XLOC_040830 (mRNA) -

Overview
NameXLOC_040830
Unique NameXLOC_040830
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000046_pilon:1685924..1687240+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040830 ID=XLOC_040830|Name=XLOC_040830|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1317bp|location=Sequence derived from alignment at sc0000046_pilon:1685924..1687240+ (Clytia hemisphaerica_ch_hm2_pilon)
ttagattctttcCGGGAAAAATCACACCAAGCAAAACAACACCATGCAAA CAAAAGTGAAATCAACGCTAATATAAGCCTAAGGAAGATTCCAAGGAGTG GCGTTTCAAAGTTTGTGGAAAATCTCCATTGGtcaacaaaaaatgtaaat ctCCTAATCGAAATCGCAGAATCTGAGCCCAATTCATGGATCATCGATTC AAAAGACGCAAAAACAATTATACCAGGTAAAACAGAACCTAAGGATGCTG TTATAAGATCTCATATGTTTTAGCCGAAACAGTAGCATAATGAGTGGGGG CACTTATAGGAGGCAAATGTGTATCCGAAAAGGTCATATTTTTGGGTTAC CTTATTGGAATATATTTTCGAGTTTTCCAGTTTAGATTCGCCACATTCAA TACACGCaaagttgttttcaaaatatgccggaaatcacacatttttctca gaaatcaAAGATAATGAAATCTTTGAGggttaaaagtgacatttcttTAT TGCAGTACTCCACTAGCGTTTCTTTCCCGTGCTGTGCGAAAAAATCGCAA ACCAtaaagtactctcgggtacctaataagcgtcccccgctaattaattt ttcgaaaatcttccacccaggtcatttttattccaccccccgtttattaa ttaaattttgggaaaatattttgaaagctcCTCTTTTAAACCCTTATTct tctgtattagcctccttttcaaaacttttccacccaggacatttttattc caaccaccACTAGTGTTTTAGATTTTTCCACCCAACGCTTACTTATTTCA GAACCCTCCagattttgtttcttttctatAACAAAAATTTAGGGGAGGCT TCTGGATGATGCTCGGGATTATGGtgtatttattgatttttcccAACCCT GCCCCAATTTAGACGTCTACAAACATATGAAACAGATCAAATTAGAGAAG TGATCTGTGTGGCAATCTCAAACAGGGTATATGAATTCACAGATACCACA TCgacaaaatttcatattttgtttgatTGAATAGATTTTCAAGGACCTCA CCCATATATAGTCTTTTCGTCTTTGTATTTGTAGTTTTGTTCATACCTTA CAGGTAATACCAGACTAGAACTCGCACATTTTGAGCTAATGTTTAAACAA TTACTGAATCCTGAATCCGTTGATTTATTTCTATACACATATATATTTTT GTGAAGTATTCTAgattaaaagttattttctttCTAATAGGTGATATCCA ACCAGTACAGAATCCTGGTAAATCGTGGAAAAAGAGGCTTGTTTACGAGG ATCACACGTTCAATCAA

Coding sequence (CDS) from alignment at sc0000046_pilon:1685924..1687240+

>XLOC_040830 ID=XLOC_040830|Name=XLOC_040830|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=606bp|location=Sequence derived from alignment at sc0000046_pilon:1685924..1687240+ (Clytia hemisphaerica_ch_hm2_pilon)
ttagattctttcCGGGAAAAATCACACCAAGCAAAACAACACCATGCAAA
CAAAAGTGAAATCAACGCTAATATAAGCCTAAGGAAGATTCCAAGGAGTG
GCGTTTCAAAGTTTGTGGAAAATCTCCATTGGtcaacaaaaaatgtaaat
ctCCTAATCGAAATCGCAGAATCTGAGCCCAATTCATGGATCATCGATTC
AAAAGACGCAAAAACAATTATACCAGttagattctttcCGGGAAAAATCA
CACCAAGCAAAACAACACCATGCAAACAAAAGTGAAATCAACGCTAATAT
AAGCCTAAGGAAGATTCCAAGGAGTGGCGTTTCAAAGTTTGTGGAAAATC
TCCATTGGtcaacaaaaaatgtaaatctCCTAATCGAAATCGCAGAATCT
GAGCCCAATTCATGGATCATCGATTCAAAAGACGCAAAAACAATTATACC
AGGTGATATCCAACCAGTACAGAATCCTGGTAAATCGTGGAAAAAGAGGC
TTGTTTACGAGGATCACACGTTCAATCAAGTGATATCCAACCAGTACAGA
ATCCTGGTAAATCGTGGAAAAAGAGGCTTGTTTACGAGGATCACACGTTC
AATCAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040830XLOC_040830-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000046_pilongenomesc0000046_pilon:1685924..1687240 +
Properties
Property NameValue
Aaloc229-303:1243
Aaloc1-225:1