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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:957736..960439+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040858 ID=XLOC_040858|Name=XLOC_040858|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2704bp|location=Sequence derived from alignment at sc0000081_pilon:957736..960439+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATCGATTGGTTTGATGACTGTAATCTAAAAACCGACCTTCTGAA
ATATGTCAAGCAAAATATGAAACGAAGTGAAATTTTGGACTATGTTGAAC
GAGATTTCCCCATGTACAATTGGAGCTTGAGAACTTTAGATAGAAGGCTT
AGAGGCTTTGATATTTATTATAATGATTTCAGTCTAAATGTAGAAGAGGT
TGAAACTATTCTACGCCAAGAACTGAACGGACCTGGAAAATTACTTGGGT
ATCGTGCAATGCATCTCAAGTTGCGACAAAAATACGATATAAAAATACCG
CGTGATTACGTATACGAGTTGATGCACGAAATAAACCCAGAGCTGATGAA
GGACAGACAGCCttgcttaaaaaagaaaaaaaagcgaAAACACTTTGTGA
CGAAAGGACCAGACTGGGTTTTTTCGCTGGACGGGCATGATAAATTAATG
GGTTACCAAAACTCGACATTCCCCCTGGCAATTTATGGCTGTATAGACAC
AGCGAGTAGAAAGATAATGTTTCTCAAAGTCTGGGTTACGAACtcaaaac
cacaagtgattggCCGATGGTATACTGAATTTCTACGTGAAAATCAAATT
GTCCCAGAATATTTAAGAATTGATAAGGGAACTGAGACCACGACCATGGC
CGAGATTCACTGTCATCTAAGACAAGAACATGGTGACTTAGAAGACTCGA
CATCATCAATTATATTTGGCCCTTCGACATCTAATCAGGCATGTTATTTA
TAATCTgaagtttttttctcttttaacacactaaatctttctcttttaaa
aACTATTTACAAGATCAAAACTTTTCATAAGTAAAATATCACCATGCAAT
ATCACCAGTACAAGGAATTTTCAGGGAATAATTGCTAACTGATTTCTATG
ATTTTGATATAACAGATTGAACGTTGGTGGAGAGAGCTCCATGATCGTTT
GGAGAAGTTTTTCAAAGCTGGTCTTTCCTGGCTTAAAGACGAAAATCACT
ACGACCCTCATTGTGCACAAGATAGGTTAGTTGTTAAAGTAAATTTAATC
TACATAGAAATAtacacttttaaaaaaattgacctcTTAAAAAAGATATG
CCAAAATGTAATATCTGCTTGTTTGTTAACCCTAtctgccgggggggggg
ggggtcttggtttttttCTCCTTTGAATTTTAACCGCTTGCccaattctt
ttcaaatttcttgaCTTCTCTACAAATTCAAATATTACAGTCTGAGTGGC
TGCAGATTCAACGATAACCGCCCaaaatgcaaaatttaaaaaaaatattt
ttaaaattttaaattactataaaatCTGAACCACTAATAACTGCCCATTT
ATGAGTAACTACAGAAAACAGAAGTAAAAAAGCTTATTTCTACAAAGATC
tgtctttttgaaaatacaGCCTAGTATTTTCCTCCATTCCGGTCAAtttt
tttGGCATGTGAAAATGACCCAAATaaaggaaaatttggaaaaaaatgtg
caAACTTCTTTGTATACAAAGTCTCTATGTACCAAATTCATGCCAAAACA
GTCTTGAGTTTGGGGGTTCCGGGAAGCCCCTCCCCGGGCAACACCAGACC
CCAAATAACCCAGGGCAGATAGGGttaaagtgaaataaaaataataaaaa
tagctaaaaaataaaaaatagctgagtaactaaaaaaaatagaccttaaa
ataaatGTTGTATCTACTCGTTTGTCgaacttaaataaaaaaagctaaat
aattgaaagtaaaagctaaaaacaaatcgaaaacagttgtcaaaactaaa
aagccaactgaagaacaaaataaaacaacaataaGACCAAGAAGaataaa
ttttccattttttagagATATGTTGGCATTTGTTATGGTTCCCTTGGTTC
AAAGACATTTGGACGAATTCAAAGATCTCATTTGGAACCCCCACAGAATA
AGACACCAAAGAGACACATACATGGCTGATGGAGTACCAAACCATATGTA
TGATTTTCCCGCCAAATACTCGATGGAACAATGTGGTATGTGCTTTTATt
cacttttcagaaaaattataTTCTCTAGTATCCTTTAAGGGTACTCTTTT
GTGTCTAATTGTAGGGGGGTTTAATAAGCGGAGGGGATGGGTGGTCTGGG
aaaaaaaTCCacaaaatggggggggggggtgacaaTAAAGTGATATTGGA
GtgattttagtgattttccctaggaaaatgaaggtttttggcaCTTTTAG
GCAATATCAAGTCAAAAAGTCGTAAAATGAgggggggTCATAATAAAGTG
AGATTGGGggtgaaaaatcagaaaaattacaaagtgaCCCCCCTACCTGC
CCCTACAATTAGGGACAAAAGAGTACAAACTtttatagaaactttttttc
gcggtttttggCCTAACTGTAAAATTTATATGAGAAAAGTTATTGTGAAA
TAATCCATACACCCATATCAAATCGgcaataactttttaaaatccCTTAA
CACAGTTTAACATTTCACATTTTAGGAAAACCACTCAACAAAGACACACT
TGATGAAGCTGTTCAAATTACAGGAGTTATGGATTATGGAATTGACTTTC
TTCTCCCAGATCAACGAAACCATTACCAGCAGTTCGTGAAAAATACTGTT
ACAGAATCTAATTATGTTCAAAGTTATCTAGATCTTAAATATAATCAAGC
TTAG Coding sequence (CDS) from alignment at sc0000081_pilon:957736..960439+ >XLOC_040858 ID=XLOC_040858|Name=XLOC_040858|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2394bp|location=Sequence derived from alignment at sc0000081_pilon:957736..960439+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATCGATTGGTTTGATGACTGTAATCTAAAAACCGACCTTCTGAA
ATATGTCAAGCAAAATATGAAACGAAGTGAAATTTTGGACTATGTTGAAC
GAGATTTCCCCATGTACAATTGGAGCTTGAGAACTTTAGATAGAAGGCTT
AGAGGCTTTGATATTTATTATAATGATTTCAGTCTAAATGTAGAAGAGGT
TGAAACTATTCTACGCCAAGAACTGAACGGACCTGGAAAATTACTTGGGT
ATCGTGCAATGCATCTCAAGTTGCGACAAAAATACGATATAAAAATACCG
CGTGATTACGTATACGAGTTGATGCACGAAATAAACCCAGAGCTGATGAA
GGACAGACAGCCttgcttaaaaaagaaaaaaaagcgaAAACACTTTGTGA
CGAAAGGACCAGACTGGGTTTTTTCGCTGGACGGGCATGATAAATTAATG
GGTTACCAAAACTCGACATTCCCCCTGGCAATTTATGGCTGTATAGACAC
AGCGAGTAGAAAGATAATGTTTCTCAAAGTCTGGGTTACGAACtcaaaac
cacaagtgattggCCGATGGTATACTGAATTTCTACGTGAAAATCAAATT
GTCCCAGAATATTTAAGAATTGATAAGGGAACTGAGACCACGACCATGGC
CGAGATTCACTGTCATCTAAGACAAGAACATGGTGACTTAGAAGACTCGA
CATCATCAATTATATTTGGCCCTTCGACATCTAATCAGATGGAAATCGAT
TGGTTTGATGACTGTAATCTAAAAACCGACCTTCTGAAATATGTCAAGCA
AAATATGAAACGAAGTGAAATTTTGGACTATGTTGAACGAGATTTCCCCA
TGTACAATTGGAGCTTGAGAACTTTAGATAGAAGGCTTAGAGGCTTTGAT
ATTTATTATAATGATTTCAGTCTAAATGTAGAAGAGGTTGAAACTATTCT
ACGCCAAGAACTGAACGGACCTGGAAAATTACTTGGGTATCGTGCAATGC
ATCTCAAGTTGCGACAAAAATACGATATAAAAATACCGCGTGATTACGTA
TACGAGTTGATGCACGAAATAAACCCAGAGCTGATGAAGGACAGACAGCC
ttgcttaaaaaagaaaaaaaagcgaAAACACTTTGTGACGAAAGGACCAG
ACTGGGTTTTTTCGCTGGACGGGCATGATAAATTAATGGGTTACCAAAAC
TCGACATTCCCCCTGGCAATTTATGGCTGTATAGACACAGCGAGTAGAAA
GATAATGTTTCTCAAAGTCTGGGTTACGAACtcaaaaccacaagtgattg
gCCGATGGTATACTGAATTTCTACGTGAAAATCAAATTGTCCCAGAATAT
TTAAGAATTGATAAGGGAACTGAGACCACGACCATGGCCGAGATTCACTG
TCATCTAAGACAAGAACATGGTGACTTAGAAGACTCGACATCATCAATTA
TATTTGGCCCTTCGACATCTAATCAGATTGAACGTTGGTGGAGAGAGCTC
CATGATCGTTTGGAGAAGTTTTTCAAAGCTGGTCTTTCCTGGCTTAAAGA
CGAAAATCACTACGACCCTCATTGTGCACAAGATAGATTGAACGTTGGTG
GAGAGAGCTCCATGATCGTTTGGAGAAGTTTTTCAAAGCTGGTCTTTCCT
GGCTTAAAGACGAAAATCACTACGACCCTCATTGTGCACAAGATAGagAT
ATGTTGGCATTTGTTATGGTTCCCTTGGTTCAAAGACATTTGGACGAATT
CAAAGATCTCATTTGGAACCCCCACAGAATAAGACACCAAAGAGACACAT
ACATGGCTGATGGAGTACCAAACCATATGTATGATTTTCCCGCCAAATAC
TCGATGGAACAATGTGagATATGTTGGCATTTGTTATGGTTCCCTTGGTT
CAAAGACATTTGGACGAATTCAAAGATCTCATTTGGAACCCCCACAGAAT
AAGACACCAAAGAGACACATACATGGCTGATGGAGTACCAAACCATATGT
ATGATTTTCCCGCCAAATACTCGATGGAACAATGTGGAAAACCACTCAAC
AAAGACACACTTGATGAAGCTGTTCAAATTACAGGAGTTATGGATTATGG
AATTGACTTTCTTCTCCCAGATCAACGAAACCATTACCAGCAGTTCGTGA
AAAATACTGTTACAGAATCTAATTATGTTCAAAGTTATCTAGATCTTAAA
TATAATCAAGCTTAGGAAAACCACTCAACAAAGACACACTTGATGAAGCT
GTTCAAATTACAGGAGTTATGGATTATGGAATTGACTTTCTTCTCCCAGA
TCAACGAAACCATTACCAGCAGTTCGTGAAAAATACTGTTACAGAATCTA
ATTATGTTCAAAGTTATCTAGATCTTAAATATAATCAAGCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:957736..960439 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1021-1197:2528 |
| Aaloc | 850-1017:1867 |
| Aaloc | 739-846:916 |
| Aaloc | 1-738:1 |
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