAGACCAACTGTAGAAGAAACATCGCTGGTGTCATAGC
TTTAACTCAACTTTTCCTGGTCATCCCCTCAGATTTCTTCCATGTATTCG
TCCAATCCGTCAATTTGACACATAAAGGCAATACCAAATGGCAAAATAAA
TCGAACAGACTCAATGATGTAAACACAGtctttgaaatcattcaaaTGCT
GAGATTAGTATCAAAtgttttcatcttccttttcgTATTGATGAAAAACT
GTGGCACAACAGAATCAACAACTAACGTTGTAATCTCAACTGAGCAATGT
GAACATTTAAGAGAAGCAACTTCATTCCCAGGTTTCAGCGATGGAAAGAG
ACgattgaaaaataaacttttggtGAAAATCATTGATGAAGAAGATCCAT
ATTATTTGACTGAAACATCTTCGTGTGcatcttcaaatttttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000016_pilon | genome | sc0000016_pilon:2314181..2315377 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1197:1 |
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