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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000073_pilon:43182..49644- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040733 ID=XLOC_040733|Name=XLOC_040733|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6463bp|location=Sequence derived from alignment at sc0000073_pilon:43182..49644- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGATATCTTTTCGGCTGCTAGAGAAGGAAATGTTAAATTTGTCCG
AACCTTTCTTGAAAACATTGAGAATGATTTGAATGAAGGGTAAGTACTTT
TGAATTTTATCTGATCCTGTTTAGAAATGTATAGCTTAAGTTGTGTTGTT
GTTGTTATCCAACTCAAAAAAGATGGTGTTCTGATTATTGCAAAGGAAAT
ATTTTCCCTTGATATAAAAATTAAACAAAATTTCAAAGTACTGTATATAT
TGTATTTCTGTATTATTGACATAAGTTAGCTAAGTTATAAATTGATCCTT
ATATTCTGACCAACTCGTACATTATTTCATATTAGTGATGATCATGGATT
TACACCTTTGCATTGGGCATGTAGAGAAGGTCAAATGGTTGTTTTTGAAA
TGTTGATGGCAAGAGGGGCACGTCATAGTGCTAGAAACGATGGAGGGGAT
ACACCTTTACATTTAGCTGCAGCTCATGGTAATAAAGACATTGTAATCAA
GGCAAGTCATTTTTGGGTTTTCTTTTATGTACAAAAATCATAATTGGCTG
TATATGATATGCTATTTATAGGCAAAGGCTATTCTTTAGGTAATTGGGTT
TTACTTTATTTATGCTGTTTCGGTAAAAAGAACCTAAAATAATCTGTTCT
GAAAAAGATTATACACCTGAATACAGCTGAACATCTTATTTCTCACTACA
AAGTTTCATGTGAAATGCTTTTTATTTCAATGAAATTATTTTCTATTTTT
AAATGATAGCTTTTGCAACACAAAGCCAATGTCAATTTAATGAATGAACA
TGGAAATACGCCATTGCATTATGCTTGTTTTTGGAACATGGAAGGAATAG
CTGTGGTATGTTTTTTTTCTTTTTTTTTCACTCAATAAGCTAGCATGACA
ACAAATTTATGTCACATGTGTTTGTTTTTAAGGAACTGGTAAATAAAGGA
GCTCATGTATCACAGTGTAACCGATACGATGAAACACCCCTCGATAAAGC
TACTCAATTTGTAAAAAATCTGTTGAGGGGTAAGCAGAACTTTCTTTCGT
TGAATTATTTTCAAATATTATATATAAGGAGATGTTATATGGAATAAAAC
CCCACATTTTTCTATTTTTTATAGCAATAGTTTAAAATGGTTAAGGGAAA
TGTTTTCAAGAGAGTAAAAGTGGGGGTTAGAGTGTAAGCATTTTTCTAAG
CCAAGTCTTTTAACCTTTCTGGTATGGCAGTAGGAAAGATCTAAAGAGGT
CTAAAGATTTTCTTAATACCTTTGCTTACTATGAAATTGAAGTAGTTTTT
TGAAGAGAATACCAACTATTGGCTATTGATCTACTCAAAAGTGGATACAA
TCATTTTAAAATGCAAGAAATTTATAAATAAGGATGGTAGAACAGTGGTC
CGAATATTTATGAATTTTTTGACTGGGATTTCTGGTTAATTGAATTTAAA
ATCGAGGCTTTTTTAAAGCCTACAGTATCTAAAAAGATACCGATCTTTAG
AATAATTTAATTTTTTGTTACAGATAAAGCGAAACAAGGAGGACAAAAAT
TAGAAAGGAAACCTTTTGAAGGTAAGCAAATATTTCGTGAATAGTTGATT
GGTGATGGAGCCTAAGCTTTTCCAGTCAGCCAGATCAGAAAAAGTGTTTT
TTCTTGATTTTCCTAAGATTTTCTCATTAGTTTTTCTCGTTTATTTTAAA
TTTAATAATGTTTTCTGATGACTAACTGGATAGGTACATAAAAGTATCAC
TTGTTTAATTCTAAACTTAATTTGAATTTAATTTTTTTCCATCTTTTTCT
TTTCAGAACCAAAAGGTCTTCAAAATAGCAGTAAGTGTTCTTGTTTCAAC
TATTTTTGAAAACATTTTTCAGGTTTTCTCTAAATTGGTATCAACAGAAA
TTACTTCACTGTAAAAAAAAAGGATTTGATCAACAATTTGGATGATAAAT
GTTTGTATTTAGATTATGATTATTCGACGTTGAGAGGAGGAAGCACTGGT
ATAGACATCAATGAGATCCACCTGATGGAACGCATCAGTGAAAGTGTCAG
TGGAGAGGTAAATCACTCTCTTATAAGAATTGAAAACAATCGGGAAGAGA
CGAGACAATGCTATCTTGAGTATTATGACATGCATATTTTAGCGATTTGT
AAATTTTGCGTCCAAATGTGACCGTTTTGTAATTTTTTGGAGTTAATTTT
CATTTAGCTTTTCAAAGGTGTTTGGAACAATGCGCCAATTGTTGCGAAGA
AGTTGAAAATATATGGAATACACAAGCGATTGGATCTTCACTTTAATGAA
GAATACCCCCGTCTTAGGTAATTTTTAATTTTTGGACCTACCCCGGTGGA
GGTCCTATAAATTACCCATGTTCGTTCCTGCGTGCGTGTGTTTGTGCGTT
TGTTAGTTACCAGCTTTTCTCGAGATTGGCTCTTTCACTCTTTATGAATT
TTTGCACAAAGATGCATAACTATAAACGAATGTGACAGAGCTTGATTTTC
GGGAAAATTTTTTGTGGTAAATTTCAAGGGTTTTTGGACTTTCTGAACTA
TTGGATCTTTTTTTTCTTGTTCTTAGCCAAATTACTCAAATTATTGATGA
GATAGATGTTCTTTTTGCTCGCGAAGTCTTGAATATGAAAGAATATTTGT
GTTTGAGCATGAAATTTTGGTTTCTAAACGTTTTTTTATAAGAAACAAAC
GACTAATTTTAATCGATTGTCACTATTTGTGTTCTGAATGATTGTTTGAT
AACGGTCATGCTCACGTAGATATCAATTACATATGTGTTAAATGCATAAC
GAGGTAGGTCCATAAAAGTATCGCTTGTTATTACATGCTTCAAATGCCAA
ATTTCTTAATTGTTTCTAATATTTCATTGGTCTATTTGTTTTGCAGGATA
TTTTCCCACCCGAATATTTTGCCAGTGATCAATGCAGTAACTAAGCAACC
CAACCTTATGGTCATCAGTCAGTTCATGCCGTATGGTTCTTTATACGACG
TCTTGCACGAAGGATCAGGTATCTACTTCATATTCACCACACCTCTCCAA
TATGTTTACAAAACTTAGATCAAAGATTTTATTCTTTGGGTGTTTTCTAT
TTATTCAGGTATTATGTTGGACCAGGCACAAATTATCAAATTTGCTTTCG
ACATTGCAAAGGGGATGGCATACTTTCACAGTTTAGAACCACTCATCCAA
AAATATCATCTCAACAGTTTTCACATAATGGTATACGAAGTTTTATTACT
ACGAATATTTACAAATCATTAGAAAATCTAAGATATATGCACAACATTAA
ATTCAACTTTAAACTTTGTCATGAAATTTATTTCGACAGGTTGACGAAGA
CTTGACGGCACGAATCAGTATGCCTGACGTTCGATATTCCTTCCAAGACA
CTACAAAAGTACAAGCACCCAACTGGATGTCTCCTGAAAGTAATGCATTT
CAGTATTTTAGTTCATATTGCACATTTCTTGTGGTTTTCACTGCTTTTTA
GAGACACTTCTTCCATTTTTTGAAAAAGACCTTGGTATTAATTGTACCAG
ATTGTACAAATGTTTCTTTCTTAAGATTTTGAAAACAAAAGAAACAAAAC
TTATTTTGAACATCTTATTTTCAGTGTTACGACTGAATCCGGCATCAGTT
GAACAACGTTCAGCTGATATGTGGAGTTTTGCGATTGTCATGTGGGAATT
AGCGACACGAGAAGTTCCTTACTCGTCACTATCACCCATGGAATGTGGAA
TGAAGGTAAGGTTATTTTGCTGTATTGAGAGAGGAGCAATGCTTCCATCT
TTCCACAAAGTGCGCAGGAAGTTTGGTGAGCTTCGACCAGCTTTCAATTT
CATCAAATAATCCTCTTTGCTGTCGACATATTTTCAGCAAAACGATTTCA
GCTTTGAAATATTTAGCTATACTTGCTATGGCGACAGCAGAAGCCGTTTT
CACCATGTCATCTTCATTCTCCATCAAGGAGCACAAAATGTCTAAAAAAT
TCGCTTCGGTGAACGCGGCTCTCATACCATGACAATAAAGAGAGATGCTG
GCCACATGGTCAGCTGCTGTCGCCATGATATCTCCGTCCTGGTGGTGGAG
CAGGTCGAACAGTAATTGCAGACCTTCCATTATTGTGTATGTTGGCGATG
TATTCAGGATATGGTCTTTCAAAACTATCATCTGAAATGCTGAGTCCACT
TTCATTTTCGAATCTTCAATATTATTGAAGAAATGGATGGGTAATTTGAA
GTTTCTGATAGCTTTGTATTCTTTATCCAAGAGAAATTGAGTTAAGATTT
CACATGCCTTGAATCGGATAGATGGCTGTGTATGTGAAAGATATCTCATT
ACTGCACTAGGTGGAAAGCTACCAAACTTCTTCATTATTCGGATGCCATC
TTTATTCTCGAAAAGTAAGCAAGCAATCGTTTGGTACACCTCCAGTTCAA
TTACCGGTTTCTCCGACTTGATTGCTACTTGCAAAATAATGTTGATACTA
TTCTTCTCCAGCGCGATCTTCTGTATAGTTTTGTTGGGAATGTTCGCACT
ACGTATACACAATTTTTGCATGGTTTTCAAGGCACTGGTCAACATTTCGT
CTGCCATTAAGAACGATTTCAAACTAGAATTCAACAAGTGTAAAAATATG
TTTGAGCCCACCTCATCGGAGAGTGTGTAACTGGCCATCCTTAGAAGCAC
ATTGAAGAATTCACCACCATAGTATTGTAGAACAGTGGACGAATTGCTTG
TGGTGAGGTTGACGATGTATTGCATGGGAAGACTTTTAGCCACGATCATG
GTTTGTCGGTGCTCCCCACCAGCGATGGACCACAAAGCCCTCATGATCCA
TTCTTGCGATTCGTCTTTCTTCATCTTTTTCATTTGCTTCAACAACTCTG
CGATGGAACCACTCTCCATGAAATAAAGTTGCAGTTGTTTGTTCTTCAGT
GTGCTTGTGTAGATCACTTTGCAAACTTCTTTTAGAGTACCTTTTGTGTG
CATGCATGGCTGCAAAATATCGAAAATTTTTATCGAAATTAGTTTCATCT
GAATCGAACTACTCTCGTAAATGTAAAAGCGAAGAGTTTTCAAGGAAACG
ATTTGAAGCTCTTGATTTTCAGTTTTCTTTAACGTGTCAACAACGATGTT
CAGCAAACGGTTGTTTTGATCAAAGAACGATTGCATTGTTTCATTACCCT
TCAGAGATTTCAGGATGATTTCGAAGGAAGAAATTAAGAAATACTCGTCT
GTCGTCATTTCCATGAACTTGATTATGCGGAAAAAATTGTTCCGTTCCCT
CATTTTATTGGAAAAATCCTCTGCAAACCTTTGACAGCATTTTAGTATGG
TGAGAATGGTTGTCGAGATTTCTCTTTCTTTGAGGTTCTCCAATCGTTCA
GCTAAGATATCAATGATGTTGGCTTTGCTTAGCACTGTGTACGTCTCCTG
CTCGTTTTTGATTAATGTCTTTTCGATCAATTGCGTCAACATCAGTTCCA
TTTCAGGTTTGTCTTCGACTAATTCTGCTTTGTAAAGTTGTATGGTTTGC
TTGAAAAGAGTATCTACGTTTTCTTTATCGCATCCAGAACTTTTTGAAGT
CATTTCAACAAAGATCTGTAAAGAAACCATCTTCAGGTTTTCGTTCAAAT
TATCAGTGGAAATGTACTCGAACAAACGTTGCCATACCATTTCATAAAGG
TGCTCATAATTGTTGTTGATGATGTAGAGAAGAAGTTTGTTCTGGTGATT
AATGAATGCGATGTCGATGATATCATTTTCATCCACATCCACCACTGTAA
TGTCTGTATTATACATCAACAAAACGCCCACTGTCTCTATGTGTCCCTCT
GCAAAAGCCAACCATAATGGCGTCACTTTCATTTCATCTTGAGTTTTTAC
CTCTAATCGTGACGGTTTGTTTTCGACCAGTCGGTTGACGGTTTTGAAGA
AGCCTTCGTATGCTGCATAATGCAAAGGCGTCCACCCTTTGTCGTCATGT
TCCTCTAATTCAAATTTGTCGTTTGTTGCTTTTTCTACACCACTATTACT
ACTGCCAGCCATCATTTCATTCTCATATCTTCGGTTTTTACTTTTATCAA
ATCGAAAACACACATAGTGAGTCAGCAGTGAGAGACGATAGATTATTAAC
TGTTTTCTTCAACAATATTTTATAGAGAAAAAGTTGATAATTGCTTGCTG
TGTAATTGAATGTTCTTTTGAAGTATTTCCGCTTCTACAACACCCTCAGG
ACCATTTGAAAATTATTTTCTAATCGCTTTGTGAAAATATGATAAAATTG
TCTCTTTTTCGATTTTTAGATCGCGACGGAAGGATGTCGTCCACCTTTAC
AACCGGGGATGCCACCGCAACTAAGCAAGTTGATATCACTTTGTTGGAAT
GCTGACCCCACAAAACGACCTCGATTCGACCAGATCATGCCCATCTTGCA
GAAAATGTTATAG Coding sequence (CDS) from alignment at sc0000073_pilon:43182..49644- >XLOC_040733 ID=XLOC_040733|Name=XLOC_040733|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2688bp|location=Sequence derived from alignment at sc0000073_pilon:43182..49644- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGATATCTTTTCGGCTGCTAGAGAAGGAAATGTTAAATTTGTCCG
AACCTTTCTTGAAAACATTGAGAATGATTTGAATGAAGGATGGAAGATAT
CTTTTCGGCTGCTAGAGAAGGAAATGTTAAATTTGTCCGAACCTTTCTTG
AAAACATTGAGAATGATTTGAATGAAGGTGATGATCATGGATTTACACCT
TTGCATTGGGCATGTAGAGAAGGTCAAATGGTTGTTTTTGAAATGTTGAT
GGCAAGAGGGGCACGTCATAGTGCTAGAAACGATGGAGGGGATACACCTT
TACATTTAGCTGCAGCTCATGGTAATAAAGACATTGTAATCAAGTGATGA
TCATGGATTTACACCTTTGCATTGGGCATGTAGAGAAGGTCAAATGGTTG
TTTTTGAAATGTTGATGGCAAGAGGGGCACGTCATAGTGCTAGAAACGAT
GGAGGGGATACACCTTTACATTTAGCTGCAGCTCATGGTAATAAAGACAT
TGTAATCAAGCTTTTGCAACACAAAGCCAATGTCAATTTAATGAATGAAC
ATGGAAATACGCCATTGCATTATGCTTGTTTTTGGAACATGGAAGGAATA
GCTGTGCTTTTGCAACACAAAGCCAATGTCAATTTAATGAATGAACATGG
AAATACGCCATTGCATTATGCTTGTTTTTGGAACATGGAAGGAATAGCTG
TGGAACTGGTAAATAAAGGAGCTCATGTATCACAGTGTAACCGATACGAT
GAAACACCCCTCGATAAAGCTACTCAATTTGTAAAAAATCTGTTGAGGGG
AACTGGTAAATAAAGGAGCTCATGTATCACAGTGTAACCGATACGATGAA
ACACCCCTCGATAAAGCTACTCAATTTGTAAAAAATCTGTTGAGGGATAA
AGCGAAACAAGGAGGACAAAAATTAGAAAGGAAACCTTTTGAAGATAAAG
CGAAACAAGGAGGACAAAAATTAGAAAGGAAACCTTTTGAAGAACCAAAA
GGTCTTCAAAATAGCAAACCAAAAGGTCTTCAAAATAGCAATTATGATTA
TTCGACGTTGAGAGGAGGAAGCACTGGTATAGACATCAATGAGATCCACC
TGATGGAACGCATCAGTGAAAGTGTCAGTGGAGAGATTATGATTATTCGA
CGTTGAGAGGAGGAAGCACTGGTATAGACATCAATGAGATCCACCTGATG
GAACGCATCAGTGAAAGTGTCAGTGGAGAGCTTTTCAAAGGTGTTTGGAA
CAATGCGCCAATTGTTGCGAAGAAGTTGAAAATATATGGAATACACAAGC
GATTGGATCTTCACTTTAATGAAGAATACCCCCGTCTTAGCTTTTCAAAG
GTGTTTGGAACAATGCGCCAATTGTTGCGAAGAAGTTGAAAATATATGGA
ATACACAAGCGATTGGATCTTCACTTTAATGAAGAATACCCCCGTCTTAG
GATATTTTCCCACCCGAATATTTTGCCAGTGATCAATGCAGTAACTAAGC
AACCCAACCTTATGGTCATCAGTCAGTTCATGCCGTATGGTTCTTTATAC
GACGTCTTGCACGAAGGATCAGGATATTTTCCCACCCGAATATTTTGCCA
GTGATCAATGCAGTAACTAAGCAACCCAACCTTATGGTCATCAGTCAGTT
CATGCCGTATGGTTCTTTATACGACGTCTTGCACGAAGGATCAGGTATTA
TGTTGGACCAGGCACAAATTATCAAATTTGCTTTCGACATTGCAAAGGGG
ATGGCATACTTTCACAGTTTAGAACCACTCATCCAAAAATATCATCTCAA
CAGTTTTCACATAATGGTATTATGTTGGACCAGGCACAAATTATCAAATT
TGCTTTCGACATTGCAAAGGGGATGGCATACTTTCACAGTTTAGAACCAC
TCATCCAAAAATATCATCTCAACAGTTTTCACATAATGGTTGACGAAGAC
TTGACGGCACGAATCAGTATGCCTGACGTTCGATATTCCTTCCAAGACAC
TACAAAAGTACAAGCACCCAACTGGATGTCTCCTGAAAGTTGACGAAGAC
TTGACGGCACGAATCAGTATGCCTGACGTTCGATATTCCTTCCAAGACAC
TACAAAAGTACAAGCACCCAACTGGATGTCTCCTGAAATGTTACGACTGA
ATCCGGCATCAGTTGAACAACGTTCAGCTGATATGTGGAGTTTTGCGATT
GTCATGTGGGAATTAGCGACACGAGAAGTTCCTTACTCGTCACTATCACC
CATGGAATGTGGAATGAAGTGTTACGACTGAATCCGGCATCAGTTGAACA
ACGTTCAGCTGATATGTGGAGTTTTGCGATTGTCATGTGGGAATTAGCGA
CACGAGAAGTTCCTTACTCGTCACTATCACCCATGGAATGTGGAATGAAG
ATCGCGACGGAAGGATGTCGTCCACCTTTACAACCGGGGATGCCACCGCA
ACTAAGCAAGTTGATATCACTTTGTTGGAATGCTGACCCCACAAAACGAC
CTCGATTCGACCAGATCATGCCCATCTTGCAGAAAATGTTATAGATCGCG
ACGGAAGGATGTCGTCCACCTTTACAACCGGGGATGCCACCGCAACTAAG
CAAGTTGATATCACTTTGTTGGAATGCTGACCCCACAAAACGACCTCGAT
TCGACCAGATCATGCCCATCTTGCAGAAAATGTTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000073_pilon | genome | sc0000073_pilon:43182..49644 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1201-1344:145 |
| Aaloc | 1072-1200:2838 |
| Aaloc | 970-1068:3125 |
| Aaloc | 850-969:3354 |
| Aaloc | 727-846:3567 |
| Aaloc | 616-723:4257 |
| Aaloc | 523-615:4500 |
| Aaloc | 499-519:4656 |
| Aaloc | 451-495:4939 |
| Aaloc | 352-447:5532 |
| Aaloc | 256-351:5705 |
| Aaloc | 91-255:6128 |
| Aaloc | 1-87:6464 |
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