|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000022_pilon:2125833..2127969- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040774 ID=XLOC_040774|Name=XLOC_040774|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2137bp|location=Sequence derived from alignment at sc0000022_pilon:2125833..2127969- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGTTTTACAGGGTGTTACTTCTGGTAGTGATACTAAACGTCATTGC
TCAAAACCATTGTCATCGAAAGAATCATTCAAGAAAGAGGCGTATCAAAA
ATGGTAGCGGAGTTGCGGAGAAAATTGATTTGGTTTTCATTATCGACGAA
AGTGAAGGAATGTCTAAAAATGATTTTGAAATTAGTGTCAAAGCAATGTA
CAAACTTTTGAAACATTTCAGTATTTCACCTGGTACGACCCGTGTTGGCT
TATATACTGTTGGTCGAAAATTCAAGAAGCATTTCGAGTTCCGAGATCAT
GTGAACCGGGAATGCGTCATGAAAAGCATTCGGAAACTTGTCTTAAAAAC
GAGCCCGAGGAACAAAAATTTCACAGAGAACCTACGTACAGGGTTCGATG
AGATCAAAGAGAAACATACAGATATTGAAGGGCAGCGTCTAATCTACCTG
TACATAACGAATAAGCCAGAAGATGTCAAGCTGATTAATAGTGAGGTTGA
ACTGGAAAATGGAAGTGAAATGACTGTCCTCTTGCTGGAAAAGGCAGTTC
TGCTGAATGAAAAACATCGACACCATAAAACGAAAGCGAAAGAAAGATCT
CACAGTAGCCATCATAAGAAAGAAACATCAAAGAGAACTCCGGTCAGTGA
AAAGCCATCTAAAAAGGTTACCATCGAAAGAGCGGGTAGCAAAATACAAG
TGGTCAACCTACCAGTGGAAACTGAACACATTCTATACAAGATTAACGTA
GAGAATAAACAATATGGTGTTTGTGAGCATAAAAAAGATGGTAGCCCAGT
CATGGACGAATGTGATCGTCATTGCACATGCGTGAACCAGAAATTGACCA
ATTGTTATCGATTACGTAAAGAATTCACGTCAATGACGTCAGAAGAGCGT
CGACGTTATTTGAAAGCGTATAAAACTCTAACGACGAAATCACCTTATAA
AGACACATACGAACGCTTCATATTCATGCACTATAAATACTTTTGTTGGG
GAATTCATAACAGAGAAATGTTTTTACCATGGCATCGATGGTACCTATCC
ATAATGGAGGATTTGTTGCGACAGATAGATTGTGGAATTACAATTCCATA
TTGGGATTGGTCTTATGCGAGTCATGATCCCTGGAATCGAACTAATCTGT
GGCGATCTTCGGATGATGGGTTAGGTAAGAGAGGTATTTGTGTGTGTGAG
CTCTTTACAGGCCTGAATCAAATAACATATGTAGAAAAAATAACAACCAT
GTTTAATTATGGTCTTTTTTAGTTAAGTCGAATAGTCAGTAACTAGTATC
AAACTTTCCAAGCATTCAAGAAAAAATAGCCAATCTGGTTTTAAATTAAT
TATTCTCCATCGTTTTCTCTTAGGTCCCAATGGCAATCGATACAAAGGTT
ATTGCGTACAAAAAGGTTTATTCCGTGAATCACAGTGGAAAACCCCTTAC
TGGGAAGACCCTATGGATATCGTTCTCTCATCCGCTGACCAGTTGGGCGG
AGATATTGAAGACCAAAGGGGACATTTAGCTTTCTGTTTACGAAGGGCAT
TCAAAGGTCATACGCCTAGTTATATCAGCGTACAGCGTACATTGTTGCTG
CCTGCTCGTCATTTCAAAGACTTCGATATTCAGATGCGACACAACTTCCA
CGACCGAGTCCACAACACCATAGGTGGTACCATGTGCACCCATTATGCCG
CAGATACGCCCGAATTTCATTTCCACCACTCCTTCTTGGATAAAATTTGG
TTTAAATGGCAATCCATCAGCTCTGATCATAAATGGGTTCATTTCTTACA
AAGGAATCACACCAAAATGTTAGGAACTGAATATAATCAATTTGAGTATA
CAAATTGTGATAATCTACCTCGTTGTATTAAAGTCACATATAAAGATTTT
CCTAATAGAAAACACACTAAAAGACACAGAGAAAGAAGATCACCCATAGA
TATAGATTCAATGGGACGAATGACGAAAGATTACTGGCAGAGTTATTTGA
ATGACAGCTGGTATTCAAGTTTTCCAAATTGTTCTCGATCGAAGATAGAG
AAAAAACGAGCCAAATTTTTACATTCGATTTTGGATGGTCCAGGCGAGGC
TTCCGCTGAAGATTTAAGACATAAGCTTTATGGTTGA Coding sequence (CDS) from alignment at sc0000022_pilon:2125833..2127969- >XLOC_040774 ID=XLOC_040774|Name=XLOC_040774|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3876bp|location=Sequence derived from alignment at sc0000022_pilon:2125833..2127969- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGTTTTACAGGGTGTTACTTCTGGTAGTGATACTAAACGTCATTGC
TCAAAACCATTGTCATCGAAAGAATCATTCAAGAAAGAGGCGTATCAAAA
ATGGTAGCGGAGTTGCGGAGAAAATTGATTTGGTTTTCATTATCGACGAA
AGTGAAGGAATGTCTAAAAATGATTTTGAAATTAGTGTCAAAGCAATGTA
CAAACTTTTGAAACATTTCAGTATTTCACCTGGTACGACCCGTGTTGGCT
TATATACTGTTGGTCGAAAATTCAAGAAGCATTTCGAGTTCCGAGATCAT
GTGAACCGGGAATGCGTCATGAAAAGCATTCGGAAACTTGTCTTAAAAAC
GAGCCCGAGGAACAAAAATTTCACAGAGAACCTACGTACAGGGTTCGATG
AGATCAAAGAGAAACATACAGATATTGAAGGGCAGCGTCTAATCTACCTG
TACATAACGAATAAGCCAGAAGATGTCAAGCTGATTAATAGTGAGGTTGA
ACTGGAAAATGGAAGTGAAATGACTGTCCTCTTGCTGGAAAAGGCAGTTC
TGCTGAATGAAAAACATCGACACCATAAAACGAAAGCGAAAGAAAGATCT
CACAGTAGCCATCATAAGAAAGAAACATCAAAGAGAACTCCGGTCAGTGA
AAAGCCATCTAAAAAGGTTACCATCGAAAGAGCGGGTAGCAAAATACAAG
TGGTCAACCTACCAGTGGAAACTGAACACATTCTATACAAGATTAACGTA
GAGAATAAACAATATGGTGTTTGTGAGCATAAAAAAGATGGTAGCCCAGT
CATGGACGAATGTGATCGTCATTGCACATGCGTGAACCAGAAATTGACCA
ATTGTTATCGATTACGTAAAGAATTCACGTCAATGACGTCAGAAGAGCGT
CGACGTTATTTGAAAGCGTATAAAACTCTAACGACGAAATCACCTTATAA
AGACACATACGAACGCTTCATATTCATGCACTATAAATACTTTTGTTGGG
GAATTCATAACAGAGAAATGTTTTTACCATGGCATCGATGGTACCTATCC
ATAATGGAGGATTTGTTGCGACAGATAGATTGTGGAATTACAATTCCATA
TTGGGATTGGTCTTATGCGAGTCATGATCCCTGGAATCGAACTAATCTGT
GGCGATCTTCGGATGATGGGTTAGATGCAGTTTTACAGGGTGTTACTTCT
GGTAGTGATACTAAACGTCATTGCTCAAAACCATTGTCATCGAAAGAATC
ATTCAAGAAAGAGGCGTATCAAAAATGGTAGCGGAGTTGCGGAGAAAATT
GATTTGGTTTTCATTATCGACGAAAGTGAAGGAATGTCTAAAAATGATTT
TGAAATTAGTGTCAAAGCAATGTACAAACTTTTGAAACATTTCAGTATTT
CACCTGGTACGACCCGTGTTGGCTTATATACTGTTGGTCGAAAATTCAAG
AAGCATTTCGAGTTCCGAGATCATGTGAACCGGGAATGCGTCATGAAAAG
CATTCGGAAACTTGTCTTAAAAACGAGCCCGAGGAACAAAAATTTCACAG
AGAACCTACGTACAGGGTTCGATGAGATCAAAGAGAAACATACAGATATT
GAAGGGCAGCGTCTAATCTACCTGTACATAACGAATAAGCCAGAAGATGT
CAAGCTGATTAATAGTGAGGTTGAACTGGAAAATGGAAGTGAAATGACTG
TCCTCTTGCTGGAAAAGGCAGTTCTGCTGAATGAAAAACATCGACACCAT
AAAACGAAAGCGAAAGAAAGATCTCACAGTAGCCATCATAAGAAAGAAAC
ATCAAAGAGAACTCCGGTCAGTGAAAAGCCATCTAAAAAGGTTACCATCG
AAAGAGCGGGTAGCAAAATACAAGTGGTCAACCTACCAGTGGAAACTGAA
CACATTCTATACAAGATTAACGTAGAGAATAAACAATATGGTGTTTGTGA
GCATAAAAAAGATGGTAGCCCAGTCATGGACGAATGTGATCGTCATTGCA
CATGCGTGAACCAGAAATTGACCAATTGTTATCGATTACGTAAAGAATTC
ACGTCAATGACGTCAGAAGAGCGTCGACGTTATTTGAAAGCGTATAAAAC
TCTAACGACGAAATCACCTTATAAAGACACATACGAACGCTTCATATTCA
TGCACTATAAATACTTTTGTTGGGGAATTCATAACAGAGAAATGTTTTTA
CCATGGCATCGATGGTACCTATCCATAATGGAGGATTTGTTGCGACAGAT
AGATTGTGGAATTACAATTCCATATTGGGATTGGTCTTATGCGAGTCATG
ATCCCTGGAATCGAACTAATCTGTGGCGATCTTCGGATGATGGGTTAGGT
CCCAATGGCAATCGATACAAAGGTTATTGCGTACAAAAAGGTTTATTCCG
TGAATCACAGTGGAAAACCCCTTACTGGGAAGACCCTATGGATATCGTTC
TCTCATCCGCTGACCAGTTGGGCGGAGATATTGAAGACCAAAGGGGACAT
TTAGCTTTCTGTTTACGAAGGGCATTCAAAGGTCATACGCCTAGTTATAT
CAGCGTACAGCGTACATTGTTGCTGCCTGCTCGTCATTTCAAAGACTTCG
ATATTCAGATGCGACACAACTTCCACGACCGAGTCCACAACACCATAGGT
GGTACCATGTGCACCCATTATGCCGCAGATACGCCCGAATTTCATTTCCA
CCACTCCTTCTTGGATAAAATTTGGTTTAAATGGCAATCCATCAGCTCTG
ATCATAAATGGGTTCATTTCTTACAAAGGAATCACACCAAAATGTTAGGA
ACTGAATATAATCAATTTGAGTATACAAATTGTGATAATCTACCTCGTTG
TATTAAAGTCACATATAAAGATTTTCCTAATAGAAAACACACTAAAAGAC
ACAGAGAAAGAAGATCACCCATAGATATAGATTCAATGGGACGAATGACG
AAAGATTACTGGCAGAGTTATTTGAATGACAGCTGGTATTCAAGTTTTCC
AAATTGTTCTCGATCGAAGATAGAGAAAAAACGAGCCAAATTTTTACATT
CGATTTTGGATGGTCCAGGCGAGGCTTCCGCTGAAGATTTAAGACATAAG
CTTTATGGTTGAGTCCCAATGGCAATCGATACAAAGGTTATTGCGTACAA
AAAGGTTTATTCCGTGAATCACAGTGGAAAACCCCTTACTGGGAAGACCC
TATGGATATCGTTCTCTCATCCGCTGACCAGTTGGGCGGAGATATTGAAG
ACCAAAGGGGACATTTAGCTTTCTGTTTACGAAGGGCATTCAAAGGTCAT
ACGCCTAGTTATATCAGCGTACAGCGTACATTGTTGCTGCCTGCTCGTCA
TTTCAAAGACTTCGATATTCAGATGCGACACAACTTCCACGACCGAGTCC
ACAACACCATAGGTGGTACCATGTGCACCCATTATGCCGCAGATACGCCC
GAATTTCATTTCCACCACTCCTTCTTGGATAAAATTTGGTTTAAATGGCA
ATCCATCAGCTCTGATCATAAATGGGTTCATTTCTTACAAAGGAATCACA
CCAAAATGTTAGGAACTGAATATAATCAATTTGAGTATACAAATTGTGAT
AATCTACCTCGTTGTATTAAAGTCACATATAAAGATTTTCCTAATAGAAA
ACACACTAAAAGACACAGAGAAAGAAGATCACCCATAGATATAGATTCAA
TGGGACGAATGACGAAAGATTACTGGCAGAGTTATTTGAATGACAGCTGG
TATTCAAGTTTTCCAAATTGTTCTCGATCGAAGATAGAGAAAAAACGAGC
CAAATTTTTACATTCGATTTTGGATGGTCCAGGCGAGGCTTCCGCTGAAG
ATTTAAGACATAAGCTTTATGGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000022_pilon | genome | sc0000022_pilon:2125833..2127969 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1177-1938:763 |
| Aaloc | 1-1173:2138 |
|
