XLOC_040757 (mRNA) -

Overview
NameXLOC_040757
Unique NameXLOC_040757
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000301_pilon:304692..306247-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040757 ID=XLOC_040757|Name=XLOC_040757|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1556bp|location=Sequence derived from alignment at sc0000301_pilon:304692..306247- (Clytia hemisphaerica_ch_hm2_pilon)
AGGTATTTTTGTGATTACTGTGACACCTACCTAACGCATGACTCAGTAAG TTGTTTTGTATTATTTTGAAAATTGGTTTGTAAATAAGCCTTTTCATGAA CTTGACTGAACTTAACTTGACTGATTCGAAAGGATTCGTTGCCTGAGAAA ATTTCTTTATTAAATAATTGAAGATTGTATGATCTGCAAATTTGGATAAT TTGCTGTGCCATTATAATTATATATTATTATTAAAGGGTAGTACCTAAAA AGCATTCTATTTCTTCAGAACTAAACCATAAATTGATTTTTGCTTTTCCC CACAGCCTTCAGTAAGAAAGACACACAACAATGGACGCAAACATAAAGAC AATGTCAAATTTTACTACGCTAAATGGATGGAAGATCAAGCCCAAGCCTT GATTGATCAGACCAGTATGTTTTGTTTTTGTTCCACCAGATTTTATTTAG TCTTTATCTATTTCACTTTTTTTTGAGGTTTCAAACACCAAATACTGAAA CTGATGTAATCTTTTTCCAACTGCATCCACGTTCGTTACTACTGATTTCT CTCTAAGCAATTTAGGAGAATTTCAACTTTTGACTACTAAGTTGTGTAAA AGATTGACTAGGTTTCAAGTTTTTTACCATTTTTTTGCCTTTTCATAAAA TACTGTTAAATTTATTTTTTTTTCAATTTTTTAGTCAAGCAAGCAGAGAA GTCTACCAAGAACTTGCCTCCTGGAATGAATATGCCCCCTGGAATGATGC CCGGTATGATGCCACCACCCGGTATGCCAGGGATGCCTGGAATGCCGGGT ATGCCACCAATGCCCTTCGCTGGAATGCCACCTATGCCACCAGGTTTGTT TTATTATAATGATGTCTTTTCAATCTTTCAATGGCTATTCATTGCTTGCA ATGGTGTTTATTTTCATTACTGCCTTTTTTTATTTGTAATGGTCTTTGAA ATGTCTTCACTTGATCTCTTACTCACTATTATTTCCCTCACTAGCGTATC AAGTTTCACAATTCTGCCTGTTCTTTTCCTCCTACTACTTCCTCACTTTC ATCGTTCTTGCTTTCAAGTTCAGTCTCTTGCCCAGATCTTATTTCCGTCT ATGAAATCTCACTTGTGATAAACAAAGTACATAACTCTGCATAACTTATA ATATAATATAAATCATCAATCATCACTTATTAAAACCTTAATCATCCACA TCCATAACCACTCTTTTTTATTCCATCTTTTTCAAGGTATGATGCCTCCA ATGCCTCCAGGCATGCGACCTCCTGGTCCTGGTGGTCCAATGAACGGACC TCCCGGCCCCGGTGGGCCACCAGGAGCTTCAAATCCTAATAAACGACCAG GAGGACCCATGAGCGGAGGACCCCCCGCACAACGACCTAACGGCCCAGGA GGACCTGGTGGTCCACCTAATCGACCAAATATGAGGGGTGGACCCGGCCC TAATATGAGAGGACCACGGCCAAATATGGGTCCAGGACCTTTAATGGGTA TCAACGCTCGCCCACCACAGGGTGGCCCACCAAATCGACCACACTTCAGA AATTGA

Coding sequence (CDS) from alignment at sc0000301_pilon:304692..306247-

>XLOC_040757 ID=XLOC_040757|Name=XLOC_040757|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1266bp|location=Sequence derived from alignment at sc0000301_pilon:304692..306247- (Clytia hemisphaerica_ch_hm2_pilon)
AGGTATTTTTGTGATTACTGTGACACCTACCTAACGCATGACTCAAGGTA
TTTTTGTGATTACTGTGACACCTACCTAACGCATGACTCACCTTCAGTAA
GAAAGACACACAACAATGGACGCAAACATAAAGACAATGTCAAATTTTAC
TACGCTAAATGGATGGAAGATCAAGCCCAAGCCTTGATTGATCAGACCAC
CTTCAGTAAGAAAGACACACAACAATGGACGCAAACATAAAGACAATGTC
AAATTTTACTACGCTAAATGGATGGAAGATCAAGCCCAAGCCTTGATTGA
TCAGACCATCAAGCAAGCAGAGAAGTCTACCAAGAACTTGCCTCCTGGAA
TGAATATGCCCCCTGGAATGATGCCCGGTATGATGCCACCACCCGGTATG
CCAGGGATGCCTGGAATGCCGGGTATGCCACCAATGCCCTTCGCTGGAAT
GCCACCTATGCCACCAGTCAAGCAAGCAGAGAAGTCTACCAAGAACTTGC
CTCCTGGAATGAATATGCCCCCTGGAATGATGCCCGGTATGATGCCACCA
CCCGGTATGCCAGGGATGCCTGGAATGCCGGGTATGCCACCAATGCCCTT
CGCTGGAATGCCACCTATGCCACCAGGTATGATGCCTCCAATGCCTCCAG
GCATGCGACCTCCTGGTCCTGGTGGTCCAATGAACGGACCTCCCGGCCCC
GGTGGGCCACCAGGAGCTTCAAATCCTAATAAACGACCAGGAGGACCCAT
GAGCGGAGGACCCCCCGCACAACGACCTAACGGCCCAGGAGGACCTGGTG
GTCCACCTAATCGACCAAATATGAGGGGTGGACCCGGCCCTAATATGAGA
GGACCACGGCCAAATATGGGTCCAGGACCTTTAATGGGTATCAACGCTCG
CCCACCACAGGGTGGCCCACCAAATCGACCACACTTCAGAAATTGAGTAT
GATGCCTCCAATGCCTCCAGGCATGCGACCTCCTGGTCCTGGTGGTCCAA
TGAACGGACCTCCCGGCCCCGGTGGGCCACCAGGAGCTTCAAATCCTAAT
AAACGACCAGGAGGACCCATGAGCGGAGGACCCCCCGCACAACGACCTAA
CGGCCCAGGAGGACCTGGTGGTCCACCTAATCGACCAAATATGAGGGGTG
GACCCGGCCCTAATATGAGAGGACCACGGCCAAATATGGGTCCAGGACCT
TTAATGGGTATCAACGCTCGCCCACCACAGGGTGGCCCACCAAATCGACC
ACACTTCAGAAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040757XLOC_040757-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000301_pilongenomesc0000301_pilon:304692..306247 -
Properties
Property NameValue
Aaloc322-639:319
Aaloc163-318:871
Aaloc52-159:1252
Aaloc7-51:1557