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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000071_pilon:486284..489141+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040819 ID=XLOC_040819|Name=XLOC_040819|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2858bp|location=Sequence derived from alignment at sc0000071_pilon:486284..489141+ (Clytia hemisphaerica_ch_hm2_pilon)
attcattttattttattttcagaacaAAACCATGAGCTTGTTTTCAAAGC
AGCAGATGATCCCAGTCTTATGTTGACAAAGTATGGAGAACATTTGTACG
ATCATTTAGTCATTTTTGCTCCATCTGTTGAAGGTATGAATTTACTAAAT
TATATCAAtattaatgaaaataattagTGGGTAACTATTACCTTAAGCAG
GCTGAATCATTTGAGGCATGCGATGGCGCTTGCTCACACCTCCACACACG
CCTAAAATTTCTGAGGAGACTACTATTAAAAGTGGTGAATAGCATGCCAT
ATCACACGCTAATTTAGCAAAACTAAGATTTTAGGAGCGTGATTGACCAC
ACTCCTGGAGTTTTCAAATTACAAAGCTTGCATAAGTTGTTAGAGAGATA
GGAATATAGGAGGTTGGAATCGCTGATAGACTGCCTCTCTGATTGtgaca
ataatttttttcaaatatctaaaGTCACTTTGACAACCAATTATTTGATT
AGTACCACTCTCTTGTTTAGAATTTGGTGGATCAATCAGCGTTAAGTCAA
TCACAGCATTCATTGATAATGGCGGCAACGTTCTTGTCACTGGTAGCTCA
TCTGTTGGTGAGTAACATAacaaaaatttagaggtttttttttttgcttt
caaagatCACAATATGCTTTCGACTTGAGTTATTCAGTAATGtaagtttt
ttgatgatttaatTTTCCATCTATGATTTCAATTATCTCACCTGATTTGC
TGGCTAGATTACAATCCTTTAatatcttattatttttttgccaGGTGGTC
CAATCAGGGAGCTTGGAAGTGATTGTGGAATTGAGTTTGATGAAGAGAAA
ACCTCCGTTATTGATCACCATAATTTTGATTCTTCTGATGAAGGAAGTgt
gagtttttttattttatcatgtGTTGGACAATCTTCTGCTTGCCGTTACG
TCATCCTTGGTCAAAGGTTTTTAGAGATGGGTCAGGCTAATGGTAAACCA
AGATAAAGTCCAAGCATCAGAAGTGTGAATACAATAGagaaatcaaattt
taagtAATATGATAATTAGCAATCATATTATATCATTTTATGATTGCTAC
ATGGAATTGATATTTCATGAACCATGTATCAACAAGGACATGCTTCAACC
ATCGCCTCAAAAGGTTCTCATATAATTGGATAGTGGGTGGCATTTTGAGA
CCTGGATTAAAGAGTGCGTGATTTTTTGCATCAGCAGTGGTTACTTTGGT
TTATTCTTATTAATGTTTATTCTCTCCTTTGTTTTCACATACAGCACACC
ACCATCTTGACAGACGGTAAGAACATCATCAAATCTGATGTCATCATCCC
ATCAAAGATCGAAGCACCAATCATGTTCAAAGGAGTTGGAATGACCGCAG
ACAATGATAATCCTCTAGTGTTGGAAATCCTCACTGCTTCATCCACTGCA
TATTCATATTATCCTGATGAAAAAATCTCCGAAGTAACTATTTTGATTTa
cttatttttgcaaattttgtctcGCTTTTTTCTGCAAGCATCGATAGCGT
CTTACAAGGCTCAGATTTGTTATTCTAATAATGTAGctgaaagaatttct
ttttcaaaagtataTGGAATTGAAATCTAAGAAGAATTCATTCTTCCTTA
CTTTTGGTATtaaattgttaaatttttctccTTCCAGTACCCATTAGCCG
TCGGCCGCAACACCCTTCTCATTGGTGGCCAACAATCACGAAACAATGCT
CGCGTTGTGTTCTGTGGTTCCCTTGATCTCTTCAGTGATCGATTCATGAT
GTCCACTGTTCAAAATGCTGCCCAAAGTACATCTGAAAGGTAAGAAAGAA
TGGTACAAATAAGATAAATCTTTGATTTGCCCTTAACGAAGAAATTTTTA
ATTGATCCAAACAGGTCTTTAGACCACGCAGATTGTTTAACAGAAAACCT
AACAATTTTTGAATGGTATGCTTGATTAAAATTGAGACTATTCTCTGTCC
GTCAAAATACAAATGCACTGTTAAGAGCTGTCTTTGTAATCTTTTTCCCT
CGTTTGTCTTATTCAGTTTCACAAGAAGTGGAAACATGGAATTAGCTTTC
GATATCGCTCAATGGACATTCAAACAAAACGGTGTTCTCAGAGTCATCAA
TGTCCAACATCACCTTGAAGGGGAGACAACACCACCAAATGCTTACACCA
TCGAAGAAGATGTTGTTTACTCCATCAAGATTGAGGAACTCAATAAGGGT
GTATGGAGACCATTCCAAAACAAGGATGTCCAATTAGAATTTTTCCGTAT
CGATCCTTTCGTAAGAACATACTTGACACCGACAGCATCTGGTGAATTCA
AAGTCCACTTCAAACTTCCCGATGTTTACGGtgtcttcaaattcaaagtg
gATTATGATCGTATCGGATACACTCACCTTTTCAGCTCAACTCAAGTAAg
attttgtttactttgaatTTAAATTCGTTTCTTTTGGTATAAAGAAGCTT
ATCTTTGACTAACTGACATctaaatttttaaacttcaaataCTGACCCTT
TTCCGTTGATTATTTCTTGAGTTGATGATTCCTTTACAATTTTAAGATTA
TTGAAAAGGAAATCAGATAAGTAGAAAATGTCATATTTCCTTAATCATTT
CCCTAACTATCCTTTAAATCTTCTTATTCATTcatctctttttctttgtt
agGTTTCAGTACGACCCAAACAACACACGCAATACGAGCGATTCATTTCG
TCCGCTTACCCTTACTACGCGTCCGCTTTCAGTATGATGATCGGTATCTG
TATTTTCAGTGTTGTTTTCTTGCACCACAAGGAGGataagaaaatcaaag
atgagtag Coding sequence (CDS) from alignment at sc0000071_pilon:486284..489141+ >XLOC_040819 ID=XLOC_040819|Name=XLOC_040819|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2400bp|location=Sequence derived from alignment at sc0000071_pilon:486284..489141+ (Clytia hemisphaerica_ch_hm2_pilon)
attcattttattttattttcagaacaAAACCATGAGCTTGTTTTCAAAGC
AGCAGATGATCCCAGTCTTATGTTGACAAAGTATGGAGAACATTTGTACG
ATCATTTAGTCATTTTTGCTCCATCTGTTGAAGattcattttattttatt
ttcagaacaAAACCATGAGCTTGTTTTCAAAGCAGCAGATGATCCCAGTC
TTATGTTGACAAAGTATGGAGAACATTTGTACGATCATTTAGTCATTTTT
GCTCCATCTGTTGAAGAATTTGGTGGATCAATCAGCGTTAAGTCAATCAC
AGCATTCATTGATAATGGCGGCAACGTTCTTGTCACTGGTAGCTCATCTG
TTGAATTTGGTGGATCAATCAGCGTTAAGTCAATCACAGCATTCATTGAT
AATGGCGGCAACGTTCTTGTCACTGGTAGCTCATCTGTTGGTGGTCCAAT
CAGGGAGCTTGGAAGTGATTGTGGAATTGAGTTTGATGAAGAGAAAACCT
CCGTTATTGATCACCATAATTTTGATTCTTCTGATGAAGGAAGTGTGGTC
CAATCAGGGAGCTTGGAAGTGATTGTGGAATTGAGTTTGATGAAGAGAAA
ACCTCCGTTATTGATCACCATAATTTTGATTCTTCTGATGAAGGAAGTCA
CACCACCATCTTGACAGACGGTAAGAACATCATCAAATCTGATGTCATCA
TCCCATCAAAGATCGAAGCACCAATCATGTTCAAAGGAGTTGGAATGACC
GCAGACAATGATAATCCTCTAGTGTTGGAAATCCTCACTGCTTCATCCAC
TGCATATTCATATTATCCTGATGAAAAAATCTCCGAACACACCACCATCT
TGACAGACGGTAAGAACATCATCAAATCTGATGTCATCATCCCATCAAAG
ATCGAAGCACCAATCATGTTCAAAGGAGTTGGAATGACCGCAGACAATGA
TAATCCTCTAGTGTTGGAAATCCTCACTGCTTCATCCACTGCATATTCAT
ATTATCCTGATGAAAAAATCTCCGAATACCCATTAGCCGTCGGCCGCAAC
ACCCTTCTCATTGGTGGCCAACAATCACGAAACAATGCTCGCGTTGTGTT
CTGTGGTTCCCTTGATCTCTTCAGTGATCGATTCATGATGTCCACTGTTC
AAAATGCTGCCCAAAGTACATCTGAAAGTACCCATTAGCCGTCGGCCGCA
ACACCCTTCTCATTGGTGGCCAACAATCACGAAACAATGCTCGCGTTGTG
TTCTGTGGTTCCCTTGATCTCTTCAGTGATCGATTCATGATGTCCACTGT
TCAAAATGCTGCCCAAAGTACATCTGAAAGTTTCACAAGAAGTGGAAACA
TGGAATTAGCTTTCGATATCGCTCAATGGACATTCAAACAAAACGGTGTT
CTCAGAGTCATCAATGTCCAACATCACCTTGAAGGGGAGACAACACCACC
AAATGCTTACACCATCGAAGAAGATGTTGTTTACTCCATCAAGATTGAGG
AACTCAATAAGGGTGTATGGAGACCATTCCAAAACAAGGATGTCCAATTA
GAATTTTTCCGTATCGATCCTTTCGTAAGAACATACTTGACACCGACAGC
ATCTGGTGAATTCAAAGTCCACTTCAAACTTCCCGATGTTTACGGtgtct
tcaaattcaaagtggATTATGATCGTATCGGATACACTCACCTTTTCAGC
TCAACTCAATTTCACAAGAAGTGGAAACATGGAATTAGCTTTCGATATCG
CTCAATGGACATTCAAACAAAACGGTGTTCTCAGAGTCATCAATGTCCAA
CATCACCTTGAAGGGGAGACAACACCACCAAATGCTTACACCATCGAAGA
AGATGTTGTTTACTCCATCAAGATTGAGGAACTCAATAAGGGTGTATGGA
GACCATTCCAAAACAAGGATGTCCAATTAGAATTTTTCCGTATCGATCCT
TTCGTAAGAACATACTTGACACCGACAGCATCTGGTGAATTCAAAGTCCA
CTTCAAACTTCCCGATGTTTACGGtgtcttcaaattcaaagtggATTATG
ATCGTATCGGATACACTCACCTTTTCAGCTCAACTCAAGTTTCAGTACGA
CCCAAACAACACACGCAATACGAGCGATTCATTTCGTCCGCTTACCCTTA
CTACGCGTCCGCTTTCAGTATGATGATCGGTATCTGTATTTTCAGTGTTG
TTTTCTTGCACCACAAGGAGGataagaaaatcaaagatgagtagGTTTCA
GTACGACCCAAACAACACACGCAATACGAGCGATTCATTTCGTCCGCTTA
CCCTTACTACGCGTCCGCTTTCAGTATGATGATCGGTATCTGTATTTTCA
GTGTTGTTTTCTTGCACCACAAGGAGGataagaaaatcaaagatgagtag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000071_pilon | genome | sc0000071_pilon:486284..489141 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1171-1326:2703 |
| Aaloc | 793-1170:2068 |
| Aaloc | 640-789:1688 |
| Aaloc | 451-639:1295 |
| Aaloc | 349-450:797 |
| Aaloc | 262-345:523 |
| Aaloc | 127-258:1 |
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