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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000261_pilon:81526..83405+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040872 ID=XLOC_040872|Name=XLOC_040872|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1880bp|location=Sequence derived from alignment at sc0000261_pilon:81526..83405+ (Clytia hemisphaerica_ch_hm2_pilon)
atggtagactttgTATGGTGTCGCATCGTTATACTTACTTACAGTCAAGG
GAGAGAAATCGTGAAATGGaccgaaaaaatctttttctgtcCGCCTGCAT
GACTTCTTTTCTTatcgtcacccggtggaccagaaacaaaaaatttttta
gggcCGGCCCTGctggtggaccggaaacaaattTTTTAGGGTCTGCCCTG
TGTCTGGAGACTTAAAAAGtagtcggatttggctgaaatttggtacagtt
gttccttgagtgaatacctattggtgtttttttcatttttgagggGTAAG
TTGTAgcgccaaaacgaggcttaaATGTGACTCGGGGACTCGTTTTTGAG
GTTAGAATGAGGTTAAAAAGTCGCTTAGATTTCTATAACCATTGCATTTT
ATTGGTTATATACACAATTTTCTCCAATTGTAATTGTCGACTTATATATC
TAAAAATTTCCcccttgttttttcttttgcagaTGGCTACTAACAATGAC
AGAAAACTTTGGGAAGAACgtgcacaaaaactgaaaaggaAGAGAATGGG
TCAGGACACAGTGAAGGGTGATAAAGCTGGTGCTGTTGGTTCTCATATTT
TAGCCGAGAGAGAAAGGACTGTTCAACGTCTTTCTAGTGTTGCTACTGGG
AAAGCAatgaaattcaataaaatggggCCTCAGGAATTCGTGGCCTATCC
ATTTGATGAATTGACAATCGAAAATTTGATTCAAGCGTGCAGTGCACATT
TTCGAGATGAATTGCTTGACAATCAAAGGTGTGATATTTTGCAATCACAA
GATGGTCCTTCTTGTTCTAAACTTTCACACATTAAAAGTTATAAGGTGAT
TTATGTTCGTTTTATTACAAATGTGAATCAAGCATCCATTTCCATAAGAA
AGTATTTCGATAAGATGAAGATGCCACCTCGCAGCCCTTTATCCTCAATG
AACGTTTTAAACTCTTCTGCAGTATCAACACCAAGCAAATCCATTAAGCT
TCAAATACCTCAAAAGCAAAAGCCTGTCCAAACTACTCAATATCCAAAAA
GCTTGTCCATCTCAAACATGCTTCAATTTGGAACAGCAataacaaaaatg
caaaatccaCCCGTGGAAATTGAGCTCCAAGAAATTGACGTTTCAGCTAT
GAAATGGAGCTATCCaacatcaaaaagattttctatctCGGAGACTCCTC
TTACCAAAGGTGGATTTAGGGAAGTGTCTGAAGCCATCGATGTGgacaca
aaaaagaaatttgttgtGAAAACCTTCCTTCCAGAAGTTTTCAAAGTAAT
GGAAGAAGTGAATACTGTTATTCCACTTAATAAAGAAAGTGAGGAGTCTC
TATCAAAAAAGGCCATACAAGCCCATGCCCTAGCTAAAAATGTCACcgat
tcattgaaaaaattatgCTTCAATAATAACTTAATGGACGATTTTGGGGA
GTTTTTTACATATAATAAAGCGTACTTAGGATCAAAGGTGATGCACGgtg
gagagaaaaaaattgtcatggTGGAAGAGTACGTTGATGGAGAATTTatt
aaatttatcaacaatGATGGCAAAATCATTCATGGTCAGCCAAAAGATCT
GGACCGTTTACTGAAAGCCCAATGTCTTGCCCACTACTCACTCGTGAAAT
CTGGGCAAAGGTTTATGATTGTTGACATCCAAGGTTCAGGTTATACACTT
TACGATCCTGAAATTGCTACGACTGGTGATGCTATAGAAAATGAGCGTTT
AAACTTTAATCTTGGCAATTTGTCCAAAGCTGCAATTGATTTGTTTATCA
TTGCTCATGTTTGCAATAGATTCTGTAAACTTGTTGGGCTGGAGCAACCT
CCTTCCTCAAAGATCGACTTGTCAAAATAA Coding sequence (CDS) from alignment at sc0000261_pilon:81526..83405+ >XLOC_040872 ID=XLOC_040872|Name=XLOC_040872|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2952bp|location=Sequence derived from alignment at sc0000261_pilon:81526..83405+ (Clytia hemisphaerica_ch_hm2_pilon)
atggtagactttgTATGGTGTCGCATCatggtagactttgTATGGTGTCG
CATCAATTGTCGACTTATATATCTAAAAATTTCCcccttgttttttcttt
tgcagaTGGCTACTAACAATGACAGAAAACTTTGGGAAGAACgtgcacaa
aaactgaaaaggaAGAGAATGGGTCAGGACACAGTGAAGGGTGATAAAGC
TGGTGCTGTTGGTTCTCATATTTTAGCCGAGAGAGAAAGGACTGTTCAAC
GTCTTTCTAGTGTTGCTACTGGGAAAGCAatgaaattcaataaaatgggg
CCTCAGGAATTCGTGGCCTATCCATTTGATGAATTGACAATCGAAAATTT
GATTCAAGCGTGCAGTGCACATTTTCGAGATGAATTGCTTGACAATCAAA
GGTGTGATATTTTGCAATCACAAGATGGTCCTTCTTGTTCTAAACTTTCA
CACATTAAAAGTTATAAGGTGATTTATGTTCGTTTTATTACAAATGTGAA
TCAAGCATCCATTTCCATAAGAAAGTATTTCGATAAGATGAAGATGCCAC
CTCGCAGCCCTTTATCCTCAATGAACGTTTTAAACTCTTCTGCAGTATCA
ACACCAAGCAAATCCATTAAGCTTCAAATACCTCAAAAGCAAAAGCCTGT
CCAAACTACTCAATATCCAAAAAGCTTGTCCATCTCAAACATGCTTCAAT
TTGGAACAGCAataacaaaaatgcaaaatccaCCCGTGGAAATTGAGCTC
CAAGAAATTGACGTTTCAGCTATGAAATGGAGCTATCCaacatcaaaaag
attttctatctCGGAGACTCCTCTTACCAAAGGTGGATTTAGGGAAGTGT
CTGAAGCCATCGATGTGgacacaaaaaagaaatttgttgtGAAAACCTTC
CTTCCAGAAGTTTTCAAAGTAATGGAAGAAGTGAATACTGTTATTCCACT
TAATAAAGAAAGTGAGGAGTCTCTATCAAAAAAGGCCATACAAGCCCATG
CCCTAGCTAAAAATGTCACcgattcattgaaaaaattatgCTTCAATAAT
AACTTAATGGACGATTTTGGGGAGTTTTTTACATATAATAAAGCGTACTT
AGGATCAAAGGTGATGCACGgtggagagaaaaaaattgtcatggTGGAAG
AGTACGTTGATGGAGAATTTattaaatttatcaacaatGATGGCAAAATC
ATTCATGGTCAGCCAAAAGATCTGGACCGTTTACTGAAAGCCCAATGTCT
TGCCCACTACTCACTCGTGAAATCTGGGCAAAGGTTTATGATTGTTGACA
TCCAAGGTTCAGGTTATACACTTTACGATCCTGAAATTGCTACGACTGGT
GATGCTATAGAAAATGAGCGTTTAAACTTTAATCTTGGCAATTTGTCCAA
AGCTGCAATTGATTTGTTTATCATTGCTCATGTTTGCAATAGATTCTGTA
AACTTGTTGGGCTGGAGCAACCTCCTTCCTCAAAGATCGACTTGTCAAAA
TAAAATTGTCGACTTATATATCTAAAAATTTCCcccttgttttttctttt
gcagaTGGCTACTAACAATGACAGAAAACTTTGGGAAGAACgtgcacaaa
aactgaaaaggaAGAGAATGGGTCAGGACACAGTGAAGGGTGATAAAGCT
GGTGCTGTTGGTTCTCATATTTTAGCCGAGAGAGAAAGGACTGTTCAACG
TCTTTCTAGTGTTGCTACTGGGAAAGCAatgaaattcaataaaatggggC
CTCAGGAATTCGTGGCCTATCCATTTGATGAATTGACAATCGAAAATTTG
ATTCAAGCGTGCAGTGCACATTTTCGAGATGAATTGCTTGACAATCAAAG
GTGTGATATTTTGCAATCACAAGATGGTCCTTCTTGTTCTAAACTTTCAC
ACATTAAAAGTTATAAGGTGATTTATGTTCGTTTTATTACAAATGTGAAT
CAAGCATCCATTTCCATAAGAAAGTATTTCGATAAGATGAAGATGCCACC
TCGCAGCCCTTTATCCTCAATGAACGTTTTAAACTCTTCTGCAGTATCAA
CACCAAGCAAATCCATTAAGCTTCAAATACCTCAAAAGCAAAAGCCTGTC
CAAACTACTCAATATCCAAAAAGCTTGTCCATCTCAAACATGCTTCAATT
TGGAACAGCAataacaaaaatgcaaaatccaCCCGTGGAAATTGAGCTCC
AAGAAATTGACGTTTCAGCTATGAAATGGAGCTATCCaacatcaaaaaga
ttttctatctCGGAGACTCCTCTTACCAAAGGTGGATTTAGGGAAGTGTC
TGAAGCCATCGATGTGgacacaaaaaagaaatttgttgtGAAAACCTTCC
TTCCAGAAGTTTTCAAAGTAATGGAAGAAGTGAATACTGTTATTCCACTT
AATAAAGAAAGTGAGGAGTCTCTATCAAAAAAGGCCATACAAGCCCATGC
CCTAGCTAAAAATGTCACcgattcattgaaaaaattatgCTTCAATAATA
ACTTAATGGACGATTTTGGGGAGTTTTTTACATATAATAAAGCGTACTTA
GGATCAAAGGTGATGCACGgtggagagaaaaaaattgtcatggTGGAAGA
GTACGTTGATGGAGAATTTattaaatttatcaacaatGATGGCAAAATCA
TTCATGGTCAGCCAAAAGATCTGGACCGTTTACTGAAAGCCCAATGTCTT
GCCCACTACTCACTCGTGAAATCTGGGCAAAGGTTTATGATTGTTGACAT
CCAAGGTTCAGGTTATACACTTTACGATCCTGAAATTGCTACGACTGGTG
ATGCTATAGAAAATGAGCGTTTAAACTTTAATCTTGGCAATTTGTCCAAA
GCTGCAATTGATTTGTTTATCATTGCTCATGTTTGCAATAGATTCTGTAA
ACTTGTTGGGCTGGAGCAACCTCCTTCCTCAAAGATCGACTTGTCAAAAT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000261_pilon | genome | sc0000261_pilon:81526..83405 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 28-1476:432 |
| Aaloc | 1-27:1 |
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