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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000163_pilon:207004..211329- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040867 ID=XLOC_040867|Name=XLOC_040867|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4326bp|location=Sequence derived from alignment at sc0000163_pilon:207004..211329- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGATTCGTATTACCTCAAAAGGAAATAAAACGCAGCAAGGGGATAA
TATTAATGGTTGTTTGTGTAAGCATAAAGGAAAGGTATGTGTTATCATTT
ATTATCAATCTAAAAATATTTAACATTAGGAATCGAAAAGACTTCCATAA
AAAGTTTAAACATAACCCATGCTAAAATAGACCTTTAGGTGAACTCAACG
GTCTATTGAATAGCAAATTAGTACATACAGAAGTAAGCTAATATTGGTCT
ATTTATTCATTGTCCTTGATCTGATTGCTTGGTACCAAACAAATAAGACT
TCATATATGTTCATATATGTTTATCATTCTAGATACAGCCAACACCAGAG
GAGGACACTAAATGTGTTCCGAAAACGTATTCAAACAGATATGGTGCTTT
GTTTTTATTTGCAAACACTTATCATTCTTGGACTGAAAGAAAACAACCAA
GGAAAATGAATCTGACCAGAGATTTGAAAACTTTGAGGAATTTTAGATCA
CTGATCTTACAATTTGGTGTGGTGAGTGATCATTAGCAATGATCATTAAC
AAAATATTGTGGCGTTTTTCTAGCCATCAGATAGAACATAAAGTTTTGAG
CAAAAAGTATACTACAACAAGTCTTATACTCGAACAGACAAAAAGATATG
GTCATCTTAACGTTCGAGATCCTGTGAAATCTGTTACGTTTTAGAAAAGG
TTTGACGTCTATCGTACACTCTAACTGACAGAATTTTGAACTTCAAAAGC
TTGTATTTCTTTACATGTTTTCTTTAGACGACTTGTTGTAGTATTATGGC
ATTATTCTAGCTGTTTAACTCCATAGATTTATAAAGCCCGAAGGGCTAGA
TGCCGTGCTTTAATTTTTATTTGCGATGTTAGCTTTTTTAGGCTTATGCA
AATAAATGGATAGAAATAGAAATTTAAGCCATCGCAGGCAAAAAAAATTG
AACATCGGAAAAATATTGTTGCTATTGTTTTCGAAAATCCGCGAAGCTTC
TGATTAGTGAAGCGCTGAAATTCTATTGTAATGTAATGTCACGTTAGTGA
CCTAGGTAGGATTTCCTACCTAACCACGGCACATTTTTCAGAAAAAGTAC
GCCATCTAGCCCTTCGGGCTTTATAAATCTATTTTTAACTCCAGTTCAAG
ACATTACTTCCGCTCTCCGAGCAATGCTGTTTAAAAAAAGAAAGATGGCT
TCAGTGGGTTAAATTCAGCCGGAACAACATTGTTTGGAGGGTGGAGGAGG
GGGATGCTCATTTTCCTGGCTTTGTGCAATAAGTTTTTTGTCAATGATTA
TAGTTTTTAAAATTTGCTAAGATTTTTTGGGAACGTTTTGTTAAAGTTCT
ATACCCTAACTTGTGACTGGCGACCGGAGGGGTTTCAATTTTACTTAAAT
AGAGAAGGAAATATACTTATTTCTAATCTGATAGAGATGCTAGAAAACTA
TTTTGATTTTGATTACCATAATAAGCTTAAAACAGTTCTGAATTAGATTG
AAATAAGTACCCTTTATAAGAATCCTTGTAATTCTGATGAATTTACGTAA
GTAGTAACCTTTCATAAGTTTGCTTTTGATAAATTTTGTTCTTATTATTA
AAATATTGATACAAAATTATTTAATCCAATTTCCTTTACTTTTTTGTAGG
ATGACACGGCATTTTTAAAAGGCGTTACAGACATTATAAGAAAGGATTCA
TCGTCAAACCGTCCACAGAATGGATTAACTTTATCCTCAAATAAAACATG
GGAACCAGACAAATGGACAAACCCAAATGAAATTTCCAAAAGCCTTCTCA
ATCGTTATTTTTATTCAGTATTACCAGCTGTACATCATAAAATGGCTAAT
GGACTTAGTAATAATTCCGATGAGACCGAATCTCGTAATAGTAATAAATA
TAGAAGACTGTCACTTCATTTGAATAAAATATCCCTCAAGAAACACCGCT
CAAAGGGAAACATATTTCCACCCATACAACAAGATACCAACACAATACAC
GCTTATAACAACCATAATATAACTTACTCAGATACACAAACACAAGCTAG
ATCGCATTCAGATCATGCAAAGATTTCATATTCAACTTTTGACTTTTCGA
CAACAAGTAGTAATAACACAAATCATAACAACAAAATTTATAAAAACAGA
ATAGGTCACGAAACCCTTATAACAACCCATGAACAAGAAAAAACAAAACC
GCAGCAATCGTTTAATATTGATACACGCGAAGAGAAAGTTAAATCGAAAA
CTTGTCCAAATACACCTCGATCAAATCATAGAAGTCAAAATAATGCACCC
ACTTTAAATCATATCGATGTCAAATTTTTACAAAATCGCCATAAGCAAAA
AAGTGCTAAATCAGTGACAACACCTTATTACCTAACAGATAATTCACATA
AACAATACTTTGCCGAAGATGAGTATATACAGACATCGGAACCAAGATTT
GCATACCGTGCTAATGCGTTATCCACGAATAAAAATCCAGTCAGTAAACC
ACAAACACCTGAACTAATCACCAAAGATAAAGTTATCACACGGAATCGAA
ACTTAAGTGTATGTGGCAACAGTCTACCTTCAATATTCAATTCATCTAAT
TCATACGTTAGTAAGCAAGATCTTGATATCTTAGAACTTGAATCTCCAAT
TATGTCACCTTCTCCTCGATCCAAATACCAATCTATAGATTCTGGTTGGG
AGTCGATGGATCAGTCTATGGAACTCGAACAAAATAATGGAGTTATATCA
GATATTCCTAAAGAGATTACTGATCCTTCAAATGATTGCAATGAAACTTC
TTCCCACAACAATGAAGTTCAACTTGATAAAGATGCACATTTACCTGATA
TCAAATCAAACAATAATTTCGGTGATGAAAACAAGAACTATACTTCAAAA
AGCCAAAACATAGATGAAAAGTCTTCTCGTCTCCCACCTATCACAAAAGC
GAGAAACGTTTACCAAGATTCTATCCACAGGTTTTCACCACCATCGGATA
TAAATGATAATGACATTCTGAATGCTGAAGATCTCTCCGGTGAATGTAGT
AAAGTAACCGAACATCCAGATTCTCAATCAAATAGGGCTGAAGATTTACT
AAATACTGTAGACCAAACAAACGAATTTTTACCAACGATTAAAGGGAAAC
CAAACAATGATCAGTCACGCACAAAGTCTTTGGAGAACGCTGACATCTTT
GATCTCACCGATGAAGATGTACCAAACATTACTAACCATAAAGAAGATAA
TGCGCAAAGAAATGATACATTCATCTTACCAACATTGTCAACTGATGTTA
AAGTGCAATCTAAAGTTCTAAAAGGTTTGAAATATTTCTTTGTTTTTTTG
TCAGTTGTCAGAAAAGTTAGATATTCGATGGCTTTAGAAAATGAAACGTT
TTGGCACTCTCAGATGCATAATGAACAAGGGATTGAATAAACGAGACGGG
GCTTCAATTTCAATAGCAGGAGAACTTATTGTTTCCGGAGGGTTGTAATT
TGTACCTTTAAATACCCTCAAAATGGTGAATATGGATAAAACCAGGCTAT
TTAGAGATAAATAAGGGACTCTTCTTTTGACAGCCAAAAACTATTTCCAA
AATTTGATAAACGACGGTGATCCAAATAAGTGCTGGGAGTTTGGAATAAA
ATCAAAAGATTAACAAGAGGGACGTCTATTAGGCAGCTGAGAGTACTTGC
GCTACGACGTTTATGTTTTAATCCTCGGTTTTTGGCTCATATTAATAAGT
GGTTAATCATTTAAAATTCATTCGTTGCAGGTACCACAACATCATCTGAA
ATCAAAGTCGGAAACAAACAAAGCCTATCTAATCAGCCAGCAGATAAAAA
CAGTCCTCCGATGAATAAATTAACAGGTCAAGGAAATGACAACAATGTGG
TAAAAACCGGTATCACCACAAATGAGATGGATAAAGGGATTGATATTGCC
TCAGGTAAACAAACCATATGTTTTCTTCATTTTGTATAGTTAAAGAAATA
TATTTCTCTAGTGCAAGTTTTCGTAAATTCAAACGAAATTTTAATACCAC
ATTTCTTAAAATTCCTTTCTAGCCGAAACCAAAGACCCTAAACCAAAGAA
ACACAAAACAAAGACAAACAACACCAAAGAGAAAACAAAGTCCAAAACAA
AAATGAAAAACAAAGCTGCATCGATCAAAAAGGCAAAACATAGTAGCAAA
CAATCCTCACAAAATTTCGATATTAACTACTTGCTTAACGAGACTCAGAC
GAAGCCGGATGTTCAAATTTTTAATAAGAAGAAGACCAACAAAAACAAAT
CTGCCAATAAAAAGAAACAGCCTTTG Coding sequence (CDS) from alignment at sc0000163_pilon:207004..211329- >XLOC_040867 ID=XLOC_040867|Name=XLOC_040867|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4752bp|location=Sequence derived from alignment at sc0000163_pilon:207004..211329- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGATTCGTATTACCTCAAAAGGAAATAAAACGCAGCAAGGGGATAA
TATTAATGGTTGTTTGTGTAAGCATAAAGGAAAGATGGAGATTCGTATTA
CCTCAAAAGGAAATAAAACGCAGCAAGGGGATAATATTAATGGTTGTTTG
TGTAAGCATAAAGGAAAGATACAGCCAACACCAGAGGAGGACACTAAATG
TGTTCCGAAAACGTATTCAAACAGATATGGTGCTTTGTTTTTATTTGCAA
ACACTTATCATTCTTGGACTGAAAGAAAACAACCAAGGAAAATGAATCTG
ACCAGAGATTTGAAAACTTTGAGGAATTTTAGATCACTGATCTTACAATT
TGGTGTGATACAGCCAACACCAGAGGAGGACACTAAATGTGTTCCGAAAA
CGTATTCAAACAGATATGGTGCTTTGTTTTTATTTGCAAACACTTATCAT
TCTTGGACTGAAAGAAAACAACCAAGGAAAATGAATCTGACCAGAGATTT
GAAAACTTTGAGGAATTTTAGATCACTGATCTTACAATTTGGTGTGGATG
ACACGGCATTTTTAAAAGGCGTTACAGACATTATAAGAAAGGATTCATCG
TCAAACCGTCCACAGAATGGATTAACTTTATCCTCAAATAAAACATGGGA
ACCAGACAAATGGACAAACCCAAATGAAATTTCCAAAAGCCTTCTCAATC
GTTATTTTTATTCAGTATTACCAGCTGTACATCATAAAATGGCTAATGGA
CTTAGTAATAATTCCGATGAGACCGAATCTCGTAATAGTAATAAATATAG
AAGACTGTCACTTCATTTGAATAAAATATCCCTCAAGAAACACCGCTCAA
AGGGAAACATATTTCCACCCATACAACAAGATACCAACACAATACACGCT
TATAACAACCATAATATAACTTACTCAGATACACAAACACAAGCTAGATC
GCATTCAGATCATGCAAAGATTTCATATTCAACTTTTGACTTTTCGACAA
CAAGTAGTAATAACACAAATCATAACAACAAAATTTATAAAAACAGAATA
GGTCACGAAACCCTTATAACAACCCATGAACAAGAAAAAACAAAACCGCA
GCAATCGTTTAATATTGATACACGCGAAGAGAAAGTTAAATCGAAAACTT
GTCCAAATACACCTCGATCAAATCATAGAAGTCAAAATAATGCACCCACT
TTAAATCATATCGATGTCAAATTTTTACAAAATCGCCATAAGCAAAAAAG
TGCTAAATCAGTGACAACACCTTATTACCTAACAGATAATTCACATAAAC
AATACTTTGCCGAAGATGAGTATATACAGACATCGGAACCAAGATTTGCA
TACCGTGCTAATGCGTTATCCACGAATAAAAATCCAGTCAGTAAACCACA
AACACCTGAACTAATCACCAAAGATAAAGTTATCACACGGAATCGAAACT
TAAGTGTATGTGGCAACAGTCTACCTTCAATATTCAATTCATCTAATTCA
TACGTTAGTAAGCAAGATCTTGATATCTTAGAACTTGAATCTCCAATTAT
GTCACCTTCTCCTCGATCCAAATACCAATCTATAGATTCTGGTTGGGAGT
CGATGGATCAGTCTATGGAACTCGAACAAAATAATGGAGTTATATCAGAT
ATTCCTAAAGAGATTACTGATCCTTCAAATGATTGCAATGAAACTTCTTC
CCACAACAATGAAGTTCAACTTGATAAAGATGCACATTTACCTGATATCA
AATCAAACAATAATTTCGGTGATGAAAACAAGAACTATACTTCAAAAAGC
CAAAACATAGATGAAAAGTCTTCTCGTCTCCCACCTATCACAAAAGCGAG
AAACGTTTACCAAGATTCTATCCACAGGTTTTCACCACCATCGGATATAA
ATGATAATGACATTCTGAATGCTGAAGATCTCTCCGGTGAATGTAGTAAA
GTAACCGAACATCCAGATTCTCAATCAAATAGGGCTGAAGATTTACTAAA
TACTGTAGACCAAACAAACGAATTTTTACCAACGATTAAAGGGAAACCAA
ACAATGATCAGTCACGCACAAAGTCTTTGGAGAACGCTGACATCTTTGAT
CTCACCGATGAAGATGTACCAAACATTACTAACCATAAAGAAGATAATGC
GCAAAGAAATGATACATTCATCTTACCAACATTGTCAACTGATGTTAAAG
TGCAATCTAAAGTTCTAAAAGGATGACACGGCATTTTTAAAAGGCGTTAC
AGACATTATAAGAAAGGATTCATCGTCAAACCGTCCACAGAATGGATTAA
CTTTATCCTCAAATAAAACATGGGAACCAGACAAATGGACAAACCCAAAT
GAAATTTCCAAAAGCCTTCTCAATCGTTATTTTTATTCAGTATTACCAGC
TGTACATCATAAAATGGCTAATGGACTTAGTAATAATTCCGATGAGACCG
AATCTCGTAATAGTAATAAATATAGAAGACTGTCACTTCATTTGAATAAA
ATATCCCTCAAGAAACACCGCTCAAAGGGAAACATATTTCCACCCATACA
ACAAGATACCAACACAATACACGCTTATAACAACCATAATATAACTTACT
CAGATACACAAACACAAGCTAGATCGCATTCAGATCATGCAAAGATTTCA
TATTCAACTTTTGACTTTTCGACAACAAGTAGTAATAACACAAATCATAA
CAACAAAATTTATAAAAACAGAATAGGTCACGAAACCCTTATAACAACCC
ATGAACAAGAAAAAACAAAACCGCAGCAATCGTTTAATATTGATACACGC
GAAGAGAAAGTTAAATCGAAAACTTGTCCAAATACACCTCGATCAAATCA
TAGAAGTCAAAATAATGCACCCACTTTAAATCATATCGATGTCAAATTTT
TACAAAATCGCCATAAGCAAAAAAGTGCTAAATCAGTGACAACACCTTAT
TACCTAACAGATAATTCACATAAACAATACTTTGCCGAAGATGAGTATAT
ACAGACATCGGAACCAAGATTTGCATACCGTGCTAATGCGTTATCCACGA
ATAAAAATCCAGTCAGTAAACCACAAACACCTGAACTAATCACCAAAGAT
AAAGTTATCACACGGAATCGAAACTTAAGTGTATGTGGCAACAGTCTACC
TTCAATATTCAATTCATCTAATTCATACGTTAGTAAGCAAGATCTTGATA
TCTTAGAACTTGAATCTCCAATTATGTCACCTTCTCCTCGATCCAAATAC
CAATCTATAGATTCTGGTTGGGAGTCGATGGATCAGTCTATGGAACTCGA
ACAAAATAATGGAGTTATATCAGATATTCCTAAAGAGATTACTGATCCTT
CAAATGATTGCAATGAAACTTCTTCCCACAACAATGAAGTTCAACTTGAT
AAAGATGCACATTTACCTGATATCAAATCAAACAATAATTTCGGTGATGA
AAACAAGAACTATACTTCAAAAAGCCAAAACATAGATGAAAAGTCTTCTC
GTCTCCCACCTATCACAAAAGCGAGAAACGTTTACCAAGATTCTATCCAC
AGGTTTTCACCACCATCGGATATAAATGATAATGACATTCTGAATGCTGA
AGATCTCTCCGGTGAATGTAGTAAAGTAACCGAACATCCAGATTCTCAAT
CAAATAGGGCTGAAGATTTACTAAATACTGTAGACCAAACAAACGAATTT
TTACCAACGATTAAAGGGAAACCAAACAATGATCAGTCACGCACAAAGTC
TTTGGAGAACGCTGACATCTTTGATCTCACCGATGAAGATGTACCAAACA
TTACTAACCATAAAGAAGATAATGCGCAAAGAAATGATACATTCATCTTA
CCAACATTGTCAACTGATGTTAAAGTGCAATCTAAAGTTCTAAAAGGTAC
CACAACATCATCTGAAATCAAAGTCGGAAACAAACAAAGCCTATCTAATC
AGCCAGCAGATAAAAACAGTCCTCCGATGAATAAATTAACAGGTCAAGGA
AATGACAACAATGTGGTAAAAACCGGTATCACCACAAATGAGATGGATAA
AGGGATTGATATTGCCTCAGGTACCACAACATCATCTGAAATCAAAGTCG
GAAACAAACAAAGCCTATCTAATCAGCCAGCAGATAAAAACAGTCCTCCG
ATGAATAAATTAACAGGTCAAGGAAATGACAACAATGTGGTAAAAACCGG
TATCACCACAAATGAGATGGATAAAGGGATTGATATTGCCTCAGCCGAAA
CCAAAGACCCTAAACCAAAGAAACACAAAACAAAGACAAACAACACCAAA
GAGAAAACAAAGTCCAAAACAAAAATGAAAAACAAAGCTGCATCGATCAA
AAAGGCAAAACATAGTAGCAAACAATCCTCACAAAATTTCGATATTAACT
ACTTGCTTAACGAGACTCAGACGAAGCCGGATGTTCAAATTTTTAATAAG
AAGAAGACCAACAAAAACAAATCTGCCAATAAAAAGAAACAGCCTTTGCC
GAAACCAAAGACCCTAAACCAAAGAAACACAAAACAAAGACAAACAACAC
CAAAGAGAAAACAAAGTCCAAAACAAAAATGAAAAACAAAGCTGCATCGA
TCAAAAAGGCAAAACATAGTAGCAAACAATCCTCACAAAATTTCGATATT
AACTACTTGCTTAACGAGACTCAGACGAAGCCGGATGTTCAAATTTTTAA
TAAGAAGAAGACCAACAAAAACAAATCTGCCAATAAAAAGAAACAGCCTT
TG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000163_pilon | genome | sc0000163_pilon:207004..211329 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2173-2397:226 |
| Aaloc | 2131-2157:253 |
| Aaloc | 2044-2127:458 |
| Aaloc | 1951-2037:545 |
| Aaloc | 274-1947:2678 |
| Aaloc | 85-273:3995 |
| Aaloc | 1-84:4327 |
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