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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000301_pilon:201521..206198- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040760 ID=XLOC_040760|Name=XLOC_040760|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4678bp|location=Sequence derived from alignment at sc0000301_pilon:201521..206198- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAAGTGGACGTTATAATAAGAAGAAGAAGGAGAAGAAAAAGATTGA
AGAAGAGCAAAATAATGAGAATGTAGAAAGTCGGAAAACGTCAAAGTCTT
CAAGACATTTTTATGTAGGTAACACGAGTGAATACAAATGATTAGTTCTG
GTTTGGCTACATGGCTTTAGCTCACTCCAGATTTCTAAAGGGAGCCTAGC
CTTTTCGTTAGAGGGGAGCTATTTTTTGAACCACCCTGGATTTTTGACCC
CGTTTTACTGACCACCCTACCTGGATTTTTCACTTTATTTTAACTGTACA
CCCTGGATTTTCACACTTGGAAAACCAGACCACCCTGGTTTTTTATTTTC
AAGACCACCCTGGACGTAACACCTCCTCAACATAGGGGGTACAGACTATT
TCCGGAATAGCCTAATTTTGATTAGTGGCTGCCCTTTTTATAGCAAAGGA
ACGACACGAGAACAAAAAGTGTCAATTCAAAAAAAATTCTCAGTTAATCG
GGGAGCTTACCTACCTAAGTAGATTTTCAGTTTAATGGAGGTACCTAACT
GAAGGCAAATTTTTAAGGGGATCTAATTCATTGGGGTACCATACTTCGTT
TTGGGTACACGAAAAGTGGGGGCTGAAACCATGGGCTGTTTGTTGAATTA
AAGATAGAAATATATTTATGATCCTGCTTGGTCTCTTTAAATCATTAGGT
AAGAATTATTACTATGTCATTCCTTTCTATACTTTCTTTCTTCAGTCTTT
CCTCAGTCAATAAGTGCTTTTTTTAATCAAGTGTTCTTTAACAATAAAGA
GAGCCATTGTTTCTAAGTACCAAAAACTGATCCTGCATATGCTTATAAAC
GTTATGTTATAAAAGAAACATGTATTATGTATAATCTGAATTTTCTAGTT
AAAACAAATTAACCGGTTCATCTTTACATCTTCTTACAATGATGTGAGTA
AAGAAGAGAAGTGAAATATTTGTTATGATGTGCATCCATATTAACTTAAT
AACCATCAAGCAATTTTTTAAATCCATAGAATCAGACATTAGATGCGGCA
CAACGTAAACGAGGCTGCGAAGATCATTCCAAAATTGATAGCTCGATCAT
CACAACAAAAAGACTAACTGTAAGTAACATACATTTATCTCTAATGTAGC
TGGGGCATAATACTACCCTCTGTGATTTCACTCTCAAGTCTCAAGATTTG
ACTCAGTCTTTCAGATTGTTTTTTGACTGAATTTTGCCATCCAGTCTATC
AAAAAAGCAATTAGTGGCTTACGGTTCATCGAATCAATCTGGATCAACAA
AACCTTTCTTAATATTTGTTTTTCACAAGTAAAAAGGCTAGATAGAATCT
TCCACGTATTCCGTATACTTTAGGCGTACAAGTACAGAAGGCGTGCAGAA
ACTTTCGCGAGGTTGAAAAATATTTACTTTCACCAATTTGAGGAAAAAAC
GTTTTTCGCTAGCATGAACTTTCGCGAATCGTTGGATAAAAATGAGAATT
TTCGAATAAAAATTGCCTTAAAAGTGAAAATGTTTTCCTTAAATCCGCTA
AAGACGGTTGCTCTTCAACTTTAAAAAGGCATTAAAGGATAACGGTATGC
CGAAAATTAGATATTTATTACGATTTCGAGGTTATATAGATTTCCAATTG
TTTTGAGAATTTTTTTGCAAGCATAAACTTTCGCGAATTGCCCTGTTAAG
AATTTTCAAAGACATTTACTTTCGCGATAAAGTTTCTGCTCGTGAAAGTT
TGTACGGTTAAAGTACTCCTGGTTGTAGCTAAGATATCCAGATAGTCCTT
TAGACTTGGGACTGATTTTCCTCGTTCAACTAGCCCAGTCATCTAATTTA
AACTGTTCAGAAAAACATTGCTGACTTTTTGAAACTTAATTCTCGTAGGT
TGGTGTAAAAGGGATTTTTGGTAATGCCAGAAACTCGAATTCGGTGTACA
GGGAATTTCAAAAGAAGCTCGATAAACGAAAGGTATGTTGTAGTATTGCT
TTTCCGCTAAAATCATTAAACAATACACGGAGTCTCTGGGACTTACTTCC
CATACCTAACTTTTGTCTTGATTTTTGAATTATTTATAAATTGAAATGAA
GTGCCCATTTTTTAAGTTTTGTCCTAAAGTCTTGTCTTGGTAAAAAAAAT
CATCATCAGATGTAACGGATTTTTTAAAAATATTATTACCCTGGATATCA
TACGCCCCTGGTGTTCATTAAATTTAATTGTGTCTGACACTGGGACTGGA
AAAAGCTTTCCCGGCAGAGCTGTCTAAACATCGACAATAGTGGCAATAAT
AGTAACTTATTTTCACCATTTAGTTATCAAAAGAAGTCTCTTCAGAAATC
GAACAAAATCTCTCGAAGATCTTTCCAAATCGCAAGAAATGTAATTGTAC
CAATCGAAGTAGTACTTCAACTGAAAGTCATAACGAAGAAACTCGTTACC
AGACTCCTTCCGTCAACGGTTTGTGGTCATTTCATTTTTTCTTAAAGAAT
CTCTTCACTCCTTTAGTAAAACCATAACAATGTGACGGTTCCTGCAACCT
TTTCTCAACTGTCATTGAGTTGTCCGAAGGGCTAGAGGCGAAACTCCTGT
ATGGGAAATGAAACCACTTTTATTTTCCATCCTGAACGCCGGCGCGTATT
TTTTACACAAACGCCGGATTGAATCTAAAATCTATCGCTGGATTTCAAAA
AATGTAGTCCTCCAAAACAAAAGAACCGCTAGATGCAATCCGTCGTTATG
ATTACGGCGCATTATATGCGCGTTTTGGATGGGAAATAAGTGGCTTCAAT
TTCTCTTGCTTGAAAAGGGTTAAAGTTTTGCCTTTAACCCTTCGGGCTTG
AAACTCAATAGTCTCTGTGTGTGTGTATATGTCACAAAACTTTGCAGCAG
CCTGGAGACTTCAAAAATGGTCAGATTTGGCCGACATTTGGCACATCTTG
TTCCTTAATATCTAGGTGTGTCTTTTTCGTTTTTGAAAATAAATTTTTAG
GGTCCTAGGCACTAGTTTTTTTTTTGCTACAATTTTGAAATTTAGATTTG
GTGAAACGAGTTTCCTGGAAATTCTACAACTTTTGTTCTGTGTTATGAAT
GAGAGGCACTAAAGATCATGGTCCTCAATAATAGTAATATAAACTGATAT
AAATCATAATAATAAGTTTTCACTTATAGTAGACCTTTCTTTGATAATTT
TCTCATGATAAATTCAGAATCAATGACCTATCAAAGACCTTCCTTAAAGG
TTTTGTTTTAAGATAAGAGTGATATCGTTTGCTTACTCATCAATTTTAAT
TTACAAGCTTTTTCACATTGAATTGACACAAATGTGGAGCAAGATTGATT
AGAAACAGGAAAATAAAAATATTTTTTGCTTTATATCAACATAGTATAAC
AATAGACCGACACTGTCCTGATATGAAATACACGTTTTTTTTTTATAAGA
ACAAACTATATAAGAACATAAGGCTTCGAGGCCCAAAATTTTAAGAACAT
TCTAAGAACATACTAAGGCTTTGGAGACTTAAAAACATGCAATTTCTTAA
GAAATTACATCAAAATGCTCAAAAAATGCTGAAAATAAGAACATTTTAAG
AACATTTTTAGGCTTCAAATCCAAAAAACTAAGAACATCCGAAGGCTTCG
AAAATTTTTGACGTTCTTATAAAAAAAAAAACGTGTATGTGTCTGATATG
AAACGGAAACACTTATGTAAAAATAAAACCTTTAAGCACTATCGTTCTTC
TTCTATACAGGGAACAATAACAGCACGCCACATTCACAATTAAGAAGCTT
CAAAACCAGGTAAGTCTGTCGTTGCTTGTAGTTTTTTGAAGAGACATAAA
AGTAGTGACGAAATTTGTAAACAAACCGTATGCAGCGGGATACAGAATCA
AAACAAATGTCACATGTCAAAATAAAAAATGATTGTTTCAATTGTTTTAC
AAGTTTGTTTTGGACACTTGATTTTAATTGTTCCCTTTAATGACACGTGG
TTCGCGCAATGTTTACATTTTACTACTTTTATGTCCCTTTAACGCTAATC
GTGTTATCTTTTCAAAAGGGTTGCCATTCAGGCCGAAACTAAATTTGTGA
GATGCTTTCAAATAGGCGAGTAGCGCCTTCATCTATCGTCTATGTTGGGA
GTTAGAGCTATCGAAATTAGAGCCTTTGGATTAATCCGCAAACGATTTCT
GTGTTTATTCTTCTACGGTTATTTTCTTAAACACAATGCTGTCGCTCTCT
AATTCGACTTTCTATTGTACGCTCCACTTTTTCAATAATATTGAAAGTTA
CTGGCAAGAAGAAACTCTCACAAACGAAGTTCTACTATCTGCTACGCTCA
GTTATTCGATAAGATTGAAACTCGCCGTCAACAAGAAAATCCAATTCACC
TTTGAAATCGAATAAGAGAGCGTCAACTGTATTTAATTCGTTAGGTCTCA
CCAAGCAAATCAATCAGTCCAAAGTGCTTCCTCAACAAAATGTTCAACTC
ATTCAACAAGAAGAAGAAGAAATAATTCATCAACAACTTCATTAGAAGGA
TCAACAAACTCGATCAGTTGCAACGAACTCACACATTCAACAACACCCAT
TGTACAGGTATCAACCTTTCCTTTTGGTTTTTCCAGAAAATATTCGTAGG
GGCCGTCTACATAGTACGTACGCACTAA Coding sequence (CDS) from alignment at sc0000301_pilon:201521..206198- >XLOC_040760 ID=XLOC_040760|Name=XLOC_040760|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1432bp|location=Sequence derived from alignment at sc0000301_pilon:201521..206198- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAAGTGGACGTTATAATAAGAAGAAGAAGGAGAAGAAAAAGATTGA
AGAAGAGCAAAATAATGAGAATGTAGAAAGTCGGAAAACGTCAAAGTCTT
CAAGACATTTTTATATGCCAAGTGGACGTTATAATAAGAAGAAGAAGGAG
AAGAAAAAGATTGAAGAAGAGCAAAATAATGAGAATGTAGAAAGTCGGAA
AACGTCAAAGTCTTCAAGACATTTTTATAATCAGACATTAGATGCGGCAC
AACGTAAACGAGGCTGCGAAGATCATTCCAAAATTGATAGCTCGATCATC
ACAACAAAAAGACTAACTAATCAGACATTAGATGCGGCACAACGTAAACG
AGGCTGCGAAGATCATTCCAAAATTGATAGCTCGATCATCACAACAAAAA
GACTAACTGTTGGTGTAAAAGGGATTTTTGGTAATGCCAGAAACTCGAAT
TCGGTGTACAGGGAATTTCAAAAGAAGCTCGATAAACGAAAGGTTGGTGT
AAAAGGGATTTTTGGTAATGCCAGAAACTCGAATTCGGTGTACAGGGAAT
TTCAAAAGAAGCTCGATAAACGAAAGTTATCAAAAGAAGTCTCTTCAGAA
ATCGAACAAAATCTCTCGAAGATCTTTCCAAATCGCAAGAAATGTAATTG
TACCAATCGAAGTAGTACTTCAACTGAAAGTCATAACGAAGAAACTCGTT
ACCAGACTCCTTCCGTCAACGTTATCAAAAGAAGTCTCTTCAGAAATCGA
ACAAAATCTCTCGAAGATCTTTCCAAATCGCAAGAAATGTAATTGTACCA
ATCGAAGTAGTACTTCAACTGAAAGTCATAACGAAGAAACTCGTTACCAG
ACTCCTTCCGTCAACGGGAACAATAACAGCACGCCACATTCACAATTAAG
AAGCTTCAAAACCAGGGAACAATAACAGCACGCCACATTCACAATTAAGA
AGCTTCAAAACCAGGTCTCACCAAGCAAATCAATCAGTCCAAAGTGCTTC
CTCAACAAAATGTTCAACTCATTCAACAAGAAGAAGAAGAAATAATTCAT
CAACAACTTCATTAGAAGGATCAACAAACTCGATCAGTTGCAACGAACTC
ACACATTCAACAACACCCATTGTACAGGTATCAACCTTTCCTTTTGGTTT
TTCCAGAAAATATTCGTAGGGGCCGTCTACATAGTACGTACGCACTAAGT
CTCACCAAGCAAATCAATCAGTCCAAAGTGCTTCCTCAACAAAATGTTCA
ACTCATTCAACAAGAAGAAGAAGAAATAATTCATCAACAACTTCATTAGA
AGGATCAACAAACTCGATCAGTTGCAACGAACTCACACATTCAACAACAC
CCATTGTACAGGTATCAACCTTTCCTTTTGGTTTTTCCAGAAAATATTCG
TAGGGGCCGTCTACATAGTACGTACGCACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301_pilon | genome | sc0000301_pilon:201521..206198 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 649-720:73 |
| Aaloc | 646-648:78 |
| Aaloc | 484-639:234 |
| Aaloc | 436-480:917 |
| Aaloc | 289-432:2356 |
| Aaloc | 205-288:2781 |
| Aaloc | 115-204:3650 |
| Aaloc | 1-114:4679 |
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