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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000141_pilon:188444..191253+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040924 ID=XLOC_040924|Name=XLOC_040924|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2810bp|location=Sequence derived from alignment at sc0000141_pilon:188444..191253+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTATTATCAAATACGAGGAATAAGtttcagattttattttcattttca
acggCTTTTGCGTGGTTCTGGTTTTGTGAAATTAAGAAAGTTATCAAATA
ATAGTAAGTTTTACAGGATGAGACTCATCTTTCTGTCGATTGccgcattt
ttaaattttgtgtttGGTCAAATCATGAGACTACCTCAATGTAACAAATA
CGGAGCCACTTTTAAAGTTTCCAAACGTAAACTCAAAGTTGAAGCTAAGT
TCGATGCTCAAAGGTTGAACActcatgaaaaaattaaatccaaagAGATA
TGCAGTTCTCTTTGCATCGAGAATGACGATTGCCAATCAGCTTTTTATGG
ACGCTTAACCAAAAAATGCTTCCTGTATAACAAGAAGTTTGATCCAGATG
AGCTGGAAGAGTCAGATACAATGTTTTATCTGACAACTGCACAAAACGAC
GGAGATAACCATGTAAGGAATCATTCTTCTTTAGTTTATAACAACCAGTC
AACTTTGCTGAGATATCAGAAACTCAAAAACTAttaccaaatttaaaaat
tccctttttttGAGTTGCTAAATTCCTCCAATATGCTCCAATTTATACGA
AAATTGCAAATTAGTCCATTCACTAACTTCTCCttgaaatttcttctctt
aatgtagtttttatttttttgaattttaagaattATTTAGCTTCTGATGT
AAATCAGTTTCCCTTGAGTTTCCTGTAGATGGAACCTCAGTGAAATGCTG
GTAGAGGTCTTTTCAGAACCACGTGTCTGGACCTCCGAGATAATGACATT
CTTACTATAATACTGTAAATGATTGGTAATTTCAGCACGGCCACGCATGC
GCATCAAACAAATGTAATCCAAAGGGCACAGAAAAATGTGAAGAAACTTG
TGAACAACCCAATGGATACAAATGTTATTGTTTGAAAGGATTCGGTGGCG
ATTTTTGCGAAGAAAGTAAGTAAACACTTGTTTAAAAGTAAGTAATGCGT
GAAATAAGAACCAGTCAGAGTCGGAGGTGACCCGTTTTTAATAATGTCAC
CACTCTGTCACCTTGGCTTACCCAGCACACACCATTTATCCTTGAATGAA
TGGCtgaataatttttgatgaatcCTTATTTCCTCCGATACTCAAAACAA
TCATCGTCCAGTCTAAATCTGGACGCAttaaactttctttaaaaacattt
tatgatTGATCATTTAGTTGAAGCACATTCGCTTTAAGTCTGCGCTCTTT
TTAGTGACCAAATAGAAACCACACTGACGGGGATCTGTTCAACCAAATAG
AAACCACACTCACGGGAATTTGTTCAACCAAATAGAAACCACACTCACGG
GGATCCGTTCAACCAAATAGAAACCACACTCACGGGAATCTGTTCAACCA
AATAGAAACCACACTCACGGGAATCTGTTCAACCAAATAGAAACCACACT
CACGGGGATCTGTTCAACCAAATAGAAACCACATTCACGGGAATCTGTTT
AATTCAACTAACATAGTTTACATATGGTATGGTTGTAAAAAAGAGTGCGT
GGTTAGGACTTATTGAATATTACAGTAAAAttaatctacaatcatggtca
aaatttaatgagaatttagcttatttcctcgtttttcgaaatttggagtt
cgggcggtaaagtcgcttttgggctaattgataaatttattcgagtattt
caatttgggTGGGGTTTACAGACTTCTGGGCCATATTTTGAGCCCTATTG
Gacttttcttgaacttttggatcctctcatcctaaggtcctaagtcttaa
acCTAGccttaaaactcagagttaaaactctacccttccaacctaattta
gagcgcttgcAAATCGtttgtgggaatttccctttttctcaaatattatg
accgtGATTGTAATTTTTGTTTCAGGATTATTATGCAATCGAACGATTAA
ACCAATTGGTTGTTTTGCTGATTCTCCATCTGATCGAGCAATGGCCATCT
TCATTGGAAATTATAGAGATGACATCGATTGGGATAATTATGAAGTTAAT
TTCGAAGAGTATGTAGATAGTCTCCCTTCAATTTGAATGAAATGTTAGAA
TTTAAAcgcattattttgatattttgtgttaactatctttcttttctttc
cttaCTGTACACTTGGGCCTGTCCAATTGATTTAGTTTGATTAGTGGATG
AAATTTTCCGTGTTTACCGTATTTAAGGTTAACTTTCAAGACAAAAATCT
TGCTGAAACTTCCAATCACAAAAATGTTTGcaataattaatgatattcat
gacgcaaCGTTTTTTACGGCAACACCCCGGTTATttccagtagtggcaaa
ttagAGCTTAGCAGCAAATTAGAGCTAAAAATAAATTCGTCACTACTAGC
AAAAATTAGGGTGTTTCCTTCAAGAACATTACGTTCTGaaaaaaaaCCAC
GAATAAAATTTACTGTCCGATTTGAGATAAGTCAGAGTAGCAGTTACAGC
GAAAGTTAGGTAAAAATACTGAGCAGtctttaaaaaaacagccacacAGC
TGCCCGAGTAAAATACTGCATAGTGTCTTAGATAGTCAAGACccatatat
tcatgatattcacgaagtaatgttttataagaaaacacaCATAAAAACTC
GttttttttgccactagttttgttgtttaaattcaaaactagtGAAAAAC
GCCCTGTTGTTTTTGAaagcttccgtataaaacattacgtcatgaataac
aTAAATAGATACATTTCTTTTTCCAGGATATTATGCAAATGCATAGGAGA
AACTGAATGA Coding sequence (CDS) from alignment at sc0000141_pilon:188444..191253+ >XLOC_040924 ID=XLOC_040924|Name=XLOC_040924|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1518bp|location=Sequence derived from alignment at sc0000141_pilon:188444..191253+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTATTATCAAATACGAGGAATAAGtttcagattttattttcattttca
acggCTTTTGCGTGGTTCTGGTTTTGTGAAATTAAGAAAGTTATCAAATA
ATAGTAAGTTTTACAGGATGAGACTCATCTTTCTGTCGATTGccgcattt
ttaaattttgtgtttGGTCAAATCATGAGACTACCTCAATGTAACAAATA
CGGAGCCACTTTTAAAGTTTCCAAACGTAAACTCAAAGTTGAAGCTAAGT
TCGATGCTCAAAGGTTGAACActcatgaaaaaattaaatccaaagAGATA
TGCAGTTCTCTTTGCATCGAGAATGACGATTGCCAATCAGCTTTTTATGG
ACGCTTAACCAAAAAATGCTTCCTGTATAACAAGAAGTTTGATCCAGATG
AGCTGGAAGAGTCAGATACAATGTTTTATCTGACAACTGCACAAAACGAC
GGAGATAACCATATTTATTATCAAATACGAGGAATAAGtttcagatttta
ttttcattttcaacggCTTTTGCGTGGTTCTGGTTTTGTGAAATTAAGAA
AGTTATCAAATAATAGTAAGTTTTACAGGATGAGACTCATCTTTCTGTCG
ATTGccgcatttttaaattttgtgtttGGTCAAATCATGAGACTACCTCA
ATGTAACAAATACGGAGCCACTTTTAAAGTTTCCAAACGTAAACTCAAAG
TTGAAGCTAAGTTCGATGCTCAAAGGTTGAACActcatgaaaaaattaaa
tccaaagAGATATGCAGTTCTCTTTGCATCGAGAATGACGATTGCCAATC
AGCTTTTTATGGACGCTTAACCAAAAAATGCTTCCTGTATAACAAGAAGT
TTGATCCAGATGAGCTGGAAGAGTCAGATACAATGTTTTATCTGACAACT
GCACAAAACGACGGAGATAACCATCACGGCCACGCATGCGCATCAAACAA
ATGTAATCCAAAGGGCACAGAAAAATGTGAAGAAACTTGTGAACAACCCA
ATGGATACAAATGTTATTGTTTGAAAGGATTCGGTGGCGATTTTTGCGAA
GAAACACGGCCACGCATGCGCATCAAACAAATGTAATCCAAAGGGCACAG
AAAAATGTGAAGAAACTTGTGAACAACCCAATGGATACAAATGTTATTGT
TTGAAAGGATTCGGTGGCGATTTTTGCGAAGAAAGATTATTATGCAATCG
AACGATTAAACCAATTGGTTGTTTTGCTGATTCTCCATCTGATCGAGCAA
TGGCCATCTTCATTGGAAATTATAGAGATGACATCGATTGGGATAATTAT
GAAGTTAATTTCGAAGAGATTATTATGCAATCGAACGATTAAACCAATTG
GTTGTTTTGCTGATTCTCCATCTGATCGAGCAATGGCCATCTTCATTGGA
AATTATAGAGATGACATCGATTGGGATAATTATGAAGTTAATTTCGAAGA
GATATTATGCAAATGCATAGGAGAAACTGAATGAGATATTATGCAAATGC
ATAGGAGAAACTGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000141_pilon | genome | sc0000141_pilon:188444..191253 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 727-759:2778 |
| Aaloc | 595-723:1928 |
| Aaloc | 463-591:836 |
| Aaloc | 1-462:1 |
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