|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000261_pilon:78261..83405+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040857 ID=XLOC_040857|Name=XLOC_040857|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5145bp|location=Sequence derived from alignment at sc0000261_pilon:78261..83405+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGAGATATTTTCGAGGTGTGTgcgtgaaaaaggtacccttaactTGTTG
CCATCAGTCAGCATCACTTGACTTGCACATACCGACATACATACATACTA
CCCATACACACCCCCAGATTATTTTAGGCTATTAAAAAGGAAGGGATCTG
CAACACAATCCATCAGTCCCATCAAGATGATATAATTTTTTCTCAAGGCA
TCCTCACTCCATGACAGACCACCATAGAATGAATGTTCAATTCACACAGC
TTCCCTTTATAAACTTTCACCTGGACTCTCCTCCACAGAGTCTAACTaca
ctttttcaaaaactaacCATAGATTTGAAATCAAACCTTCTTTGTATGAA
AGCATACCTAATAAATTCTCAATAgtatagaaatttaaaaaattgaacct
GAGAATTAATCAAATTATTAATTAAAATTGATCACCCTCAGGGATGGAGC
GCACTTTGGTGTGTGCTATGCCAAAATCACATAAATAAAAGagagttcat
tctatggtggtcTATCATGGAGTGAGGATGTCTTGAGAAATGTTTGAAAC
AAATTATGGCATCTTGATGGGACTGTCCATTGATCTGGTTGTCTTACTTa
tctattctcaacttcagttgagttagaatctgagaatgtctacTGTCAGT
CAGTGTTGTGCCTTCAaacaaactttggggcagcctggagacttcaaaaa
tggttggatttggccGAAATTTGATGGTACACAGttgttctttgaaatga
ataCAGCTGggttttttttaggaaaattttgatttttcaggcTGGGAAAC
TGGGTTCCAGTCCCAAAAATGGCCTAAAATGGctgtaaacaaaataaaat
gtttttggtcgggtgaaaattttcttcgtcctCACCTGGCCGCACTGACt
ttttttcgaacattttgaccattttgcaattttgtttatatacaattttc
tatattccaactttttCTACACTTGAGCAATCTAAAACAATCTTTCTGCA
GTTCTAGATTCGTATAGCGCGCTGTGCGCTGCTTCAATTCTTATTTTACC
TATTTCGTTTTTTGAATTTAACCTTTAGACAGCgcgtaattttttttgtt
ttgggcTGGGCCGGCGCGTCATTTTTGGTGATTTGGTGGGGTTTACAAAT
TTGATCATAAACTTAAAACCATTGGTTCAATTTTAAAATCCAACTTAATT
CTTGAGACACACTAAATTTCTCagacatattttttcattcaattttatcc
tatttataaaacaaaaagctatttttagcctttgctttccatttttatac
attttcatttttatatatacatatgttttataAGTAGCGAGAATGGGCAA
CAATTTGCCTCATGATTACTTAATGAATAGATAGATAAAAAGTGAGCCCA
TTTTGGAAAGCTGATGTATATAATTGTCTTTCAAatagatttgaaataat
tcattAATAAGTGCTACACAAAATTTGCCATGAGaccaaaaaaggacaaa
aattcTTATATCACTTTTTAcggtatttttcaaaaccttgTaaaaaaaGT
GGTGCCaggttgtttttataaaattatttttggtacATTTCCTCCTCAAA
CCTTCCCctttcaaaataccaaaaagattTGTCAACATGCAAGCTTTAAA
TGATCCAACTAGACTATAAATTTTGAACTTTAGAGGCCTGCCGCACCGCA
CCTTCCATGACGGACGCGTGGCGTCGACCGTTCCGGCATATAAATATGAA
AGGCAAAATATGGTTTGAAACTGATGTCTAATGCCTGAAATAGTAAAAtg
ctcaggtaagttatggcatgtccaaaaaactgaaaaattaccataatttt
tggagGGCATTAGCTGGCAGAAtctgaccaaacaaatgactcattatgaa
gggtactatgataaAGTTTCTCAGaggatgtgtaacctaattgtttggcg
ctcattttcgcgaaaaacgcAAATATTCCATTATTACgtcataattgatg
acgtcataaaaattgaaaattgaatttctcgagaATGGTTTATCCATAAT
TCACtccaaattttaaacaaagataGGTCTTGGTAAACTCCATCTTTtaa
cgaaaaatttttttttaaattttgatgactttgatgacgtcagcaaaaat
aagcagaattcgaaaattgcaaatttttgatgacgtcatcaaaattttga
aaaatttttaacgtTAAAAGATGGAGTTTACCAAGACCTATCTTTGTTTA
AATTTTGGAGtgaattggataaaccattctcgagaaattcaatttttatg
atGTCATCAATTATGACGTAATAATGGAAAATTTgcgtttttcgcgaaaa
taagcgccaaaacaattaggtaacacatCCTTTGAGAAACTttatcatag
tacccttcataaTCAGTCATTTAAGTTTGGTCAGATTATGCCGGCTAATG
CCCTCCAAAAATTATGGCAATTtttggacatgccataacttacccgagtg
tTATGTTACAATCAATGAATAAGAGTTAAATGTACAACTATCACTCAAAA
CTGGTGCTAAGAACCCCACATAACCCAAGATAAAAACACGGTTCAGCACG
GTTCTGCGaaaagcagcaaaaaatacctcaaaaacccttcaaaaagcccc
ttaaaaaGACCTGTTTCTCACTCCCataacaaaaatcttttaaaaataca
tCATAAAGATGTTCAAATACACTCtaggtttgaaaaatataacattATAG
CACTCGAAATTCATATTTTAGGTAATATCCATTAGAGGTCCTCCAGAACA
GCTTTTCCAAACTTTTTAACTACTAAAACTCTTTTATGCAGCTTAGCTAC
CATCTTTAGGGGATTATTTACAAAGTGGGGCCCAATATTTGGCTCCAATA
GGCCCATTCTGGCGCTAATTGGCCGTTGTAACTACCGAAATCTATTTTCG
ACATCGAAAATTCAATTGCAAAAACATTATGTTTTGGCAATCCGAAATCG
AATTCGATTaccccgattttcggaaaaagtaACCCGATTCggaaaattca
acctttccttCAACCTTTGCcacaaaaatgaagtttatatctGCAACATA
CCCAAAGATATAGCCAATTTAATATGGTAACCAGTTTTGCGTAGATCTAT
GGCATCCGCCAGGTAGACTTGCGTAGATCTACGGCATCCGCCAGGTAGAC
TTGCATAGATCTACGGCATCCGCCGCCTAAAGTTAAAGTTAAATCGgaat
tcaaaaacattaaaaatggtagactttgTATGGTGTCGCATCGTTATACT
TACTTACAGTCAAGGGAGAGAAATCGTGAAATGGaccgaaaaaatctttt
tctgtcCGCCTGCATGACTTCTTTTCTTatcgtcacccggtggaccagaa
acaaaaaattttttagggcCGGCCCTGctggtggaccggaaacaaattTT
TTAGGGTCTGCCCTGTGTCTGGAGACTTAAAAAGtagtcggatttggctg
aaatttggtacagttgttccttgagtgaatacctattggtgtttttttca
tttttgagggGTAAGTTGTAgcgccaaaacgaggcttaaATGTGACTCGG
GGACTCGTTTTTGAGGTTAGAATGAGGTTAAAAAGTCGCTTAGATTTCTA
TAACCATTGCATTTTATTGGTTATATACACAATTTTCTCCAATTGTAATT
GTCGACTTATATATCTAAAAATTTCCcccttgttttttcttttgcagaTG
GCTACTAACAATGACAGAAAACTTTGGGAAGAACgtgcacaaaaactgaa
aaggaAGAGAATGGGTCAGGACACAGTGAAGGGTGATAAAGCTGGTGCTG
TTGGTTCTCATATTTTAGCCGAGAGAGAAAGGACTGTTCAACGTCTTTCT
AGTGTTGCTACTGGGAAAGCAatgaaattcaataaaatggggCCTCAGGA
ATTCGTGGCCTATCCATTTGATGAATTGACAATCGAAAATTTGATTCAAG
CGTGCAGTGCACATTTTCGAGATGAATTGCTTGACAATCAAAGGTGTGAT
ATTTTGCAATCACAAGATGGTCCTTCTTGTTCTAAACTTTCACACATTAA
AAGTTATAAGGTGATTTATGTTCGTTTTATTACAAATGTGAATCAAGCAT
CCATTTCCATAAGAAAGTATTTCGATAAGATGAAGATGCCACCTCGCAGC
CCTTTATCCTCAATGAACGTTTTAAACTCTTCTGCAGTATCAACACCAAG
CAAATCCATTAAGCTTCAAATACCTCAAAAGCAAAAGCCTGTCCAAACTA
CTCAATATCCAAAAAGCTTGTCCATCTCAAACATGCTTCAATTTGGAACA
GCAataacaaaaatgcaaaatccaCCCGTGGAAATTGAGCTCCAAGAAAT
TGACGTTTCAGCTATGAAATGGAGCTATCCaacatcaaaaagattttcta
tctCGGAGACTCCTCTTACCAAAGGTGGATTTAGGGAAGTGTCTGAAGCC
ATCGATGTGgacacaaaaaagaaatttgttgtGAAAACCTTCCTTCCAGA
AGTTTTCAAAGTAATGGAAGAAGTGAATACTGTTATTCCACTTAATAAAG
AAAGTGAGGAGTCTCTATCAAAAAAGGCCATACAAGCCCATGCCCTAGCT
AAAAATGTCACcgattcattgaaaaaattatgCTTCAATAATAACTTAAT
GGACGATTTTGGGGAGTTTTTTACATATAATAAAGCGTACTTAGGATCAA
AGGTGATGCACGgtggagagaaaaaaattgtcatggTGGAAGAGTACGTT
GATGGAGAATTTattaaatttatcaacaatGATGGCAAAATCATTCATGG
TCAGCCAAAAGATCTGGACCGTTTACTGAAAGCCCAATGTCTTGCCCACT
ACTCACTCGTGAAATCTGGGCAAAGGTTTATGATTGTTGACATCCAAGGT
TCAGGTTATACACTTTACGATCCTGAAATTGCTACGACTGGTGATGCTAT
AGAAAATGAGCGTTTAAACTTTAATCTTGGCAATTTGTCCAAAGCTGCAA
TTGATTTGTTTATCATTGCTCATGTTTGCAATAGATTCTGTAAACTTGTT
GGGCTGGAGCAACCTCCTTCCTCAAAGATCGACTTGTCAAAATAA Coding sequence (CDS) from alignment at sc0000261_pilon:78261..83405+ >XLOC_040857 ID=XLOC_040857|Name=XLOC_040857|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2862bp|location=Sequence derived from alignment at sc0000261_pilon:78261..83405+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGAGATATTTTCGAGGTGTGTgcgtgaaaaagGAGAGATATTTTCGAGG
TGTGTgcgtgaaaaagaTGGCTACTAACAATGACAGAAAACTTTGGGAAG
AACgtgcacaaaaactgaaaaggaAGAGAATGGGTCAGGACACAGTGAAG
GGTGATAAAGCTGGTGCTGTTGGTTCTCATATTTTAGCCGAGAGAGAAAG
GACTGTTCAACGTCTTTCTAGTGTTGCTACTGGGAAAGCAatgaaattca
ataaaatggggCCTCAGGAATTCGTGGCCTATCCATTTGATGAATTGACA
ATCGAAAATTTGATTCAAGCGTGCAGTGCACATTTTCGAGATGAATTGCT
TGACAATCAAAGGTGTGATATTTTGCAATCACAAGATGGTCCTTCTTGTT
CTAAACTTTCACACATTAAAAGTTATAAGGTGATTTATGTTCGTTTTATT
ACAAATGTGAATCAAGCATCCATTTCCATAAGAAAGTATTTCGATAAGAT
GAAGATGCCACCTCGCAGCCCTTTATCCTCAATGAACGTTTTAAACTCTT
CTGCAGTATCAACACCAAGCAAATCCATTAAGCTTCAAATACCTCAAAAG
CAAAAGCCTGTCCAAACTACTCAATATCCAAAAAGCTTGTCCATCTCAAA
CATGCTTCAATTTGGAACAGCAataacaaaaatgcaaaatccaCCCGTGG
AAATTGAGCTCCAAGAAATTGACGTTTCAGCTATGAAATGGAGCTATCCa
acatcaaaaagattttctatctCGGAGACTCCTCTTACCAAAGGTGGATT
TAGGGAAGTGTCTGAAGCCATCGATGTGgacacaaaaaagaaatttgttg
tGAAAACCTTCCTTCCAGAAGTTTTCAAAGTAATGGAAGAAGTGAATACT
GTTATTCCACTTAATAAAGAAAGTGAGGAGTCTCTATCAAAAAAGGCCAT
ACAAGCCCATGCCCTAGCTAAAAATGTCACcgattcattgaaaaaattat
gCTTCAATAATAACTTAATGGACGATTTTGGGGAGTTTTTTACATATAAT
AAAGCGTACTTAGGATCAAAGGTGATGCACGgtggagagaaaaaaattgt
catggTGGAAGAGTACGTTGATGGAGAATTTattaaatttatcaacaatG
ATGGCAAAATCATTCATGGTCAGCCAAAAGATCTGGACCGTTTACTGAAA
GCCCAATGTCTTGCCCACTACTCACTCGTGAAATCTGGGCAAAGGTTTAT
GATTGTTGACATCCAAGGTTCAGGTTATACACTTTACGATCCTGAAATTG
CTACGACTGGTGATGCTATAGAAAATGAGCGTTTAAACTTTAATCTTGGC
AATTTGTCCAAAGCTGCAATTGATTTGTTTATCATTGCTCATGTTTGCAA
TAGATTCTGTAAACTTGTTGGGCTGGAGCAACCTCCTTCCTCAAAGATCG
ACTTGTCAAAATAAaTGGCTACTAACAATGACAGAAAACTTTGGGAAGAA
CgtgcacaaaaactgaaaaggaAGAGAATGGGTCAGGACACAGTGAAGGG
TGATAAAGCTGGTGCTGTTGGTTCTCATATTTTAGCCGAGAGAGAAAGGA
CTGTTCAACGTCTTTCTAGTGTTGCTACTGGGAAAGCAatgaaattcaat
aaaatggggCCTCAGGAATTCGTGGCCTATCCATTTGATGAATTGACAAT
CGAAAATTTGATTCAAGCGTGCAGTGCACATTTTCGAGATGAATTGCTTG
ACAATCAAAGGTGTGATATTTTGCAATCACAAGATGGTCCTTCTTGTTCT
AAACTTTCACACATTAAAAGTTATAAGGTGATTTATGTTCGTTTTATTAC
AAATGTGAATCAAGCATCCATTTCCATAAGAAAGTATTTCGATAAGATGA
AGATGCCACCTCGCAGCCCTTTATCCTCAATGAACGTTTTAAACTCTTCT
GCAGTATCAACACCAAGCAAATCCATTAAGCTTCAAATACCTCAAAAGCA
AAAGCCTGTCCAAACTACTCAATATCCAAAAAGCTTGTCCATCTCAAACA
TGCTTCAATTTGGAACAGCAataacaaaaatgcaaaatccaCCCGTGGAA
ATTGAGCTCCAAGAAATTGACGTTTCAGCTATGAAATGGAGCTATCCaac
atcaaaaagattttctatctCGGAGACTCCTCTTACCAAAGGTGGATTTA
GGGAAGTGTCTGAAGCCATCGATGTGgacacaaaaaagaaatttgttgtG
AAAACCTTCCTTCCAGAAGTTTTCAAAGTAATGGAAGAAGTGAATACTGT
TATTCCACTTAATAAAGAAAGTGAGGAGTCTCTATCAAAAAAGGCCATAC
AAGCCCATGCCCTAGCTAAAAATGTCACcgattcattgaaaaaattatgC
TTCAATAATAACTTAATGGACGATTTTGGGGAGTTTTTTACATATAATAA
AGCGTACTTAGGATCAAAGGTGATGCACGgtggagagaaaaaaattgtca
tggTGGAAGAGTACGTTGATGGAGAATTTattaaatttatcaacaatGAT
GGCAAAATCATTCATGGTCAGCCAAAAGATCTGGACCGTTTACTGAAAGC
CCAATGTCTTGCCCACTACTCACTCGTGAAATCTGGGCAAAGGTTTATGA
TTGTTGACATCCAAGGTTCAGGTTATACACTTTACGATCCTGAAATTGCT
ACGACTGGTGATGCTATAGAAAATGAGCGTTTAAACTTTAATCTTGGCAA
TTTGTCCAAAGCTGCAATTGATTTGTTTATCATTGCTCATGTTTGCAATA
GATTCTGTAAACTTGTTGGGCTGGAGCAACCTCCTTCCTCAAAGATCGAC
TTGTCAAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000261_pilon | genome | sc0000261_pilon:78261..83405 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 34-1431:3748 |
| Aaloc | 1-33:1 |
|
