XLOC_040840 (mRNA) -

Overview
NameXLOC_040840
Unique NameXLOC_040840
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000446_pilon:152490..153029+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040840 ID=XLOC_040840|Name=XLOC_040840|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=540bp|location=Sequence derived from alignment at sc0000446_pilon:152490..153029+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAAGGGTTCACGCTGTACGTTCTGCAGCAACAGATCCTAGTAAGCGTGG TAAGTTTGTGACCTATGGTTGTAATCAAACtgctgaaattctttttgctg cAGCAACATACCACATGTTAGCCATGTTTTCCCACTTCAAGGATTTAACT CCTTCAGTTTTGTCTCCTTTTAAATCTGGGACTAAAACTACTGAACGTCT GATAAGTGATTTACAAGGGAAAACAAATGCACTCCAATCTCTGGATGCCC AGCCTGTTTTATCAGATCTTGTAAACAAGTTATCCAAAGTTCAAAGCAAC CACACAACTGAAGATAGGTTGAAAGGTGCAGGTGCGACGAAACAAAATAC CACAAGTAGAAGGAGACTTCAGGATAAGTTAGCTCAAGTTACCATGAGCC CTTACAAATATCCAGCAACGTATGATGAATTCTGTAAGTCTCTTATTGCA GCttatgaaaaaggaaaaagtgaAGGAATTGAACTGTACAGAAAGTTTTG TCCTGAAGGTATTGCTTTTATTGAATCTAATGCTAAGTCT

Coding sequence (CDS) from alignment at sc0000446_pilon:152490..153029+

>XLOC_040840 ID=XLOC_040840|Name=XLOC_040840|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1080bp|location=Sequence derived from alignment at sc0000446_pilon:152490..153029+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAAGGGTTCACGCTGTACGTTCTGCAGCAACAGATCCTAGTAAGCGTGG
TAAGTTTGTGACCTATGGTTGTAATCAAACtgctgaaattctttttgctg
cAGCAACATACCACATGTTAGCCATGTTTTCCCACTTCAAGGATTTAACT
CCTTCAGTTTTGTCTCCTTTTAAATCTGGGACTAAAACTACTGAACGTCT
GATAAGTGATTTACAAGGGAAAACAAATGCACTCCAATCTCTGGATGCCC
AGCCTGTTTTATCAGATCTTGTAAACAAGTTATCCAAAGTTCAAAGCAAC
CACACAACTGAAGATAGGTTGAAAGGTGCAGGTGCGACGAAACAAAATAC
CACAAGTAGAAGGAGACTTCAGGATAAGTTAGCTCAAGTTACCATGAGCC
CTTACAAATATCCAGCAACGTATGATGAATTCTGTAAGTCTCTTATTGCA
GCttatgaaaaaggaaaaagtgaAGGAATTGAACTGTACAGAAAGTTTTG
TCCTGAAGGTATTGCTTTTATTGAATCTAATGCTAAGTCTAAAAGGGTTC
ACGCTGTACGTTCTGCAGCAACAGATCCTAGTAAGCGTGGTAAGTTTGTG
ACCTATGGTTGTAATCAAACtgctgaaattctttttgctgcAGCAACATA
CCACATGTTAGCCATGTTTTCCCACTTCAAGGATTTAACTCCTTCAGTTT
TGTCTCCTTTTAAATCTGGGACTAAAACTACTGAACGTCTGATAAGTGAT
TTACAAGGGAAAACAAATGCACTCCAATCTCTGGATGCCCAGCCTGTTTT
ATCAGATCTTGTAAACAAGTTATCCAAAGTTCAAAGCAACCACACAACTG
AAGATAGGTTGAAAGGTGCAGGTGCGACGAAACAAAATACCACAAGTAGA
AGGAGACTTCAGGATAAGTTAGCTCAAGTTACCATGAGCCCTTACAAATA
TCCAGCAACGTATGATGAATTCTGTAAGTCTCTTATTGCAGCttatgaaa
aaggaaaaagtgaAGGAATTGAACTGTACAGAAAGTTTTGTCCTGAAGGT
ATTGCTTTTATTGAATCTAATGCTAAGTCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040840XLOC_040840-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000446_pilongenomesc0000446_pilon:152490..153029 +
Properties
Property NameValue
Aaloc1-540:1