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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000163_pilon:271376..272485+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040880 ID=XLOC_040880|Name=XLOC_040880|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1110bp|location=Sequence derived from alignment at sc0000163_pilon:271376..272485+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTAGTTTTATCAACAATACTACGGTTCGACCAATCACATCAAACCT
AACGACACCATCTTTATTCTACGAACCGCCTCCTTATCCATGCATCTGGC
CTCTGTTCCCGCCATATTCATTCACCAGTCTAACTCTTGCAATTTTGATC
ATAACATTGAATGGTTTTGTCGTTTACCTATTCTTTCGAAACAAAATTCT
ACGCTTGCTGCCAGGAAATTATATCTTAGCAAGTTTAGCGGTTAATGATC
TCCTTAATGGTTTATTCCTTgtttccaaactctacccgaatttttatctc
cataataATGACTGTTCGAATaatcaacaaaagtttttgaaagccGAATT
TCCAACAATAAGTAATACAATTTATCTTTTATTAATGTTATCTTCAATCC
TTCATTTGGTGTTATTATCAACCGATCGACTGATATACATCATTCATGCT
TTAACATATAACTCTATAGTCACCAAACGAAAGATGTTAAAAATCTTAGC
AATCACTTGGTTACTTTGCGGTATCTTCGCTGCCCTTAAGTTCCTGTGGA
GTCTCAAAAGTGGACCTTTAAATCCATATCGGAAATCAATCAAGATCTAC
GCTGCAATCACCATAGCTGTTTTATTCATCGGCCTTCCGTCTATAATTCT
ACTTATCCAGTCTATCATTATGGTGTTAATGGTACGCAGGCTAGACAATA
AAAGTAGCCCGGATCCTAATAAACGAACGGGAGGTTGTAAAGCGTTTGTA
CTGTACATGTTTATGTATTTAAAGTTCATGGTTTTTGCGTACCCCTATCT
GATTATCATGTTGATGTTTCAATTCGGTGCATTTGAGCCTCCTCTTATTG
CACCGTCAATGAACGCCATTGTTATTTGTACCGTTATTCGGTTTGTACCT
TGTCTCGTTAACCCATGTTTATACAGCTtacaaaataaagattttaggAA
AGTTATCAAGACTTATTTGAAATATTGTCGGAAAACGTCGCAGAGTTATG
CAATGGTTAGGAAAACGGGAGCCTCGAATTATTTGGGGACACTCTCGCCT
CAGACAAATCTTTATAAAATGAACGGTGATTCTACGGAAGAAAGTTTGGT
CAATTTATGA Coding sequence (CDS) from alignment at sc0000163_pilon:271376..272485+ >XLOC_040880 ID=XLOC_040880|Name=XLOC_040880|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2220bp|location=Sequence derived from alignment at sc0000163_pilon:271376..272485+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTAGTTTTATCAACAATACTACGGTTCGACCAATCACATCAAACCT
AACGACACCATCTTTATTCTACGAACCGCCTCCTTATCCATGCATCTGGC
CTCTGTTCCCGCCATATTCATTCACCAGTCTAACTCTTGCAATTTTGATC
ATAACATTGAATGGTTTTGTCGTTTACCTATTCTTTCGAAACAAAATTCT
ACGCTTGCTGCCAGGAAATTATATCTTAGCAAGTTTAGCGGTTAATGATC
TCCTTAATGGTTTATTCCTTgtttccaaactctacccgaatttttatctc
cataataATGACTGTTCGAATaatcaacaaaagtttttgaaagccGAATT
TCCAACAATAAGTAATACAATTTATCTTTTATTAATGTTATCTTCAATCC
TTCATTTGGTGTTATTATCAACCGATCGACTGATATACATCATTCATGCT
TTAACATATAACTCTATAGTCACCAAACGAAAGATGTTAAAAATCTTAGC
AATCACTTGGTTACTTTGCGGTATCTTCGCTGCCCTTAAGTTCCTGTGGA
GTCTCAAAAGTGGACCTTTAAATCCATATCGGAAATCAATCAAGATCTAC
GCTGCAATCACCATAGCTGTTTTATTCATCGGCCTTCCGTCTATAATTCT
ACTTATCCAGTCTATCATTATGGTGTTAATGGTACGCAGGCTAGACAATA
AAAGTAGCCCGGATCCTAATAAACGAACGGGAGGTTGTAAAGCGTTTGTA
CTGTACATGTTTATGTATTTAAAGTTCATGGTTTTTGCGTACCCCTATCT
GATTATCATGTTGATGTTTCAATTCGGTGCATTTGAGCCTCCTCTTATTG
CACCGTCAATGAACGCCATTGTTATTTGTACCGTTATTCGGTTTGTACCT
TGTCTCGTTAACCCATGTTTATACAGCTtacaaaataaagattttaggAA
AGTTATCAAGACTTATTTGAAATATTGTCGGAAAACGTCGCAGAGTTATG
CAATGGTTAGGAAAACGGGAGCCTCGAATTATTTGGGGACACTCTCGCCT
CAGACAAATCTTTATAAAATGAACGGTGATTCTACGGAAGAAAGTTTGGT
CAATTTATGAATGACTAGTTTTATCAACAATACTACGGTTCGACCAATCA
CATCAAACCTAACGACACCATCTTTATTCTACGAACCGCCTCCTTATCCA
TGCATCTGGCCTCTGTTCCCGCCATATTCATTCACCAGTCTAACTCTTGC
AATTTTGATCATAACATTGAATGGTTTTGTCGTTTACCTATTCTTTCGAA
ACAAAATTCTACGCTTGCTGCCAGGAAATTATATCTTAGCAAGTTTAGCG
GTTAATGATCTCCTTAATGGTTTATTCCTTgtttccaaactctacccgaa
tttttatctccataataATGACTGTTCGAATaatcaacaaaagtttttga
aagccGAATTTCCAACAATAAGTAATACAATTTATCTTTTATTAATGTTA
TCTTCAATCCTTCATTTGGTGTTATTATCAACCGATCGACTGATATACAT
CATTCATGCTTTAACATATAACTCTATAGTCACCAAACGAAAGATGTTAA
AAATCTTAGCAATCACTTGGTTACTTTGCGGTATCTTCGCTGCCCTTAAG
TTCCTGTGGAGTCTCAAAAGTGGACCTTTAAATCCATATCGGAAATCAAT
CAAGATCTACGCTGCAATCACCATAGCTGTTTTATTCATCGGCCTTCCGT
CTATAATTCTACTTATCCAGTCTATCATTATGGTGTTAATGGTACGCAGG
CTAGACAATAAAAGTAGCCCGGATCCTAATAAACGAACGGGAGGTTGTAA
AGCGTTTGTACTGTACATGTTTATGTATTTAAAGTTCATGGTTTTTGCGT
ACCCCTATCTGATTATCATGTTGATGTTTCAATTCGGTGCATTTGAGCCT
CCTCTTATTGCACCGTCAATGAACGCCATTGTTATTTGTACCGTTATTCG
GTTTGTACCTTGTCTCGTTAACCCATGTTTATACAGCTtacaaaataaag
attttaggAAAGTTATCAAGACTTATTTGAAATATTGTCGGAAAACGTCG
CAGAGTTATGCAATGGTTAGGAAAACGGGAGCCTCGAATTATTTGGGGAC
ACTCTCGCCTCAGACAAATCTTTATAAAATGAACGGTGATTCTACGGAAG
AAAGTTTGGTCAATTTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000163_pilon | genome | sc0000163_pilon:271376..272485 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1110:1 |
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