XLOC_040737 (mRNA) -

Overview
NameXLOC_040737
Unique NameXLOC_040737
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000055_pilon:1546220..1546879-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040737 ID=XLOC_040737|Name=XLOC_040737|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=660bp|location=Sequence derived from alignment at sc0000055_pilon:1546220..1546879- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACACGTTATTTGTCCGAAGTGTCCGGTTATTACGGTTGTCAGTGGAA ACCAAAAAACAACATGGCAGCACACAAAGAGAAATCATACCACCAGATGA CTGAAATCTTACAACAACGTGAAACAGATTGTCGCCGTTTGCGTTTGAGT AGTTTATTCGAGACTATGCCGAAAAATGATATACATATCGAGGGTTACTC GCCGTCAGCCGTACGTAAATTACGCGCAAAGACAGTACCACCACTGCAGA ACATTTACGAAGATACGATATTCTATCCTAGCAACTGGACTTCACCGTCA CTCACTAAAAAACAACGCCGTGAGAGAATGAACAAAAGGGCCGCATCCAA AAAGCCAGTCATTGCAATAATTGATGAAAACAATAACAATAATAATAATG GATTTATGAAAAAGAACACTGCGGCCGCATTGCGCATGACTGAAAAATTC GAAACAAAATACCATTCACCTCAGTTAAAACGTAAAGCGTTTGGAAAACA TAATTTGATTCCATTACCTGAGGAAAAGATCACTCGCTCCTTTGATGAAA GCGTTATTGAGGAGACGGACGAGGAGGAAGAAGAAGCTCAGCAACAGGTA ATCGTTCGCCGTGGATCGGCCGGTGAACGACGTTTCAGACCTAGATCATG GTCTGAGTGA

Coding sequence (CDS) from alignment at sc0000055_pilon:1546220..1546879-

>XLOC_040737 ID=XLOC_040737|Name=XLOC_040737|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1320bp|location=Sequence derived from alignment at sc0000055_pilon:1546220..1546879- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACACGTTATTTGTCCGAAGTGTCCGGTTATTACGGTTGTCAGTGGAA
ACCAAAAAACAACATGGCAGCACACAAAGAGAAATCATACCACCAGATGA
CTGAAATCTTACAACAACGTGAAACAGATTGTCGCCGTTTGCGTTTGAGT
AGTTTATTCGAGACTATGCCGAAAAATGATATACATATCGAGGGTTACTC
GCCGTCAGCCGTACGTAAATTACGCGCAAAGACAGTACCACCACTGCAGA
ACATTTACGAAGATACGATATTCTATCCTAGCAACTGGACTTCACCGTCA
CTCACTAAAAAACAACGCCGTGAGAGAATGAACAAAAGGGCCGCATCCAA
AAAGCCAGTCATTGCAATAATTGATGAAAACAATAACAATAATAATAATG
GATTTATGAAAAAGAACACTGCGGCCGCATTGCGCATGACTGAAAAATTC
GAAACAAAATACCATTCACCTCAGTTAAAACGTAAAGCGTTTGGAAAACA
TAATTTGATTCCATTACCTGAGGAAAAGATCACTCGCTCCTTTGATGAAA
GCGTTATTGAGGAGACGGACGAGGAGGAAGAAGAAGCTCAGCAACAGGTA
ATCGTTCGCCGTGGATCGGCCGGTGAACGACGTTTCAGACCTAGATCATG
GTCTGAGTGAATGACACGTTATTTGTCCGAAGTGTCCGGTTATTACGGTT
GTCAGTGGAAACCAAAAAACAACATGGCAGCACACAAAGAGAAATCATAC
CACCAGATGACTGAAATCTTACAACAACGTGAAACAGATTGTCGCCGTTT
GCGTTTGAGTAGTTTATTCGAGACTATGCCGAAAAATGATATACATATCG
AGGGTTACTCGCCGTCAGCCGTACGTAAATTACGCGCAAAGACAGTACCA
CCACTGCAGAACATTTACGAAGATACGATATTCTATCCTAGCAACTGGAC
TTCACCGTCACTCACTAAAAAACAACGCCGTGAGAGAATGAACAAAAGGG
CCGCATCCAAAAAGCCAGTCATTGCAATAATTGATGAAAACAATAACAAT
AATAATAATGGATTTATGAAAAAGAACACTGCGGCCGCATTGCGCATGAC
TGAAAAATTCGAAACAAAATACCATTCACCTCAGTTAAAACGTAAAGCGT
TTGGAAAACATAATTTGATTCCATTACCTGAGGAAAAGATCACTCGCTCC
TTTGATGAAAGCGTTATTGAGGAGACGGACGAGGAGGAAGAAGAAGCTCA
GCAACAGGTAATCGTTCGCCGTGGATCGGCCGGTGAACGACGTTTCAGAC
CTAGATCATGGTCTGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040737XLOC_040737-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000055_pilongenomesc0000055_pilon:1546220..1546879 -
Properties
Property NameValue
Aaloc340-657:319
Aaloc1-339:661