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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000301_pilon:173501..182034- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040762 ID=XLOC_040762|Name=XLOC_040762|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8534bp|location=Sequence derived from alignment at sc0000301_pilon:173501..182034- (Clytia hemisphaerica_ch_hm2_pilon)
GACGAATTTTCGAGGATAGCTAGAGACATTGTGAATGCTATACCAAGCTT
GAAAATCTTCAAAGAAAAAAGTAAGCTTTTATGTATTTGTATGAAACCAG
CCATATTACGCACACTGATACGTACCAGTAGCAGAAACGTGCAAATTATT
CTCGTTTCCAGATCAGAATTTTATATCACAAAATTTGAAACAAAAATTCC
TACCACAAAATTGAAAAGAAGGACTTGGTGCTATTGAAACTTTCTGAACT
TTGAAGGGAAATTCCCTCTTCGAGGGTTTCTTCACACCCCCTTCTTACAG
ACCGCCTTCTCACAGACCCACTGGGACCCCTTTTCACAGAAAATTGGCCA
AAATATCGTTCCCGTAGGAAGATTATACTCTAATTTTTGTCCCTACTGAA
AATAATCAGTTAAGAAAATCCTCACTTCAAAGTATTGTACTCTTTTTTCC
ATCCCCACTGAGTTTTCTGACTTGAAAACAAAAGAATATGAATCCCCAGT
CATAAACATTATAATAATAATAATAATGTTTTACAGATTTCCAGGCCACC
GTGCATGCACATGGGCCTCTATAAATCGCTCATACATTGGTTTGGTTTAT
TACAAAGGTTACTAAACCGATCTTGTTTTACAAAATATCTTTTTTAAATA
TAATCCTCCTTGAGGACTTCCTCGCACTCTCCATTTGTAATCACTCTGCG
GCATTGCTCGATTTCTCTCGTTTGCTTTACTTCTCCATTCTTTTACTTGG
TCTCTTTCCATTATTGTTAGATCGTCTGTGATGCTCATGTTGGCGTACTT
GTCGTACTGCTTCAATTCCCTTAAGTTTCTCATAAATTTGTATTTTACAT
GCCCGCCATTAAATACAACTTTGATTGGTCGTGTACGATTTGATTCTTTA
CCAATACGGGAGACGTAAGTTGGCTCTGTGTTTATTTTAACGTCGTTTAG
GAGTTCGTTTACGAAATCATTTTCATCTCTATTGCTATTCTCTTCCACTC
CATGGATGATGATGTTAGCTTCCCTTGATTGCTTTCTCTGTTCTTCCATT
TGTTCTTCGACCTTTTCGCTGCGAAGTATTTGTTTCATGCTGGATATATT
TAACTCGTCATTGGTTTTCGTGATTTCGGCAAAACTTTTCTTTGAATTTG
TTTTCGTTTTGTTATCTGTAGGTTTCGCATTCATTGTATCTTCGATTTTA
GTGGTAAGTTTAGTTTCCAGCGCTAAAAATTGAGCTTGAATTGTATCGGC
AACATGGTTCCTTTCTTTAACGTATCCCTGACATCTAGCTTGTAATTCTT
TAACCGCAACATTCAACTTCCTTTCATTCTCGTTTTTCACCTTGATAATA
TTTTCGCACGCTTCAATTTCTTTACGGCTATGTGTGCAGCTTTTGATTTT
CTCTGATTGGTCCAAGATTTTTCGGTGTAGCTCTTGATCGATGGAACAGC
AATTTATGCATTGGTATTTTCGATAGCCTTTATTCAGGAACATTTGTATT
TGGTAAGATGGAAGTCCTGTGCATGCATAATGCAGGGTTCGTTGACATTT
ATGACATTCTAATCTCATTTTGTCGTCATCTTTTATGCAATTTTGTTCTG
TACATCGATTTGCAACATTTTCGATTTCATCTCTTGTTGAAATTCTGCTA
GGCGATACCGTTTTTTGTTGAAATTTGGTCGTTTTTTTCATGTTTTTGTA
TTTTATTATGGGAATATAAATCCCCATCGAGTTTTAGTCCGTTATTTTCA
TCCCCACTGGCTGAAAAAATCCTACCGGGTCTGTGAGAAGGATGTGTTTC
TTTAGCTATGAAACTATTGACGAAAAAGGGAATTTTTAGAGTGGACATTG
TTGAGTTTTCTAGCTCTAGATTGGCTGGGGCTGTAACAGTACTTCAGGAC
ATCATATCTTGCCGCCGTTCGTGCAAAATAGGTAGATTAGGTAGATTAAC
ACGAAGCCAAAGGTTTTCTTGAACGCATCATGACTAAAAATGAATAAGAA
GAAATTGACACTTACTAAAAACACTGTGGCTGAACACACAAGTACACGTC
AACAGATACTCTCAACTAAACACTCACAGCTACATCATATAAATTTGTAA
CACATAAGACAAACCTCAAGGGACGAACACGTAACAATACACACAATACA
ATACAATACGATACAATAAACAGCTCCCTAGACACATAATATACGCAATA
CACGTGAGACTATAATACAAAATAATAATTAGGCAATTATGGATTTATAA
TTAAGGAGGCCTTCCAGTGTAAATGCGTCCATAAAGTCCCATCAAATGAT
AAACTAAATACAATAAAGATAATGAAAACAAACGTAAAAACAAAACGACA
AATTATCTGCACTTCGGTAGTTACATCATACGCAACCAAATAAGTAGTTT
GTAATTTCTGACAGAAATCATAGAAATGGAATAGAAAAAGTGCTTCTCTG
ATTACCCGAAATGTTCTGATCGTGTCTATTGAAAACTCCTTTGTTTTAGC
TTTAATTTGGTCGTTACAAAAAGTTCAGAAAAAAAACGGCTCGCCATGCG
AAGCCAGCCCTCTTCGCATGGCGAGCCGTTTTTTTCTGAACTTTTTGTTA
TTTCTATATGCTGTGTTTATTAAAGTGGTTTTATGTTTTTCGGTTTTTGA
TCCATTACTTTTTAAACTTTCAGTACGCAGTAACAAATTTTACAATAACT
TGTAGTCTGAAAAATTCTCATCATAATGATACCAAATTATTTCTAAAAAA
ATTGATAGAAATTCATCAAAGACAGATTTGATTTCTTATTTTCGTGCACT
TTAGCTTTTAATCTAATTATGCGGTCATGATGCCGTTATATCATTAGAAT
CGCTAGAAAATTCTGAGCAAGAAAATATAGGTATCTTTTGGTATAAAAGA
GGTTTCCCCAAAATATAAGCCCCTAAAGTTTACGCATAATTTGAACTGAA
ACAAAAGAATTTCGCCATACCACGCTAATGATACAACTTTTTTAAAGCAA
CAACAAAAGAAATCCATTAGCTCGAAACAAACCCTCTCAAGGGCAAAGGA
CCTGGTATATGACGAGCCGTTTGTCTATTGTTCTGAAGAAGCTGTTTTTC
CATCTCTTTACATTCCTCTGCTGAATTATCAGTCACCATTTTATGACTTT
TTAGATTTACTTGACAACCTTCGGAAAGAGCTTCAGGAAATACACCAAAC
AAAATAGTAAGCAATTTCATTAGATATTTATCTGTCAGCCATGATATATT
TAGTTTTTTTGTTTTCACAAGACTTTGGCCGAGGCTCAGTTCTCGTTTTT
CATGATTTCCAGGGGCTTAAATTTTCTGAGAATATTTTGATATGCTTACA
CTTATTGACTTACGGCCGGTCTCCACTTTCGCGCGAAATGGGCGACAGTT
TTTTTCTTAACCTTATTTGCCTGGAGAAAACATTACGTCATAAAAATGTT
TCGCGCGAACAAAAAAAAAGTTGAAGGAAATTCTACTTTTTTCAACCGTT
ACGTCAGATTTGACCAATGGACTTGCTTCATTTTTCAACCGACCAATGAT
CTTACAAAAAGGTTTTCGCTCATTTCGCACGAAAGTGGAGACCGGTATTT
AAAATGGGCTTGCAATCAGTATTTTTTTAATCATTTATGAAATCTTAGAC
ATGGGCCATTCTTAATTTGTTCTCAGGTTTTGGCCAAAACAAAATGAGCT
TCTTATAAAATTGTTCTTATAAAAAAATACTATTCGCTCTTTCTGATCTG
TTTTAACGGCTCTGACCATAGTGAATTTTTCATAATTGCCATGTAGAAAA
TGTATTTTTCTGACAGATCTACGCAGCAAAACCATGACATGTTATACATT
TTCTGTTAGGCCAACTATTCCTGAATCTAAAAAAGTAAAAATCACGATTA
AAAAATTTGATGAAAAATGCAAAGACAAGTATTTCAACTTTGAGGACCTT
ATTTTCGGCGAAGAAAAACATTTTGAAAAAGTTTTTGCGTAACTTAAAAT
AGATTTTCGGAAAATTTTTGTAGAAGCTTCTTCGTCTCAATATCTTAAAA
ATAGTTGTTTTTGACCATTTTTTCAACCGAATTTTTCGTACAAAAAGAGT
CATAACTTTTGATACATCAATTTGGAAAACTTTCCGAATTTTTTTAGATA
GTTCAATCTTTTGCAGACGATTTAAAAAAAATTCGAAGCAAAAAGGTTGA
TTACCCATTTTTTGTAAAAGAGGGTAACATAACATTTTAAAATAAATTCA
CAAACAAGTTATAAAGACAGTTTTTTTGTTAAAGGTGTCAAGGAACGCAA
AACAAAAGTCCTATCTTCAAATCTCATAACAATTTTTTTGACTATGGTCA
GAGCCCTTAAGTATGACATTATGGGCAGAATAAAGTTTTTTAAGTTGACG
AAATATTTATTTTATAACTTTCTATCAAAATATAACATTTTCTCGTTACA
GCGAACTGAAGATTATTCCGAAATTCGACACAGAATTCTCTCAAAATACA
AGTAAAGCTTCAAAGTTTTGTATTTAGATAAGAGAGTATATTGTTTGCTT
ACTCATCAATTTTGATTTAAAAGCTTATGATATAGAATTGTCACGGATTT
GGAGCAAGATTGGTCAGAAAGAGGAAAAGAAAAACATTTTTTTGCTTATA
TCAGCACAGTATATCAATAGGCAGACACTGTCCTGATATGAAACGGGAAC
ACTAAGTAAAAATAAAACCTTTGATATCATTATTTGTTTCAAAAAACTAT
TTTGATGCTGAATAAATACAAATTCTTCTCGAAAAAACAAGTGTAGGAGC
TCTCCTGGGAATGGCATGGAGTTCGGTATGAGTCAGCCTAAAAATACCTT
ACGCCGAAAAGCAATTTCCCCTGCATATTCATTACCAGCCCCCTAAAAAG
ATAAGCTAAGGGTTGATATGTTTTTTAGTCACCTTATACGTGCATGTATT
TGTCCTCTTTCAAAGAATAAAGGAACTTTCGAATAATAGTTCGATCAAGA
AATTTATCCTTTTACTCATATACATTATTATGACGATGGATGTTTAGTTT
ACTTTTACATTTTCAGATGAAGACTTAGTTCCAGCATCAAAGAAACATTG
TAGTTTTGAAGAAATGGAAGAAGTCGACCCTAATATTCCACCGGAGGTTT
GTAAAGGGCTCTTCCAGAAAGTTTCTGTACATGGGGAGTGGATGATAAAG
TCTCCGGGGGTAGTGAAAAATCTACAAAATTTGTCTTGTCTGCTGGGCAA
ACTTGCTCTGTTTGGCGGTAATTTTGCTCTGTTTGAGGATAATTTTGAAT
GTTCCGGGGGTCAACTGATGCTTGTCCGGGGGTCAAAACTCGGAGGTAAA
TTTCCAAAAATTGTTATATTCTCCACCCCCTATATTCAAATTTTTTCTGG
AAAAGTCCAAAGAGCTGAAATAGCCACGATTAAAAAACGGCTGGTGACTT
ACAAGGCCTACGATATTATCTGGCAATCGGATGACGGAAGGGAGAAAACA
TTGACCTCTAATATGCCTTGAAATATGCCTTATAATACCCCGCCTCGTTA
TTTTAAAATACTTTCAATAGCTTTATTCCTGAGCAAAATCAGTCTAAAAT
TGGGCCATTTAGGCCCATTTAGGTCCAATTTTAGACTAATTTTGCTCAGG
AATAAAGCTATTGAAAGTGTGAATCGTGATATTTTAAACTAACGAGGCGG
AGGGGGAGACGCCCCAGTTAGCGCGAGTCCTAACTTAACTTGTAAAGCTT
ATTTAGTCCCCCCTGAAATGTTTGAATTGTTTGCATGCTATAAATCCTCG
AATGAAAACGGTTTCTAGTATTCGAACAGTTATTGATTCAAACAGTTATT
GAAAAAAGTCGAATCCAATAAGCTTTAAAACTAGAAATTCATGACAGTAA
ATAAGTCAATCAAATGTCTTATTTAGGCGATTCGGAAAAATATAAAATAA
TTTTTTGGCAAGAGTAGAAATCGTCTATAAGGAATAAATAACGATTTTAG
TCCAAAGTTTCTTTCTAGTAAATTAGTTAAAAGGGTTACAATAGGGTAGT
CAGGGGTGAAGGAACATTTGCATAGGAGAGCAGATTTAAACGACATAGTA
ATTATGTTTTTATACCACGAATAGGCAAGTGCTTTGTCATAAAAATCTGC
TCTCCTGTGCAGGTCGTTCTTCACCCCTGTCTACGCTACTGGGTTTGAAA
ATTGAATTAAAGGATTTCGTTTTCAAAATAATACACCTTTGACATTGTAG
ACGGAAAAGGTAATGATAATAACAGCCAATCAATATGAAGAAAAGCCACC
TTCGATCAAACGTATCACGGAACAAGAAACCCATTTCACCGCCCACCACG
CCCATATTCATCAACAACAGCTTGATTTCAACCAACAGATATTACCAAGC
GTTTTCCCTGAGGTTTGTATGCGATATGCAGGCTATTAATGGATAGCTAG
ATGCTTTCTAGTGTTGTATGCACTGATTTCTAACTACCGGGTGCGCCACA
AAAAAGTTTCCCTCTTTAAAACTAATTTTTCTCAAAATCTAAAAATTTTA
AAAGAACCTTCCTAATTCATGAGAAAGAAGAAAGATCAACTTAAATTTTG
ATGGGTTATATATTAAATTTGATTCATTAGATCAAAAGTTATGCTCAATT
AAATAAAAAAGTTACTTTCTGAAAGTGCTCAAAAAGGTTAAAAATCAACC
TAACAAATTAAACGGAAGCATAATTACTTGATACATCAGTATTTTCGCTT
TAGTCATTAAAAATGATAATTAGCTGTCTAAATGATCTTTTGTTGTATAA
AGGAAGGTTTAATTTCAACAAAAGGCAGAAAATTCGTCGAAAAAGGCCAA
AAATCCAGTAAAATTCATAAAAATACATAAAATATGGGTTTTGCGGTAGA
TCCAGTCTTACTATACTTTATCCAATCTAAAACCAAAAATGTGAGGAAAA
TTTGGGTAAAAGTAAATAAAGTGATTTTGATTAAGATTTTAAACCCTTTT
GACCCTTCAGTTTCGAAATTTATGTTTTTAATTACTTAAAAATGTTTTTA
ATTATGTAAAGGCTATCGTGATTGCCAATTTTGAAATGGAAATTTGTTAG
GTCGATTTTCAACGTTTTTGAGCACTTTCTGAAAGTAACTTTTTTATTCA
ATTGAGCATAAATTTGATCTAATGAATCAAATTTAATAAATGACCCATCA
AAATTTAAGTTTACCTTTCTTCTTTCTAATGAAATTGGAATGGTTCTTTC
AAAATTTTTAGATTTCTAGAAAATTAGTTTTAAAGAGAGAAACATTTTGT
GGCGCACCCGGTATTTGACTGGATCTCGCTTCCCATATAAAAGGAAACGT
GTCCAAATTTAGAGCTGACTAGTCAGTCATCTTGTTTTCAATTCTGGTCG
TGAACAGCGCGATTTGATATTTGGATATTTGAACGTTCGAAAATCTAGAA
AACTACATTGGGCCTATACAACTGCAAAACTAGACACACTTCCACGGGAA
ATCTGTGAGCAGTTAACCTATTTAGGGATATAATATCGGTGGTTTTTATG
TTTGTTTTGAAACCTTGTCTGTTGTTGTCCTTTGTTGCACGATGACTGTT
TTAAATTTCTTTAAATAATTCTTTAACTGTAAACAATTACTTAATCACCA
GCATCATTTGGAGGATAGTTATCTTTATTATACGTCCCTCGAGGCTTTTG
TAATTTTCTATGACGTCACATTTATTGTCCTTCGGGAATCAAACTTTGAT
TTATAAACAGCATATTGAAACGTAGCTAATTTGATACTCGTCACTGTTAT
TTATGAAGACTTATGAGAGGAACATAGTGTTTTGATGTGGAAAATTTGAT
ATATGTTTTGAAGATAGTTTTATAAGCCGAAGGCTTTTTTACAGACTCAA
ATTCATGTTTGAACACAAATCCTTTACATTAACAATTATCATAATGTATA
GCACCTAAACTCTCCAGAGTTCTCAATCCATATCTCAAAACTTTCATATA
AGAAATCGAGATGAAAAGATTTTTTGGCTTCTAGCCTTTTTGTTGTTTTA
TCCGTTTTAGCCAATGGAGGTAACAAGTCAAGAAACAAACAGCCGACCAC
AATTCTTCTTTACTAACGAACAATTGAACAGCCACGAACCAATCAACACC
AATTTCTTCGCCCAACGTCAGACCACATCTTCTTTAGAAGAAGAACGACG
AAATTACACCGACAAATGGACGGCGTCCACGTTGCTACAGCAACCGATAA
GTTCATTACGATGTAATCGACGTCGATCGAGTCGACAGACTTTCGAAGAA
ACCGATTCAAATCGATCCCAAACCGATTTACTCGATTTTATCGATAACAT
ACCGATCGATGATTTAGAAAGAAAGCTATTAAATCGCGGTAGTGTCCATG
AACAGAGAGCGGTCGCCTTGTCGCCACCTGGTAGGCTACCTGCTACCGTC
AGTAGACATCATATAGCTTCCTTGGAAAGACCAAAAGTCGGTAGCCCATC
TCCTCCAAAAATGTACCGTATGAATATGTTTTAA Coding sequence (CDS) from alignment at sc0000301_pilon:173501..182034- >XLOC_040762 ID=XLOC_040762|Name=XLOC_040762|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1776bp|location=Sequence derived from alignment at sc0000301_pilon:173501..182034- (Clytia hemisphaerica_ch_hm2_pilon)
GACGAATTTTCGAGGATAGCTAGAGACATTGTGAATGCTATACCAAGCTT
GAAAATCTTCAAAGAAAAAAGACGAATTTTCGAGGATAGCTAGAGACATT
GTGAATGCTATACCAAGCTTGAAAATCTTCAAAGAAAAAAATTTACTTGA
CAACCTTCGGAAAGAGCTTCAGGAAATACACCAAACAAAATAATTTACTT
GACAACCTTCGGAAAGAGCTTCAGGAAATACACCAAACAAAATACGAACT
GAAGATTATTCCGAAATTCGACACAGAATTCTCTCAAAATACAACGAACT
GAAGATTATTCCGAAATTCGACACAGAATTCTCTCAAAATACAAATGAAG
ACTTAGTTCCAGCATCAAAGAAACATTGTAGTTTTGAAGAAATGGAAGAA
GTCGACCCTAATATTCCACCGGAGATGAAGACTTAGTTCCAGCATCAAAG
AAACATTGTAGTTTTGAAGAAATGGAAGAAGTCGACCCTAATATTCCACC
GGAGACGGAAAAGGTAATGATAATAACAGCCAATCAATATGAAGAAAAGC
CACCTTCGATCAAACGTATCACGGAACAAGAAACCCATTTCACCGCCCAC
CACGCCCATATTCATCAACAACAGCTTGATTTCAACCAACAGATATTACC
AAGCGTTTTCCCTGAGACGGAAAAGGTAATGATAATAACAGCCAATCAAT
ATGAAGAAAAGCCACCTTCGATCAAACGTATCACGGAACAAGAAACCCAT
TTCACCGCCCACCACGCCCATATTCATCAACAACAGCTTGATTTCAACCA
ACAGATATTACCAAGCGTTTTCCCTGAGCCAATGGAGGTAACAAGTCAAG
AAACAAACAGCCGACCACAATTCTTCTTTACTAACGAACAATTGAACAGC
CACGAACCAATCAACACCAATTTCTTCGCCCAACGTCAGACCACATCTTC
TTTAGAAGAAGAACGACGAAATTACACCGACAAATGGACGGCGTCCACGT
TGCTACAGCAACCGATAAGTTCATTACGATGTAATCGACGTCGATCGAGT
CGACAGACTTTCGAAGAAACCGATTCAAATCGATCCCAAACCGATTTACT
CGATTTTATCGATAACATACCGATCGATGATTTAGAAAGAAAGCTATTAA
ATCGCGGTAGTGTCCATGAACAGAGAGCGGTCGCCTTGTCGCCACCTGGT
AGGCTACCTGCTACCGTCAGTAGACATCATATAGCTTCCTTGGAAAGACC
AAAAGTCGGTAGCCCATCTCCTCCAAAAATGTACCGTATGAATATGTTTT
AACCAATGGAGGTAACAAGTCAAGAAACAAACAGCCGACCACAATTCTTC
TTTACTAACGAACAATTGAACAGCCACGAACCAATCAACACCAATTTCTT
CGCCCAACGTCAGACCACATCTTCTTTAGAAGAAGAACGACGAAATTACA
CCGACAAATGGACGGCGTCCACGTTGCTACAGCAACCGATAAGTTCATTA
CGATGTAATCGACGTCGATCGAGTCGACAGACTTTCGAAGAAACCGATTC
AAATCGATCCCAAACCGATTTACTCGATTTTATCGATAACATACCGATCG
ATGATTTAGAAAGAAAGCTATTAAATCGCGGTAGTGTCCATGAACAGAGA
GCGGTCGCCTTGTCGCCACCTGGTAGGCTACCTGCTACCGTCAGTAGACA
TCATATAGCTTCCTTGGAAAGACCAAAAGTCGGTAGCCCATCTCCTCCAA
AAATGTACCGTATGAATATGTTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301_pilon | genome | sc0000301_pilon:173501..182034 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 415-888:475 |
| Aaloc | 253-414:2285 |
| Aaloc | 175-252:3467 |
| Aaloc | 124-171:4083 |
| Aaloc | 73-120:5379 |
| Aaloc | 1-69:8535 |
|
