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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:1033305..1035930+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040922 ID=XLOC_040922|Name=XLOC_040922|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2626bp|location=Sequence derived from alignment at sc0000042_pilon:1033305..1035930+ (Clytia hemisphaerica_ch_hm2_pilon)
atgatgTTGCTTGACAAAAGGTTgcttttacctttttttatcCTAGCTTG
TAAAAGAAACTAAATATTCTGTTGTAGAGATGAAATGATTTATAACGGTA
GAACTTCTTGTAAAACCATtcatttcttttctctttaGTTCTTCAGTgtt
cttcatatgaatggtTTTATGAAGATGTCGACTGTTGTGAATCATGCTTA
TCCTAAAcacagtttttgtttttcttagcATAGAATAAAGCGAGGCGATT
ATGATTCAACATTAAAGTTGCATGTACAATGAAATGAGAAAGTTGTGGAT
TTGTACCCTACTGGTTCATCAAAGTCACTCAATAAGAAAGCCGGAGTGGT
GATTTCATTAGAGTGAAATCTCTCCTATATTTATTGTTTGTGCATGCTTA
TAACAAAATCTGTTATAGGGATACGTATGCAGCCTATGTATAATTTGACT
TCTTTCTATCATTGAACACCGTTCCGCTCTTTCTCATCCTTCAGGGCGAC
ATACGATAAGACGAAGACGTACACACTTGATGAACTGATGGAGATGTCAA
ACTTGGAACCAGCTGGTCATCATGCTAAACCAAATCACATCAAACGACCG
ATGAACTCGTTCATGGTAAGAAGCAGATTCATATCCCTCGGATgttgtta
acttttttttagttttaagccttaaaatgttcttaacatgctcttgTTAT
CGCCGTTTTGTGAGCACTTTTGttcatttccctaagaaatcgggtcTTAT
AGGGTCTgcaaaagccttaaaatgttcttaactggtTCTTAGTatattgg
ccatcgaagccttatgttcttataaaaaatggcTATATCATTGAGAGGAT
AATCGAAATGTTTTGCCATTGCATTTATAATGAAATGGGGGTGTACTTAC
GCAAAATGGGAGTTGGTTATGTGCGAGGTGTAAGGGTCTTGAAAGACTCT
CGCAAagtttaaaaagcaatttagtcTAATAGGGTTCCAAGATTACGATA
CGCTCGGACATAACCGTCTCCTCAAAAACACAACTTCTTCAAGGAGttta
atattttacaaatacatTACTTATTTCTAGCATATCTTTAAGTTTTCTAC
TAAGAGCTTTTACAACTCAATTGGATTGGATTCTCACACTAGATAAATAG
CACTTTAATTTAGGATAAATCTTTCTTCCATTCAAACTTTCTTAAGCTTG
AAAAACAAGAGCTGCAAAGGTTTCGAGCTGTAGatgttttcagaaaatga
atATTTCTCTTCTATTCAAACAGGTTTGGTCGAGAATGGAACgcaagcgt
atcagtgaagaaAATCCGAAACTTCACAATTCAGAGATCTCCAAACGTCT
TGGTGCTTCATGGAAAATGTTATCTGAAGAGGAACGAAAACCGTTCGCTG
AAGAGGCCAAAAGATTACGTCAGATTCACATCCAAGAACATCCTGAGTAT
AAGTATCGTCCACGACGGAAGCCGAAACTGTCTGTCCCTACACAACATCA
TGTTCGTAAACATCAATCTACGGCTGCCGGCAAAACAGTACCCATTCCTA
TTCCTGAATATATACCATCTAGAAGTGGTTCACGTCCTGCAGTGGTCCCT
GTGTATTACCATAGTCCGCACTATATTCAACATCCTGGATCCACACGTGA
AGGCCATCCTGTTCACTATCCAACTACCGCCCGTGAAGTCCGTTACTACC
GCCCTCGAAGTCCAGATTATAACGGGCGTTCAAGAAGCCCAGTTGATCGT
GATAGAGAGTACCGCCATTCTCCGGGCGTTGTTTATCGATCATATAGCCC
ACCTCCTCAACCTAGAGAAGCGTACTACTATCAATCAAGATCAGAGGCTA
AACAGAATAGTTACCATGACGATGAGCCATCCGACGGCGAAAATAAAACT
GACACAAACACTGAGGAGACGAACAATAACAACACCGAGaaaaaaTCGTC
GTCTGGCGAAAATAACCGTGACGTAAACGACAATGTGAAAGCCTTGACAA
CGACTCGGTAACGAAACCACGTAAAAAGGGCGTCGACGATTTATTAGGCT
TGAAATTACGAAAACAAGCGCAACagaaagaacaagaggaagagagcgag
aaagagaagaatgaacgtaaagaagaagCAAATACAACTGTCGAAAAACG
CGAATCTCGTAACAGCGGCAGCAAACCAGTGTATTACAAATATGAACGTT
ATACGTCGCCGCCTCCTCCCTCACACCATCGAGAATATAGACAGGGTTCC
TCCTATATGGTACCCGTCCCAATCGTTCTTCATCCTCACTCCTCCCATGG
AGAGATCTGTTACAAGGACTGCTGTATGGTCCCTGCTACCTCTTACTACC
CACACCACCCTCATGAAGGGGTCGAATACAGACGTACATATAGTAGTGAC
AAAACAAGATGCTACAGTCCTGATTACGAAAGTGGTAGCTCTAAAAAGAC
TTATGTTGTATATGGAGAGCGGCCATCTTCTTCCTCCCCTCCTACCCCTA
TGGTAGCTGCCAGGAGCAGGTCTCCCTCTCCACCGCAACAGACTGAAAGA
AAGGGAGAAGACTCCCCCTTCAAAAGAGAAGTCACCTCGATCTTCCCCTA
AAGACACTGGAAATGAAACAGACTAA Coding sequence (CDS) from alignment at sc0000042_pilon:1033305..1035930+ >XLOC_040922 ID=XLOC_040922|Name=XLOC_040922|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2988bp|location=Sequence derived from alignment at sc0000042_pilon:1033305..1035930+ (Clytia hemisphaerica_ch_hm2_pilon)
atgatgTTGCTTGACAAAAGatgatgTTGCTTGACAAAAGGGCGACATAC
GATAAGACGAAGACGTACACACTTGATGAACTGATGGAGATGTCAAACTT
GGAACCAGCTGGTCATCATGCTAAACCAAATCACATCAAACGACCGATGA
ACTCGTTCATGGGCGACATACGATAAGACGAAGACGTACACACTTGATGA
ACTGATGGAGATGTCAAACTTGGAACCAGCTGGTCATCATGCTAAACCAA
ATCACATCAAACGACCGATGAACTCGTTCATGGTTTGGTCGAGAATGGAA
CgcaagcgtatcagtgaagaaAATCCGAAACTTCACAATTCAGAGATCTC
CAAACGTCTTGGTGCTTCATGGAAAATGTTATCTGAAGAGGAACGAAAAC
CGTTCGCTGAAGAGGCCAAAAGATTACGTCAGATTCACATCCAAGAACAT
CCTGAGTATAAGTATCGTCCACGACGGAAGCCGAAACTGTCTGTCCCTAC
ACAACATCATGTTCGTAAACATCAATCTACGGCTGCCGGCAAAACAGTAC
CCATTCCTATTCCTGAATATATACCATCTAGAAGTGGTTCACGTCCTGCA
GTGGTCCCTGTGTATTACCATAGTCCGCACTATATTCAACATCCTGGATC
CACACGTGAAGGCCATCCTGTTCACTATCCAACTACCGCCCGTGAAGTCC
GTTACTACCGCCCTCGAAGTCCAGATTATAACGGGCGTTCAAGAAGCCCA
GTTGATCGTGATAGAGAGTACCGCCATTCTCCGGGCGTTGTTTATCGATC
ATATAGCCCACCTCCTCAACCTAGAGAAGCGTACTACTATCAATCAAGAT
CAGAGGCTAAACAGAATAGTTACCATGACGATGAGCCATCCGACGGCGAA
AATAAAACTGACACAAACACTGAGGAGACGAACAATAACAACACCGAGaa
aaaaTCGTCGTCTGGCGAAAATAACCGTGACGTAAACGACAATGTGAAAG
CCTTGACAACGACTCGGTAACGAAACCACGTAAAAAGGGCGTCGACGATT
TATTAGGCTTGAAATTACGAAAACAAGCGCAACagaaagaacaagaggaa
gagagcgagaaagagaagaatgaacgtaaagaagaagCAAATACAACTGT
CGAAAAACGCGAATCTCGTAACAGCGGCAGCAAACCAGTGTATTACAAAT
ATGAACGTTATACGTCGCCGCCTCCTCCCTCACACCATCGAGAATATAGA
CAGGGTTCCTCCTATATGGTACCCGTCCCAATCGTTCTTCATCCTCACTC
CTCCCATGGAGAGATCTGTTACAAGGACTGCTGTATGGTCCCTGCTACCT
CTTACTACCCACACCACCCTCATGAAGGGGTCGAATACAGACGTACATAT
AGTAGTGACAAAACAAGATGCTACAGTCCTGATTACGAAAGTGGTAGCTC
TAAAAAGACTTATGTTGTATATGGAGAGCGGCCATCTTCTTCCTCCCCTC
CTACCCCTATGGTAGCTGCCAGGAGCAGGTCTCCCTCTCCACCGCAACAG
ACTGAAAGAAAGGGAGAAGACTCCCCCTTCAAAAGAGAAGTCACCTCGAT
CTTCCCCTAAAGACACTGGAAATGAAACAGACTAAGTTTGGTCGAGAATG
GAACgcaagcgtatcagtgaagaaAATCCGAAACTTCACAATTCAGAGAT
CTCCAAACGTCTTGGTGCTTCATGGAAAATGTTATCTGAAGAGGAACGAA
AACCGTTCGCTGAAGAGGCCAAAAGATTACGTCAGATTCACATCCAAGAA
CATCCTGAGTATAAGTATCGTCCACGACGGAAGCCGAAACTGTCTGTCCC
TACACAACATCATGTTCGTAAACATCAATCTACGGCTGCCGGCAAAACAG
TACCCATTCCTATTCCTGAATATATACCATCTAGAAGTGGTTCACGTCCT
GCAGTGGTCCCTGTGTATTACCATAGTCCGCACTATATTCAACATCCTGG
ATCCACACGTGAAGGCCATCCTGTTCACTATCCAACTACCGCCCGTGAAG
TCCGTTACTACCGCCCTCGAAGTCCAGATTATAACGGGCGTTCAAGAAGC
CCAGTTGATCGTGATAGAGAGTACCGCCATTCTCCGGGCGTTGTTTATCG
ATCATATAGCCCACCTCCTCAACCTAGAGAAGCGTACTACTATCAATCAA
GATCAGAGGCTAAACAGAATAGTTACCATGACGATGAGCCATCCGACGGC
GAAAATAAAACTGACACAAACACTGAGGAGACGAACAATAACAACACCGA
GaaaaaaTCGTCGTCTGGCGAAAATAACCGTGACGTAAACGACAATGTGA
AAGCCTTGACAACGACTCGGTAACGAAACCACGTAAAAAGGGCGTCGACG
ATTTATTAGGCTTGAAATTACGAAAACAAGCGCAACagaaagaacaagag
gaagagagcgagaaagagaagaatgaacgtaaagaagaagCAAATACAAC
TGTCGAAAAACGCGAATCTCGTAACAGCGGCAGCAAACCAGTGTATTACA
AATATGAACGTTATACGTCGCCGCCTCCTCCCTCACACCATCGAGAATAT
AGACAGGGTTCCTCCTATATGGTACCCGTCCCAATCGTTCTTCATCCTCA
CTCCTCCCATGGAGAGATCTGTTACAAGGACTGCTGTATGGTCCCTGCTA
CCTCTTACTACCCACACCACCCTCATGAAGGGGTCGAATACAGACGTACA
TATAGTAGTGACAAAACAAGATGCTACAGTCCTGATTACGAAAGTGGTAG
CTCTAAAAAGACTTATGTTGTATATGGAGAGCGGCCATCTTCTTCCTCCC
CTCCTACCCCTATGGTAGCTGCCAGGAGCAGGTCTCCCTCTCCACCGCAA
CAGACTGAAAGAAAGGGAGAAGACTCCCCCTTCAAAAGAGAAGTCACCTC
GATCTTCCCCTAAAGACACTGGAAATGAAACAGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:1033305..1035930 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1417-1491:2552 |
| Aaloc | 874-1416:2008 |
| Aaloc | 142-873:1274 |
| Aaloc | 22-141:496 |
| Aaloc | 1-18:1 |
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