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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000301_pilon:193217..200001+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040780 ID=XLOC_040780|Name=XLOC_040780|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6785bp|location=Sequence derived from alignment at sc0000301_pilon:193217..200001+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATGGAACACAAAAGCACGTGCAACTTTCCTTGGTCTTGAAAAGACA
ATCGAAAAACATGCAGTCAACGGAGTGATATATCCCATATATTcacaaaa
agaaattgaagatcTCGACCTTCGTGAACAAGGTACACATtgctttttat
aagcaaccaggttgctatCGAGCTCTGAGATTAGCCTAAACTTTTTTACA
ACAGTATCTCGTAAAGTAGAAGCTTCttagataatctaaccatggTAAAT
GATAGtccttgacccaataagcataaatatggtataatatcagggttggt
caaagcaaatttccTGACCCGAGAATTGGagtttcttatgaaaaaatgta
TTTAATTTATAAAATGACAGAAAACAGAGGACCACAGCAGGAGAGATGGA
GCGAAGGGGTCCAATCTTAGGAGGGTAAATTGTTTTTGGTTAGACAAAAG
ATTGTGTTTTTGACATTCATTTGAGGGGCAGGAATAGCTTTAATACTAAT
AGAGACtcagcggttttcgtgatggggTGATTGACgttttttcaagttcg
tgattttgtgattgaatatttttcaagtgcgTGATTACGTGATAGGAGGA
ACTAAAATGgtcaacgtgatcgtgatagaaaggaaatttactcctgataa
cgtgatttggagTTTTTTATTGCATGATTTAAAAGGTgactggggggggg
gttcttaATACCATTTGCTTTCCATTCTATTTGAGAAGATTTTATGGTTA
ATATGTTTTTACGATTGTAAAGATTGCCTTGAAAACCTTTATCAATCAAA
AGCTCCTGAAATGCACGAGAGACACGCCATcatccttctagatccggaga
tatcagcctttaaagtttgaactagcgactttctttaaaaaacttagaaa
aaaatggccgTGGCACATTTTTTAAAGGGTTAATCTATACTCATAATGTA
ATCCTTTGCACTTTCTTTTAGGTTACTCGCGACTCGCCATTCCTCACGAG
GACGTCAAAGTTTTGAACGAAGGCTTAAACGAAACCATGCAAGATATGAA
ATTAGATTCATCTATGCTTTTGTTCACTTATGTTCCAAACTGTGATGGAA
ATGCGCCTGAAGCTTGGTTCCCAATTCTACAAAGTTACGTCGATTTATGT
GCTAATGGATTTTTACGTTTCCGCAAAGAAGAGCAACCACGCGATGCCAG
CGACCCCGTTAGAAGATTCTTGGACACCACTCATAAATGGTCAAAATACA
TGTTAAACGATCGTGTTTTAGCACGTCGACCCTGGGTGAGCgagaaaaat
caatttgtgattgATGATTACTTAGATGACGAGGATGACGTCAACGATAT
CCCGGCCGCTTTGTATCCGACCGATTTTTCTGTCCGCTTCTTTAGAGAAA
TTCAAGAAGGACTTATGACGTGTGGTACTGACCGCAAAAGATATGTCTCC
GATAATTCGACATGCcgttaatttttaaacatttaaaccATAAAGTTCAG
AAATACAGACTATCACTGCTTTTACAATAGCAATCATTGATAATTAACTA
AGGAGAGTTATGGGTGCAATTCAAACAGTAATTTCAAAATTAGAGACAct
ttaaaaatagaattttcgCTTCCCTGATTATTTCCCAAAGAGGACACTTC
TTAAACTTTCTTTGTCCAATAGAAGCCTGCATCATTGAAAATACCACATA
TACCGTGGGCCGATATATTCTATCTCTATCTTCCTAAATCGAATACATAT
ATGCATATGATCTTGTTTTAAAGACACCATTCGAAGTTTCAACTACCATT
TTCTTACAcatcattgggccattccattttatatccattagGCTGGACGA
ATATTTCGAATATTTTTCCAGGGAGTTCTTTTTTATCTATAATTGCTATT
CATAGTGGGTGAAATGATATCTGCACAATTTCAAGCTCTCGTACGGTTTG
AAAAAGTTTATCCATAAATTGAATAGcccattaaaaaaaaagaaaaactt
ttgccTTTTACCGCACCGGGTGAagacaaatttttggaaattcttttgtt
aaggggccatccacatagtacgtacgcacaaAAGGGGAATGGGGTCTTCC
CAAAGCGTAAGCTTGCGTGCAAGGGGAGGGGAGGgattttttcatagccc
ttttttaaataaacattgagtttcatgtatgaaataaacgtccgaaccaa
acgatttgaattcaaaatttgctTCAACCGAGGGgagggggggtctgaat
aaaaaagtacgtacttactaGGGGGTCTAGCCATTTGCGTAAGGTTACGT
ACATTAAGGGGGAGGGGATACtcaattttcgacattttagtgcgtacgta
ctatgtgaaCGACCCTAAGGggtctgaccatagtgaatttttcatatttg
ccatGCACAAAATAAAGATTTCTGCCTGATGGAGCCAACTAAACTATGGC
ATgctatacattttctgttaggcaaCTACTCCTGcatcttaaaatcttaa
atatgcaatgaaagaatttgatgaaggggaaaatgaagacttttgcgagg
aatagtatttcaactttaaagacctaattttcggcaaagaaaaaacattt
tgaaaattttttttgcgttagatggtgtatctttaaccaaaccaaaaata
tattttcggaaaactttttataaagcttctttgtctcaaaaacTTGGAAA
TAGTgctttttagccaatttttcatcacaaaaacagttattataattttt
gatacatcaatcttaaaaatctttccgaaaaatatcaaatagtTCTTGAA
CCTTagtatattttgtaaaaaagggTAATATAACACTTTAAAATTACTCT
TGACAGAATAAGTTACCAAAGACTTGTGTCAAAGTGTCAAGGaaccaaaa
acaaaagttttctaTTCAAATCCCTTAacaaattttctgactatggtcag
ggCCATTGAGTTCCAAGCAAGGGCTAGAGGCAAAACCTTCTCaagcaaga
gaaattgaagccacttatttcccatccaaaacgcgcatagagcacgccgt
aatcatgacgacggattgtatcaaGCGGTTTCTTAGTTTtagaggactac
attttttgaaatctagattttagtttcaatccagGGTTTGTGTAAAAACA
ACGCGCGGGCGTTCTTGATGGGAAAgaggtttcatttcccatccaggagt
ctcgcttctagcccttccggcttgaaactcaatggtcaggGCCCTTAATT
CAGCCGTGTTAGCGTAAGAGGCACGTCTCCTCTCCAtgtcttgaaaaaaa
ttatcaaaatttgagacgaGTTCTATGAAATAACCCTTACTAtagtagaa
aaaaatcaatgtaGCAAAAGGATTATTTCATAAAACTtgtctcaaatttt
gataatttttttcaattattaaaCTATTCATACTAAATACTGACAGATCa
tgtaaaaacctttctttttaagatTGTAATGGATTCCTCCAAAAAAGCTG
CAAGGATAAGACACATACAGTTACTTTGCGAATCTAAGAATTTATATTAT
CAGGAAGACGTTTTTTGCAAATAGGagacaaaatgactaaaagtgtcaaa
aattaccaaaagtcgACCATGTCAGAttaatcttgaaaattagtaaattt
aagaccctgtcagatatcttcagagcctaaaagaGGGACCCttaccagcg
gcacgtccctgtacccaattttgcctgagtgccccccccccccccccccc
cgaacgGGGACACTACgcaatccaaatatggttaagaGATGAGACACCCG
GGGGAGGGCTAGAGTCATACTTTGAAGAGATTCCttttttttatccaaag
gacttttagtgcattcagctacagcttaaccggcgtgcgacgccagGTAC
TGGCTAGCTTATATTATTAGGAAGACGtttttttGCAAATAGGAGACAAA
GTTTGGGGTATTTTCGAGGAAGAAGCTTTCACAAATCCAGCTTTTCGAAG
CTGGAAAAAATTCGCAATTCGttgattttcttgttttcttccTAGATTTT
CAGATCATTCATTTTTCTAGAAACAGATTGATGATAAAACCTGACATATT
TTACATCTAAAAatatgttggacggtgaaaagTATGCGgatattattatt
ttaatatttttttcacattaatcaataaaataatcaataaaaaataattt
ttatgttattttgaaagattttcatggcaaagatttaaaagaaaagggtg
atttttttgagaaaaaaaaatttctcgaaTTTCCTTGAAATTCACTAAAA
TGCAAgaagtgcaaaaaaaatcaaaaagatataGCACCTGTCCACATTAT
GATTGGAATGTAAAAAATCTGAATGAATCTTGTTGAATCGTATAAGACAT
AAAAACAACTACATATTTGCCATTTCTGGTCTGGTTTGATTGAGCAATCG
CACCTGCTCGCACGACAATTCGTCTGAATTCATCTCTCATAtcttaaatt
ttagattttcattcGAAATCGAAACACCTTTAAAAATCTTATTAAAGTGC
ATGAATTGTCTCAAGTTTAAATAACAACGTTAGCTGTCTAAACAGCAACG
GTCTATAACACTAAGACGCCTATCTATATTTAATCATGGTTGGTAAAAAT
AGCtgtgtatatatatatattttgcatatatatCACGATCGCAATCGAGA
AAGCTATCATTTGAAGGCAGGATTTGTCAAGTAAGgaccaaaaagttttc
agtCATCTTCTTTTAAGGTAAGAAACTTTTCgacttaaattttttgtttt
ttttgatatcatttgcttaccttaagggaagaaattttcgcgagaagaaa
ttttcgcggaatttaatttcgcgaatcagagtttcaaaatggcaaatttc
gcggaatttaatttcgcgaatgattcgattttaaaagtttcacggaattt
aatttcgcgattgagaagaatttatcaacttagattaacttttaagcatc
acggagttgtttatatttgtttatatttgataaaaaatacacgttataat
gcttaaaaatcaattgtgtccatctttttttggtaatacctagtcaaaaa
caacaaaataaaagaagaagaaaaaaaaaatcgaatttcgcggaatttaa
tttcgcgatttaacaattttggtgtgtttcgcggaatttaatttctcgAA
TTatgcccaaattcgcgaaattaaattccgcgaaaatttcttccgcgaaa
atttcttctcgcgaaaatttcttcccttaaggtactcatcaattttaatt
cacaagctttttcacattggattgacatggatgtggagcaagattggtca
gaaaaaggaaaagagaaacattttttgcttaggTCAGCACGATATAACAa
tacactgtcctgatatgaaatatgtgtctgatatgaaacaggagcaagta
tttttttaatgattttatattttcgaaATGGAATTAAATTTAATAGTAAG
GTGATTCTTCAAGGGTCTCTTGAAGATGGTTTCATAGTACTCGTTTGATT
TTGCTCTAAATAATGATATTAATATTCCCCTCTTCTTCTTTACTTTTCAA
TTAGGAACGATAATGTCTCAGCAAAAACAATCCGTTCCTGGTAAACCTAA
AATCCCGATCGCCTGGTGTTTTGGGTACGGCTCGCTGGTAGAATCCTACC
ATAACAAAGCGAAATATGTTGAAGTGAATATCAATTATCGAAGAGTGTGG
AATGCATGGAACACAAAAGCACGTGCAACTTTCCTTGGTCTTGAAAAATG
TGCCGAAAAGACAGCCATTAATGGAGTGATCTATCCCATTTATTCACAAG
AGGAGATTGAAGCATTGGATTTACGAGAGCAAGGTGAGAATCAATAATCT
TAAGTTGGATTTTAAGGGTTTAAAAATGCGTTGGTTGATCGGGAAAGTAT
ctgagaccatgttcagacgttacagttccgtttcgctccggtgtGAATTT
CTACGAATCAAGAGTGTTCATATTAgcttcggaacgtttcggagcaagaa
atgGAGCAGTTGTTCCGATAAAAATAGTGGTTTTGCagtgtaacgtcttc
ttttttgacgttcacacttgtttcggaacccgTTACGTCTGAGCATGGTC
TGAGGATAATGAGAACTTTACAAATCTACCAACGAAAAGATTTTACTCGA
GTGAATTTACAAAGCTTCAAAACTGTAATGAAAACAAGAGCCAATCATCA
GAACTTTATAATAACACGACCGTAACTAtttttttCAGGTTACTCACGAC
TCGCCATTCCTCACGAGGACGTCAAAGTTTTGAACGAAGGCTTAAACGAA
ACCATGCAAAACATGACATTGAGTCCTACAATGGAGCTGTTCACTTATGT
TCCTAACAGTGCTGGTAACGCACCAGAAGCTTGGTTCCCCATCTTGCAAA
CCTACATTGATTTATGCGCTAACGGATTTTTACGCTTCCGCAAGGAGGGT
CAAGAGCGTAACTCTGACGATCCTGTCCGGCGATTCTTAGACACGACGTT
CGGATGGTCCCGTTATATGCTTAACGACCGACCCGTGGCACGTCGACCCT
GGGTGAGCgagaaaaatcaatttgtgattgATGATTACTTAGATGATGAG
GATGATGTACACGATATCCCGGCCGCTTTGTATCCGACTGATTTCGCAGT
CAGATATTTCAGAGAGATTCAAGAAGGATTGATGACTTGTGGTACAGACC
GACAGAAATACGTCAAAGATTCAACTATGATGTGA Coding sequence (CDS) from alignment at sc0000301_pilon:193217..200001+ >XLOC_040780 ID=XLOC_040780|Name=XLOC_040780|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1386bp|location=Sequence derived from alignment at sc0000301_pilon:193217..200001+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATGGAACACAAAAGCACGTGCAACTTTCCTTGGTCTTGAAAAGACA
ATCATGCATGGAACACAAAAGCACGTGCAACTTTCCTTGGTCTTGAAAAG
ACAATCAAGAGTGTGGAATGCATGGAACACAAAAGCACGTGCAACTTTCC
TTGGTCTTGAAAAATGTGCCGAAAAGACAGCCATTAATGGAGTGATCTAT
CCCATTTATTCACAAGAGGAGATTGAAGCATTGGATTTACGAGAGCAAGA
AGAGTGTGGAATGCATGGAACACAAAAGCACGTGCAACTTTCCTTGGTCT
TGAAAAATGTGCCGAAAAGACAGCCATTAATGGAGTGATCTATCCCATTT
ATTCACAAGAGGAGATTGAAGCATTGGATTTACGAGAGCAAGGTTACTCA
CGACTCGCCATTCCTCACGAGGACGTCAAAGTTTTGAACGAAGGCTTAAA
CGAAACCATGCAAAACATGACATTGAGTCCTACAATGGAGCTGTTCACTT
ATGTTCCTAACAGTGCTGGTAACGCACCAGAAGCTTGGTTCCCCATCTTG
CAAACCTACATTGATTTATGCGCTAACGGATTTTTACGCTTCCGCAAGGA
GGGTCAAGAGCGTAACTCTGACGATCCTGTCCGGCGATTCTTAGACACGA
CGTTCGGATGGTCCCGTTATATGCTTAACGACCGACCCGTGGCACGTCGA
CCCTGGGTGAGCgagaaaaatcaatttgtgattgATGATTACTTAGATGA
TGAGGATGATGTACACGATATCCCGGCCGCTTTGTATCCGACTGATTTCG
CAGTCAGATATTTCAGAGAGATTCAAGAAGGATTGATGACTTGTGGTACA
GACCGACAGAAATACGTCAAAGATTCAACTATGATGTGAGTTACTCACGA
CTCGCCATTCCTCACGAGGACGTCAAAGTTTTGAACGAAGGCTTAAACGA
AACCATGCAAAACATGACATTGAGTCCTACAATGGAGCTGTTCACTTATG
TTCCTAACAGTGCTGGTAACGCACCAGAAGCTTGGTTCCCCATCTTGCAA
ACCTACATTGATTTATGCGCTAACGGATTTTTACGCTTCCGCAAGGAGGG
TCAAGAGCGTAACTCTGACGATCCTGTCCGGCGATTCTTAGACACGACGT
TCGGATGGTCCCGTTATATGCTTAACGACCGACCCGTGGCACGTCGACCC
TGGGTGAGCgagaaaaatcaatttgtgattgATGATTACTTAGATGATGA
GGATGATGTACACGATATCCCGGCCGCTTTGTATCCGACTGATTTCGCAG
TCAGATATTTCAGAGAGATTCAAGAAGGATTGATGACTTGTGGTACAGAC
CGACAGAAATACGTCAAAGATTCAACTATGATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301_pilon | genome | sc0000301_pilon:193217..200001 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 199-693:6291 |
| Aaloc | 55-195:5742 |
| Aaloc | 1-51:1 |
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